RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 MRGPRX1Q96LB2 322 aa13.65□□□□□ -0.22
CASC4-208ENST00000559151 SGCZQ96LD1 299 aa13.65□□□□□ -0.22
CASC4-208ENST00000559151 SLC38A3Q99624 504 aa13.65□□□□□ -0.22
CASC4-208ENST00000559151 MYOCQ99972 504 aa13.65□□□□□ -0.22
CASC4-208ENST00000559151 C11orf54Q9H0W9 315 aaPredicted RBP13.65□□□□□ -0.22
CASC4-208ENST00000559151 MRPL46Q9H2W6 279 aaKnown RBP13.65□□□□□ -0.22
CASC4-208ENST00000559151 IL23AQ9NPF7 189 aa13.65□□□□□ -0.22
CASC4-208ENST00000559151 CNNM1Q9NRU3 951 aa13.65□□□□□ -0.22
CASC4-208ENST00000559151 SNX13Q9Y5W8 968 aa13.65□□□□□ -0.22
CASC4-208ENST00000559151 SLC4A7Q9Y6M7 1214 aa13.65□□□□□ -0.22
CASC4-208ENST00000559151 NPIPB6E9PJ23 425 aa13.64□□□□□ -0.23
CASC4-208ENST00000559151 MYO1FO00160 1098 aa13.64□□□□□ -0.23
CASC4-208ENST00000559151 MATN2O00339 956 aa13.64□□□□□ -0.23
CASC4-208ENST00000559151 AHSGP02765 367 aa13.64□□□□□ -0.23
CASC4-208ENST00000559151 FLT3LGP49771 235 aa13.64□□□□□ -0.23
CASC4-208ENST00000559151 GZMKP49863 264 aa13.64□□□□□ -0.23
CASC4-208ENST00000559151 FAM47AQ5JRC9 791 aa13.64□□□□□ -0.23
CASC4-208ENST00000559151 ZNF648Q5T619 568 aaPredicted RBP13.64□□□□□ -0.23
CASC4-208ENST00000559151 KIAA1586Q9HCI6 787 aa13.64□□□□□ -0.23
CASC4-208ENST00000559151 TEX33O43247 280 aa13.63□□□□□ -0.23
CASC4-208ENST00000559151 SLC26A4O43511 780 aa13.63□□□□□ -0.23
CASC4-208ENST00000559151 SBK3P0C264 359 aa13.63□□□□□ -0.23
CASC4-208ENST00000559151 CASP5P51878 434 aa13.63□□□□□ -0.23
CASC4-208ENST00000559151 NPEPPSP55786 919 aa13.63□□□□□ -0.23
CASC4-208ENST00000559151 TSHZ1Q6ZSZ6 1077 aa13.63□□□□□ -0.23
CASC4-208ENST00000559151 RIPOR3Q96MK2 946 aa13.63□□□□□ -0.23
CASC4-208ENST00000559151 PTPRHQ9HD43 1115 aa13.63□□□□□ -0.23
CASC4-208ENST00000559151 SLC23A1Q9UHI7 598 aa13.63□□□□□ -0.23
CASC4-208ENST00000559151 B4GALT4O60513 344 aa13.62□□□□□ -0.23
CASC4-208ENST00000559151 SLURP1P55000 103 aa13.62□□□□□ -0.23
CASC4-208ENST00000559151 C1orf228Q6PIY5 440 aa13.62□□□□□ -0.23
CASC4-208ENST00000559151 ACRBPQ8NEB7 543 aa13.62□□□□□ -0.23
CASC4-208ENST00000559151 OGDHLQ9ULD0 1010 aa13.62□□□□□ -0.23
CASC4-208ENST00000559151 UBE2QL1A1L167 161 aa13.61□□□□□ -0.23
CASC4-208ENST00000559151 TBX3O15119 743 aa13.61□□□□□ -0.23
CASC4-208ENST00000559151 GRM6O15303 877 aa13.61□□□□□ -0.23
CASC4-208ENST00000559151 BRAFP15056 766 aa13.61□□□□□ -0.23
CASC4-208ENST00000559151 CREMQ03060 361 aa13.61□□□□□ -0.23
CASC4-208ENST00000559151 RIN1Q13671 783 aa13.61□□□□□ -0.23
CASC4-208ENST00000559151 TNPO1Q92973 898 aaKnown RBP13.61□□□□□ -0.23
CASC4-208ENST00000559151 CXorf49A8MYA2 514 aaPredicted RBP13.6□□□□□ -0.23
CASC4-208ENST00000559151 B4GALT3O60512 393 aa13.6□□□□□ -0.23
CASC4-208ENST00000559151 SETSIPP0DME0 302 aa13.6□□□□□ -0.23
CASC4-208ENST00000559151 PIK3CGP48736 1102 aa13.6□□□□□ -0.23
CASC4-208ENST00000559151 MRPL49Q13405 166 aaKnown RBP13.6□□□□□ -0.23
CASC4-208ENST00000559151 CNGA2Q16280 664 aa13.6□□□□□ -0.23
CASC4-208ENST00000559151 CIAPIN1Q6FI81 312 aa13.6□□□□□ -0.23
CASC4-208ENST00000559151 OTUD7BQ6GQQ9 843 aa13.6□□□□□ -0.23
CASC4-208ENST00000559151 OR2C3Q8N628 320 aa13.6□□□□□ -0.23
CASC4-208ENST00000559151 MRI1Q9BV20 369 aa13.6□□□□□ -0.23
CASC4-208ENST00000559151 ZNF287Q9HBT7 754 aa13.6□□□□□ -0.23
CASC4-208ENST00000559151 SLAMF7Q9NQ25 335 aa13.6□□□□□ -0.23
CASC4-208ENST00000559151 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.6□□□□□ -0.23
CASC4-208ENST00000559151 CPNE7Q9UBL6 633 aa13.6□□□□□ -0.23
CASC4-208ENST00000559151 ABHD14A-ACY1A0A1B0GW23 586 aa13.59□□□□□ -0.23
CASC4-208ENST00000559151 STC2O76061 302 aa13.59□□□□□ -0.23
CASC4-208ENST00000559151 HDCP19113 662 aa13.59□□□□□ -0.23
CASC4-208ENST00000559151 FMO1Q01740 532 aa13.59□□□□□ -0.23
CASC4-208ENST00000559151 EXOSC9Q06265 439 aaKnown RBP13.59□□□□□ -0.23
CASC4-208ENST00000559151 ATP2B3Q16720 1220 aa13.59□□□□□ -0.23
CASC4-208ENST00000559151 FAM214AQ32MH5 1076 aa13.59□□□□□ -0.23
CASC4-208ENST00000559151 GRAMD1BQ3KR37 738 aa13.59□□□□□ -0.23
CASC4-208ENST00000559151 PABPC1LQ4VXU2 614 aaKnown RBP13.59□□□□□ -0.23
CASC4-208ENST00000559151 SHCBP1Q8NEM2 672 aa13.59□□□□□ -0.23
CASC4-208ENST00000559151 SLC35B2Q8TB61 432 aa13.59□□□□□ -0.23
CASC4-208ENST00000559151 P2RX7Q99572 595 aaKnown RBP13.59□□□□□ -0.23
CASC4-208ENST00000559151 C12orf65Q9H3J6 166 aaKnown RBP13.59□□□□□ -0.23
CASC4-208ENST00000559151 PIH1D1Q9NWS0 290 aaKnown RBP13.59□□□□□ -0.23
CASC4-208ENST00000559151 SIDT1Q9NXL6 827 aaKnown RBP13.59□□□□□ -0.23
CASC4-208ENST00000559151 ISM1B1AKI9 464 aa13.58□□□□□ -0.24
CASC4-208ENST00000559151 CNOT4O95628 575 aaKnown RBP13.58□□□□□ -0.24
CASC4-208ENST00000559151 ATP5JP18859 108 aa13.58□□□□□ -0.24
CASC4-208ENST00000559151 SUMO3P55854 103 aaPredicted RBP13.58□□□□□ -0.24
CASC4-208ENST00000559151 SOX8P57073 446 aa13.58□□□□□ -0.24
CASC4-208ENST00000559151 PTH1RQ03431 593 aa13.58□□□□□ -0.24
CASC4-208ENST00000559151 ZNF543Q08ER8 600 aa13.58□□□□□ -0.24
CASC4-208ENST00000559151 STK3Q13188 491 aa13.58□□□□□ -0.24
CASC4-208ENST00000559151 DHX8Q14562 1220 aaKnown RBP13.58□□□□□ -0.24
CASC4-208ENST00000559151 FAM83BQ5T0W9 1011 aa13.58□□□□□ -0.24
CASC4-208ENST00000559151 OGFOD2Q6N063 350 aa13.58□□□□□ -0.24
CASC4-208ENST00000559151 SEM1Q6ZVN7 128 aa13.58□□□□□ -0.24
CASC4-208ENST00000559151 DPP9Q86TI2 863 aa13.58□□□□□ -0.24
CASC4-208ENST00000559151 SESTD1Q86VW0 696 aa13.58□□□□□ -0.24
CASC4-208ENST00000559151 TMEM151BQ8IW70 566 aa13.58□□□□□ -0.24
CASC4-208ENST00000559151 ENAHQ8N8S7 591 aaPredicted RBP13.58□□□□□ -0.24
CASC4-208ENST00000559151 AGO3Q9H9G7 860 aaKnown RBP13.58□□□□□ -0.24
CASC4-208ENST00000559151 TCRBV7S2A1N4TA0A589 114 aa13.57□□□□□ -0.24
CASC4-208ENST00000559151 KIAA0391O15091 583 aaKnown RBP13.57□□□□□ -0.24
CASC4-208ENST00000559151 MATN4O95460 622 aa13.57□□□□□ -0.24
CASC4-208ENST00000559151 RPL17P18621 184 aaKnown RBP13.57□□□□□ -0.24
CASC4-208ENST00000559151 TNFSF4P23510 183 aa13.57□□□□□ -0.24
CASC4-208ENST00000559151 RAC3P60763 192 aa13.57□□□□□ -0.24
CASC4-208ENST00000559151 CHAF1AQ13111 956 aaPredicted RBP13.57□□□□□ -0.24
CASC4-208ENST00000559151 CCDC93Q567U6 631 aa13.57□□□□□ -0.24
CASC4-208ENST00000559151 DACT2Q5SW24 774 aa13.57□□□□□ -0.24
CASC4-208ENST00000559151 FAM124AQ86V42 546 aa13.57□□□□□ -0.24
CASC4-208ENST00000559151 BHLHE22Q8NFJ8 381 aaPredicted RBP13.57□□□□□ -0.24
CASC4-208ENST00000559151 DEPTORQ8TB45 409 aa13.57□□□□□ -0.24
CASC4-208ENST00000559151 DPYSL5Q9BPU6 564 aa13.57□□□□□ -0.24
CASC4-208ENST00000559151 A0A1W2PRX2 142 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms