RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 BADQ92934 168 aa17.16■□□□□ 0.34
CDC42BPB-204ENST00000559043 CDT1Q9H211 546 aa17.16■□□□□ 0.34
CDC42BPB-204ENST00000559043 FAM207AQ9NSI2 230 aaPredicted RBP17.16■□□□□ 0.34
CDC42BPB-204ENST00000559043 KRT86O43790 486 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 IPO7O95373 1038 aaKnown RBP17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 LCA5LO95447 670 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 NR3C1P04150 777 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 EPHB4P54760 987 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 MCL1Q07820 350 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 BMS1Q14692 1282 aaKnown RBP17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 TMCO3Q6UWJ1 677 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 CRELD2Q6UXH1 353 aaPredicted RBP17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 KIAA1328Q86T90 577 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 TRIM59Q8IWR1 403 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 TMEM192Q8IY95 271 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 JAKMIP2Q96AA8 810 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 TCHPQ9BT92 498 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 EPC1Q9H2F5 836 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 MMRN2Q9H8L6 949 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 GOLGA8IPA6NC78 632 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 GOLGA8JA6NMD2 632 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 CLDN3O15551 220 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 MEFVO15553 781 aaPredicted RBP17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 ACRP10323 421 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 AXLP30530 894 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 CYP2J2P51589 502 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 TMEM132AQ24JP5 1023 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 CCDC40Q4G0X9 1142 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 NOTUMQ6P988 496 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 MPZL3Q6UWV2 235 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 HS2ST1Q7LGA3 356 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 KRT222Q8N1A0 295 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 POMGNT1Q8WZA1 660 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 SAAL1Q96ER3 474 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 ADAM2Q99965 735 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 HSPBP1Q9NZL4 362 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 ARHGAP20Q9P2F6 1191 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 MYO6Q9UM54 1294 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 HES2Q9Y543 173 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 FHOD1Q9Y613 1164 aa17.15■□□□□ 0.34
CDC42BPB-204ENST00000559043 TNRC18O15417 2968 aaPredicted RBP17.14■□□□□ 0.33
CDC42BPB-204ENST00000559043 RCCD1A6NED2 376 aa17.14■□□□□ 0.33
CDC42BPB-204ENST00000559043 ZNF263O14978 683 aa17.14■□□□□ 0.33
CDC42BPB-204ENST00000559043 ATP8B1O43520 1251 aa17.14■□□□□ 0.33
CDC42BPB-204ENST00000559043 HARSP12081 509 aaKnown RBP17.14■□□□□ 0.33
CDC42BPB-204ENST00000559043 VAV2P52735 878 aa17.14■□□□□ 0.33
CDC42BPB-204ENST00000559043 ADAM9Q13443 819 aa17.14■□□□□ 0.33
CDC42BPB-204ENST00000559043 ZNF568Q3ZCX4 644 aa17.14■□□□□ 0.33
CDC42BPB-204ENST00000559043 TRAPPC11Q7Z392 1133 aa17.14■□□□□ 0.33
CDC42BPB-204ENST00000559043 C12orf56Q8IXR9 622 aa17.14■□□□□ 0.33
CDC42BPB-204ENST00000559043 NEK11Q8NG66 645 aa17.14■□□□□ 0.33
CDC42BPB-204ENST00000559043 CCDC42Q96M95 316 aa17.14■□□□□ 0.33
CDC42BPB-204ENST00000559043 PARD6BQ9BYG5 372 aa17.14■□□□□ 0.33
CDC42BPB-204ENST00000559043 LACRTQ9GZZ8 138 aa17.14■□□□□ 0.33
CDC42BPB-204ENST00000559043 CXCL16Q9H2A7 254 aa17.14■□□□□ 0.33
CDC42BPB-204ENST00000559043 CHST12Q9NRB3 414 aa17.14■□□□□ 0.33
CDC42BPB-204ENST00000559043 CALUO43852 315 aaPredicted RBP17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 NPTXRO95502 500 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 GARTP22102 1010 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 NR2F2P24468 414 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 TNFSF9P41273 254 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 ACOT2P49753 483 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 NFIL3Q16649 462 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 PAPD7Q5XG87 772 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 SLC27A1Q6PCB7 646 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 SLC9A9Q8IVB4 645 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 RDH13Q8NBN7 331 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 SMG8Q8ND04 991 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 TMEM174Q8WUU8 243 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 TSGA10Q9BZW7 698 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 RNF39Q9H2S5 420 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 PUF60Q9UHX1 559 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 AGO2Q9UKV8 859 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 TFR2Q9UP52 801 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 LRRC53A6NM62 1247 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 MEIS3P2A8K0S8 358 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 ENPP3O14638 875 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 AKAP3O75969 853 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 PARNO95453 639 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 PLEKP08567 350 aaPredicted RBP17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 WNT7BP56706 349 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 OSTNP61366 133 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 SNRPFP62306 86 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 SPA17Q15506 151 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 TWF2Q6IBS0 349 aaKnown RBP17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 SLFN12LQ6IEE8 588 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 PDXDC1Q6P996 788 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 CBWD2Q8IUF1 395 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 THNSL1Q8IYQ7 743 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 FBXL18Q96ME1 805 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 MSTO1Q9BUK6 570 aa17.13■□□□□ 0.33
CDC42BPB-204ENST00000559043 LAMA2P24043 3122 aaKnown RBP17.12■□□□□ 0.33
CDC42BPB-204ENST00000559043 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.12■□□□□ 0.33
CDC42BPB-204ENST00000559043 NOL4O94818 638 aa17.12■□□□□ 0.33
CDC42BPB-204ENST00000559043 PNMA6AP0CW24 399 aaPredicted RBP17.12■□□□□ 0.33
CDC42BPB-204ENST00000559043 MATR3P43243 847 aaKnown RBP eCLIP17.12■□□□□ 0.33
CDC42BPB-204ENST00000559043 RRAGAQ7L523 313 aa17.12■□□□□ 0.33
CDC42BPB-204ENST00000559043 TMEM199Q8N511 208 aa17.12■□□□□ 0.33
CDC42BPB-204ENST00000559043 MSANTD4Q8NCY6 345 aa17.12■□□□□ 0.33
CDC42BPB-204ENST00000559043 GOLGA5Q8TBA6 731 aa17.12■□□□□ 0.33
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