RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 PLIN2Q99541 437 aa6.65□□□□□ -1.34
CTDSPL2-204ENST00000558966 RUSC1Q9BVN2 902 aa6.65□□□□□ -1.34
CTDSPL2-204ENST00000558966 COL25A1Q9BXS0 654 aaPredicted RBP6.65□□□□□ -1.34
CTDSPL2-204ENST00000558966 RBCK1Q9BYM8 510 aa6.65□□□□□ -1.34
CTDSPL2-204ENST00000558966 CCDC113Q9H0I3 377 aa6.65□□□□□ -1.34
CTDSPL2-204ENST00000558966 NSUN3Q9H649 340 aaKnown RBP6.65□□□□□ -1.34
CTDSPL2-204ENST00000558966 DNM3Q9UQ16 869 aa6.65□□□□□ -1.34
CTDSPL2-204ENST00000558966 PCDHGC5Q9Y5F6 944 aa6.65□□□□□ -1.34
CTDSPL2-204ENST00000558966 CLIC4Q9Y696 253 aa6.65□□□□□ -1.34
CTDSPL2-204ENST00000558966 MYH11P35749 1972 aa6.65□□□□□ -1.35
CTDSPL2-204ENST00000558966 STX6O43752 255 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 OFD1O75665 1012 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 FGF18O76093 207 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 BMP15O95972 392 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 BMP2P12643 396 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 NCLP19338 710 aaKnown RBP6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 NAMPTP43490 491 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 KCNQ1P51787 676 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 MRPS5P82675 430 aaKnown RBP6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 HYAL1Q12794 435 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 COL19A1Q14993 1142 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 ZRSR1Q15695 479 aaKnown RBP6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 FAM187BQ17R55 369 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 RINT1Q6NUQ1 792 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 KCNT2Q6UVM3 1135 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 C1orf186Q6ZWK4 172 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 CABP7Q86V35 215 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 CDR2LQ86X02 465 aaPredicted RBP6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 HSCBQ8IWL3 235 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 THNSL1Q8IYQ7 743 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 POF1BQ8WVV4 589 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 KIFAP3Q92845 792 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 CCDC51Q96ER9 411 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 AK8Q96MA6 479 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 KIFC3Q9BVG8 833 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 MRPL9Q9BYD2 267 aaKnown RBP6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 CSRNP2Q9H175 543 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 FZD8Q9H461 694 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 RSAD1Q9HA92 442 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 AAASQ9NRG9 546 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 TBC1D13Q9NVG8 400 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 COG5Q9UP83 839 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 INPP5FQ9Y2H2 1132 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 HES2Q9Y543 173 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 IPPQ9Y573 584 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 PCDHB12Q9Y5F1 795 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 CNTNAP2Q9UHC6 1331 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 A0A1B0GUA9 196 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 HIP1RO75146 1068 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 ZC3H11AO75152 810 aaKnown RBP eCLIP6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 GTF2F1P35269 517 aaKnown RBP eCLIP6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 SLC12A3P55017 1021 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 UBE3AQ05086 875 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 DNM1Q05193 864 aaKnown RBP6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 POU4F2Q12837 409 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 PPP2R5AQ15172 486 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 NOMO2Q5JPE7 1267 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 SLC27A1Q6PCB7 646 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 GLB1LQ6UWU2 654 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 PRICKLE2Q7Z3G6 844 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 ADGRD2Q7Z7M1 963 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 TMEM173Q86WV6 379 aaPredicted RBP6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 ZBTB8OSQ8IWT0 167 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 SLC39A11Q8N1S5 342 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 RSPH1Q8WYR4 309 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 PGBD4Q96DM1 585 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 ZNF558Q96NG5 402 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 NT5C3AQ9H0P0 336 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 C2orf40Q9H1Z8 148 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 NXF3Q9H4D5 531 aaKnown RBP6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 NRDE2Q9H7Z3 1164 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 UBE2ZQ9H832 354 aaPredicted RBP6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 PRMT7Q9NVM4 692 aaPredicted RBP6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 POLIQ9UNA4 740 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 USP20Q9Y2K6 914 aa6.64□□□□□ -1.35
CTDSPL2-204ENST00000558966 TDRD15B5MCY1 1934 aaKnown RBP6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 NT5C1B-RDH14C9J2C7 533 aa6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 DLL1O00548 723 aa6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 FSCN2O14926 492 aa6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 INPPL1O15357 1258 aa6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 NPTXRO95502 500 aa6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 SSBP05455 408 aaKnown RBP eCLIP6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 PRKCBP05771 671 aa6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 PLA2G4BP0C869 781 aa6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 BMP1P13497 986 aa6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 ITGA4P13612 1032 aa6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 PLCG1P19174 1290 aa6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 GUCY2CP25092 1073 aa6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 MARCKSP29966 332 aaPredicted RBP6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 PPM1AP35813 382 aa6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 LONP1P36776 959 aaKnown RBP6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 MLH1P40692 756 aa6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 NPTX2P47972 431 aa6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 BCAR1P56945 870 aa6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 ERVFC1P60507 584 aa6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 PLCB3Q01970 1234 aa6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 CEBPZQ03701 1054 aaKnown RBP6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 NCBP1Q09161 790 aaKnown RBP6.63□□□□□ -1.35
CTDSPL2-204ENST00000558966 RAD51AP2Q09MP3 1159 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms