RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 HTRA4P83105 476 aaPredicted RBP13.49□□□□□ -0.25
GABPB1-208ENST00000558970 TFAMQ00059 246 aaKnown RBP13.49□□□□□ -0.25
GABPB1-208ENST00000558970 CYP24A1Q07973 514 aa13.49□□□□□ -0.25
GABPB1-208ENST00000558970 GRIK3Q13003 919 aa13.49□□□□□ -0.25
GABPB1-208ENST00000558970 KYAT1Q16773 422 aa13.49□□□□□ -0.25
GABPB1-208ENST00000558970 CCDC40Q4G0X9 1142 aa13.49□□□□□ -0.25
GABPB1-208ENST00000558970 Q7L0L9 218 aa13.49□□□□□ -0.25
GABPB1-208ENST00000558970 CMTR2Q8IYT2 770 aaKnown RBP13.49□□□□□ -0.25
GABPB1-208ENST00000558970 AOPEPQ8N6M6 819 aa13.49□□□□□ -0.25
GABPB1-208ENST00000558970 GSTCDQ8NEC7 633 aa13.49□□□□□ -0.25
GABPB1-208ENST00000558970 MRPL9Q9BYD2 267 aaKnown RBP13.49□□□□□ -0.25
GABPB1-208ENST00000558970 DMAC2Q9NW81 257 aa13.49□□□□□ -0.25
GABPB1-208ENST00000558970 PCDHA11Q9Y5I1 949 aa13.49□□□□□ -0.25
GABPB1-208ENST00000558970 PTPRJQ12913 1337 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 F8W810 466 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 TNNI1P19237 187 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 DNAJB2P25686 324 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 PSMC2P35998 433 aaKnown RBP13.48□□□□□ -0.25
GABPB1-208ENST00000558970 OR1G1P47890 313 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 DLG4P78352 724 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 FKBP3Q00688 224 aaKnown RBP13.48□□□□□ -0.25
GABPB1-208ENST00000558970 SOX4Q06945 474 aaPredicted RBP13.48□□□□□ -0.25
GABPB1-208ENST00000558970 TMEM132DQ14C87 1099 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 DCAF17Q5H9S7 520 aaPredicted RBP13.48□□□□□ -0.25
GABPB1-208ENST00000558970 TCERG1LQ5VWI1 586 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 PPP2R2DQ66LE6 453 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 FAM43BQ6ZT52 329 aaPredicted RBP13.48□□□□□ -0.25
GABPB1-208ENST00000558970 SLC9A9Q8IVB4 645 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 EFCAB13Q8IY85 973 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 PLEKHO2Q8TD55 490 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 HASPINQ8TF76 798 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 FBXL18Q96ME1 805 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 FNBP1Q96RU3 617 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 PAAF1Q9BRP4 392 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 C17orf80Q9BSJ5 609 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 FUCA2Q9BTY2 467 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 NRDE2Q9H7Z3 1164 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 KIAA1586Q9HCI6 787 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 CNTN3Q9P232 1028 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 PRG3Q9Y2Y8 225 aaPredicted RBP13.48□□□□□ -0.25
GABPB1-208ENST00000558970 ATG2AQ2TAZ0 1938 aa13.48□□□□□ -0.25
GABPB1-208ENST00000558970 LINC01553A4QN01 128 aa13.47□□□□□ -0.25
GABPB1-208ENST00000558970 IL18RAPO95256 599 aa13.47□□□□□ -0.25
GABPB1-208ENST00000558970 TMEM191BP0C7N4 346 aa13.47□□□□□ -0.25
GABPB1-208ENST00000558970 KRT13P13646 458 aa13.47□□□□□ -0.25
GABPB1-208ENST00000558970 CTNNB1P35222 781 aa13.47□□□□□ -0.25
GABPB1-208ENST00000558970 RAB30Q15771 203 aa13.47□□□□□ -0.25
GABPB1-208ENST00000558970 NFIL3Q16649 462 aa13.47□□□□□ -0.25
GABPB1-208ENST00000558970 ALKAL1Q6UXT8 129 aa13.47□□□□□ -0.25
GABPB1-208ENST00000558970 PPP1R10Q96QC0 940 aaKnown RBP13.47□□□□□ -0.25
GABPB1-208ENST00000558970 MTMR12Q9C0I1 747 aa13.47□□□□□ -0.25
GABPB1-208ENST00000558970 CWH43Q9H720 699 aa13.47□□□□□ -0.25
GABPB1-208ENST00000558970 KANSL3Q9P2N6 904 aa13.47□□□□□ -0.25
GABPB1-208ENST00000558970 SCN1AP35498 2009 aa13.47□□□□□ -0.25
GABPB1-208ENST00000558970 LRRIQ3A6PVS8 624 aaPredicted RBP13.46□□□□□ -0.25
GABPB1-208ENST00000558970 KRT19P08727 400 aa13.46□□□□□ -0.25
GABPB1-208ENST00000558970 ERCC5P28715 1186 aaPredicted RBP13.46□□□□□ -0.25
GABPB1-208ENST00000558970 SLC11A1P49279 550 aa13.46□□□□□ -0.25
GABPB1-208ENST00000558970 CLCNKBP51801 687 aa13.46□□□□□ -0.25
GABPB1-208ENST00000558970 BCAR1P56945 870 aa13.46□□□□□ -0.25
GABPB1-208ENST00000558970 TAP1Q03518 808 aa13.46□□□□□ -0.25
GABPB1-208ENST00000558970 TUSC3Q13454 348 aa13.46□□□□□ -0.25
GABPB1-208ENST00000558970 PSMD6Q15008 389 aa13.46□□□□□ -0.25
GABPB1-208ENST00000558970 SCARA3Q6AZY7 606 aa13.46□□□□□ -0.25
GABPB1-208ENST00000558970 OR5B17Q8NGF7 314 aa13.46□□□□□ -0.25
GABPB1-208ENST00000558970 SP7Q8TDD2 431 aaPredicted RBP13.46□□□□□ -0.25
GABPB1-208ENST00000558970 TIFAQ96CG3 184 aa13.46□□□□□ -0.25
GABPB1-208ENST00000558970 CNOT6LQ96LI5 555 aaKnown RBP13.46□□□□□ -0.25
GABPB1-208ENST00000558970 MFSD14AQ96MC6 490 aa13.46□□□□□ -0.25
GABPB1-208ENST00000558970 CGRRF1Q99675 332 aa13.46□□□□□ -0.25
GABPB1-208ENST00000558970 NAT10Q9H0A0 1025 aaKnown RBP13.46□□□□□ -0.25
GABPB1-208ENST00000558970 SLC28A3Q9HAS3 691 aa13.46□□□□□ -0.25
GABPB1-208ENST00000558970 PLEKHA5Q9HAU0 1116 aa13.46□□□□□ -0.25
GABPB1-208ENST00000558970 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.46□□□□□ -0.254e-7■■■■■ 57.7
GABPB1-208ENST00000558970 SAMSN1Q9NSI8 373 aaKnown RBP13.46□□□□□ -0.25
GABPB1-208ENST00000558970 UBQLN1Q9UMX0 589 aaKnown RBP13.46□□□□□ -0.25
GABPB1-208ENST00000558970 NFE2L3Q9Y4A8 694 aa13.46□□□□□ -0.25
GABPB1-208ENST00000558970 CHD9Q3L8U1 2897 aa13.46□□□□□ -0.25
GABPB1-208ENST00000558970 UNC80Q8N2C7 3258 aa13.45□□□□□ -0.26
GABPB1-208ENST00000558970 TTC28Q96AY4 2481 aa13.45□□□□□ -0.26
GABPB1-208ENST00000558970 NRP1O14786 923 aa13.45□□□□□ -0.26
GABPB1-208ENST00000558970 PPEF2O14830 753 aa13.45□□□□□ -0.26
GABPB1-208ENST00000558970 SLC16A3O15427 465 aaKnown RBP13.45□□□□□ -0.26
GABPB1-208ENST00000558970 ITGB3P05106 788 aa13.45□□□□□ -0.26
GABPB1-208ENST00000558970 KCNE1P15382 129 aa13.45□□□□□ -0.26
GABPB1-208ENST00000558970 IGFBP6P24592 240 aaPredicted RBP13.45□□□□□ -0.26
GABPB1-208ENST00000558970 ZNF165P49910 485 aa13.45□□□□□ -0.26
GABPB1-208ENST00000558970 VAMP7P51809 220 aa13.45□□□□□ -0.26
GABPB1-208ENST00000558970 SMAD3P84022 425 aaKnown RBP13.45□□□□□ -0.26
GABPB1-208ENST00000558970 MYL5Q02045 173 aa13.45□□□□□ -0.26
GABPB1-208ENST00000558970 BFSP1Q12934 665 aa13.45□□□□□ -0.26
GABPB1-208ENST00000558970 BIRC3Q13489 604 aa13.45□□□□□ -0.26
GABPB1-208ENST00000558970 MYBPC2Q14324 1141 aa13.45□□□□□ -0.26
GABPB1-208ENST00000558970 NAB2Q15742 525 aa13.45□□□□□ -0.26
GABPB1-208ENST00000558970 XKR4Q5GH76 650 aa13.45□□□□□ -0.26
GABPB1-208ENST00000558970 SPATA1Q5VX52 437 aa13.45□□□□□ -0.26
GABPB1-208ENST00000558970 KCNT2Q6UVM3 1135 aa13.45□□□□□ -0.26
GABPB1-208ENST00000558970 LRSAM1Q6UWE0 723 aa13.45□□□□□ -0.26
GABPB1-208ENST00000558970 TMEM173Q86WV6 379 aaPredicted RBP13.45□□□□□ -0.26
GABPB1-208ENST00000558970 CD302Q8IX05 232 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 287.9 ms