RNA–Protein interactions for RNA: ENST00000558861.1

LRRC28-209, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-209ENST00000558861 LSP1P33241 339 aa7.23□□□□□ -1.25
LRRC28-209ENST00000558861 LRRC32Q14392 662 aa7.23□□□□□ -1.25
LRRC28-209ENST00000558861 EPHA7Q15375 998 aa7.23□□□□□ -1.25
LRRC28-209ENST00000558861 TARBP2Q15633 366 aaKnown RBP7.23□□□□□ -1.25
LRRC28-209ENST00000558861 HSP90AB4PQ58FF6 505 aa7.23□□□□□ -1.25
LRRC28-209ENST00000558861 GPR158Q5T848 1215 aa7.23□□□□□ -1.25
LRRC28-209ENST00000558861 STRIP1Q5VSL9 837 aa7.23□□□□□ -1.25
LRRC28-209ENST00000558861 OTUD7AQ8TE49 926 aaPredicted RBP7.23□□□□□ -1.25
LRRC28-209ENST00000558861 FOXRED1Q96CU9 486 aaPredicted RBP7.23□□□□□ -1.25
LRRC28-209ENST00000558861 IL1RAPL2Q9NP60 686 aa7.23□□□□□ -1.25
LRRC28-209ENST00000558861 UCKL1Q9NWZ5 548 aa7.23□□□□□ -1.25
LRRC28-209ENST00000558861 HSPBP1Q9NZL4 362 aa7.23□□□□□ -1.25
LRRC28-209ENST00000558861 KLHL42Q9P2K6 505 aa7.23□□□□□ -1.25
LRRC28-209ENST00000558861 WDR90Q96KV7 1748 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 SHTN1A0MZ66 631 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 ZNF839A8K0R7 811 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 KDM1AO60341 852 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 SEMA7AO75326 666 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 MPIG6BO95866 241 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 IGFBP6P24592 240 aaPredicted RBP7.22□□□□□ -1.25
LRRC28-209ENST00000558861 CD40P25942 277 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 KCNJ4P48050 445 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 ERVK-21P61565 698 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 FKBP1AP62942 108 aaKnown RBP7.22□□□□□ -1.25
LRRC28-209ENST00000558861 PFKPQ01813 784 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 PHF19Q5T6S3 580 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 PRAMEF18Q5VWM3 479 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 VASNQ6EMK4 673 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 ZNF804AQ7Z570 1209 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 B3GNT8Q7Z7M8 397 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 STK32CQ86UX6 486 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 RASSF3Q86WH2 238 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 CMIPQ8IY22 773 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 ZZZ3Q8IYH5 903 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 GPC2Q8N158 579 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 FBXO15Q8NCQ5 510 aaPredicted RBP7.22□□□□□ -1.25
LRRC28-209ENST00000558861 ZNF384Q8TF68 577 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 JDP2Q8WYK2 163 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 GCC1Q96CN9 775 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 AHCYL2Q96HN2 611 aaKnown RBP7.22□□□□□ -1.25
LRRC28-209ENST00000558861 ZBED3Q96IU2 234 aaPredicted RBP7.22□□□□□ -1.25
LRRC28-209ENST00000558861 CEP89Q96ST8 783 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 MXD3Q9BW11 206 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 LRRCC1Q9C099 1032 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 ZDHHC5Q9C0B5 715 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 SEMA4AQ9H3S1 761 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 NGRNQ9NPE2 291 aaKnown RBP7.22□□□□□ -1.25
LRRC28-209ENST00000558861 C14orf119Q9NWQ9 140 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 MSRAQ9UJ68 235 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 SALL1Q9NSC2 1324 aa7.22□□□□□ -1.25
LRRC28-209ENST00000558861 AKAP11Q9UKA4 1901 aa7.21□□□□□ -1.25
LRRC28-209ENST00000558861 GOLGA6L22H0YM25 854 aa7.21□□□□□ -1.26
LRRC28-209ENST00000558861 S100BP04271 92 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-209ENST00000558861 PFKLP17858 780 aa7.21□□□□□ -1.26
LRRC28-209ENST00000558861 PTGS1P23219 599 aa7.21□□□□□ -1.26
LRRC28-209ENST00000558861 MCAMP43121 646 aa7.21□□□□□ -1.26
LRRC28-209ENST00000558861 LIMS1P48059 325 aa7.21□□□□□ -1.26
LRRC28-209ENST00000558861 GMPSP49915 693 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-209ENST00000558861 ZNF280AP59817 542 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-209ENST00000558861 NUCB1Q02818 461 aa7.21□□□□□ -1.26
LRRC28-209ENST00000558861 OS9Q13438 667 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-209ENST00000558861 SYDE2Q5VT97 1194 aa7.21□□□□□ -1.26
LRRC28-209ENST00000558861 ERICH6BQ5W0A0 696 aa7.21□□□□□ -1.26
LRRC28-209ENST00000558861 MCTP1Q6DN14 999 aa7.21□□□□□ -1.26
LRRC28-209ENST00000558861 CIAPIN1Q6FI81 312 aa7.21□□□□□ -1.26
LRRC28-209ENST00000558861 AACSQ86V21 672 aa7.21□□□□□ -1.26
LRRC28-209ENST00000558861 C16orf71Q8IYS4 520 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-209ENST00000558861 CLASRPQ8N2M8 674 aaKnown RBP7.21□□□□□ -1.26
LRRC28-209ENST00000558861 DPF2Q92785 391 aa7.21□□□□□ -1.26
LRRC28-209ENST00000558861 GORASP1Q9BQQ3 440 aa7.21□□□□□ -1.26
LRRC28-209ENST00000558861 RWDD1Q9H446 243 aaPredicted RBP7.21□□□□□ -1.26
LRRC28-209ENST00000558861 POFUT1Q9H488 388 aa7.21□□□□□ -1.26
LRRC28-209ENST00000558861 HMG20BQ9P0W2 317 aa7.21□□□□□ -1.26
LRRC28-209ENST00000558861 FAN1Q9Y2M0 1017 aa7.21□□□□□ -1.26
LRRC28-209ENST00000558861 NOC2LQ9Y3T9 749 aaKnown RBP7.21□□□□□ -1.26
LRRC28-209ENST00000558861 ASB1Q9Y576 335 aa7.21□□□□□ -1.26
LRRC28-209ENST00000558861 UBA6A0AVT1 1052 aaPredicted RBP7.2□□□□□ -1.26
LRRC28-209ENST00000558861 GABRDO14764 452 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 N4BP3O15049 544 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 PRLP01236 227 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 RPS12P25398 132 aaKnown RBP7.2□□□□□ -1.26
LRRC28-209ENST00000558861 EPS15P42566 896 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 ITGA1P56199 1179 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 DLG4P78352 724 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 TNIP1Q15025 636 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 PDCD1Q15116 288 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 SKIDA1Q1XH10 827 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 ABCB5Q2M3G0 1257 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 CAVIN4Q5BKX8 364 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 ODR4Q5SWX8 454 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 TTLL5Q6EMB2 1281 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 LRSAM1Q6UWE0 723 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 CBARPQ8N350 705 aaPredicted RBP7.2□□□□□ -1.26
LRRC28-209ENST00000558861 C7orf31Q8N865 590 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 DTX3Q8N9I9 347 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 AGBL3Q8NEM8 1001 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 ZSWIM3Q96MP5 696 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 NOX5Q96PH1 765 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 AMNQ9BXJ7 453 aa7.2□□□□□ -1.26
LRRC28-209ENST00000558861 NMRK2Q9NPI5 230 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms