RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 XKR4Q5GH76 650 aa12.65□□□□□ -0.38
CASC4-205ENST00000558735 GLRA4Q5JXX5 417 aa12.65□□□□□ -0.38
CASC4-205ENST00000558735 HYIQ5T013 277 aa12.65□□□□□ -0.38
CASC4-205ENST00000558735 ZC3H14Q6PJT7 736 aaKnown RBP12.65□□□□□ -0.38
CASC4-205ENST00000558735 SLC44A3Q8N4M1 653 aa12.65□□□□□ -0.38
CASC4-205ENST00000558735 KCNG4Q8TDN1 519 aa12.65□□□□□ -0.38
CASC4-205ENST00000558735 RUBCNQ92622 972 aa12.65□□□□□ -0.38
CASC4-205ENST00000558735 ZBTB45Q96K62 511 aaPredicted RBP12.65□□□□□ -0.38
CASC4-205ENST00000558735 PLIN2Q99541 437 aa12.65□□□□□ -0.38
CASC4-205ENST00000558735 TARS2Q9BW92 718 aaKnown RBP12.65□□□□□ -0.38
CASC4-205ENST00000558735 CDT1Q9H211 546 aa12.65□□□□□ -0.38
CASC4-205ENST00000558735 KMT5AQ9NQR1 393 aa12.65□□□□□ -0.38
CASC4-205ENST00000558735 ZDHHC7Q9NXF8 308 aa12.65□□□□□ -0.38
CASC4-205ENST00000558735 ARHGAP28Q9P2N2 729 aa12.65□□□□□ -0.38
CASC4-205ENST00000558735 KIF3AQ9Y496 699 aa12.65□□□□□ -0.38
CASC4-205ENST00000558735 CACNA1BQ00975 2339 aa12.65□□□□□ -0.39
CASC4-205ENST00000558735 CLUHO75153 1309 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 ABLIM1O14639 778 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 SLC16A4O15374 487 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 NARSO43776 548 aaKnown RBP12.64□□□□□ -0.39
CASC4-205ENST00000558735 B3GAT3O94766 335 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 FGFR3P22607 806 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 PROZP22891 400 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 GUCY2CP25092 1073 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 GBP2P32456 591 aaPredicted RBP12.64□□□□□ -0.39
CASC4-205ENST00000558735 GRM5P41594 1212 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 CLCNKBP51801 687 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 OSTNP61366 133 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 CREMQ03060 361 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 SOX4Q06945 474 aaPredicted RBP12.64□□□□□ -0.39
CASC4-205ENST00000558735 ELAVL2Q12926 359 aaKnown RBP12.64□□□□□ -0.39
CASC4-205ENST00000558735 ZRSR1Q15695 479 aaKnown RBP12.64□□□□□ -0.39
CASC4-205ENST00000558735 PSMD5Q16401 504 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 UPP1Q16831 310 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 RSPO2Q6UXX9 243 aaPredicted RBP12.64□□□□□ -0.39
CASC4-205ENST00000558735 KIAA2013Q8IYS2 634 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 SYT2Q8N9I0 419 aaPredicted RBP12.64□□□□□ -0.39
CASC4-205ENST00000558735 STAMQ92783 540 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 ZMAT2Q96NC0 199 aaKnown RBP12.64□□□□□ -0.39
CASC4-205ENST00000558735 C17orf75Q9HAS0 396 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 PIDD1Q9HB75 910 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 GOLGA2P5Q9HBQ8 144 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 R4GN57 208 aa12.64□□□□□ -0.39
CASC4-205ENST00000558735 C2orf16Q68DN1 1984 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 VWA3AA6NCI4 1184 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 H3BQV1 296 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 TMEM189-UBE2V1I3L0A0 370 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 MEFVO15553 781 aaPredicted RBP12.63□□□□□ -0.39
CASC4-205ENST00000558735 SP9P0CG40 484 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 LAMP2P13473 410 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 OR1D2P34982 312 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 SLC12A3P55017 1021 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 RAD51AP2Q09MP3 1159 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 DMP1Q13316 513 aaPredicted RBP12.63□□□□□ -0.39
CASC4-205ENST00000558735 RAB33AQ14088 237 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 ARSHQ5FYA8 562 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 ARL6IP4Q66PJ3 421 aaKnown RBP12.63□□□□□ -0.39
CASC4-205ENST00000558735 APBB1IPQ7Z5R6 666 aaPredicted RBP12.63□□□□□ -0.39
CASC4-205ENST00000558735 KCTD17Q8N5Z5 321 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 C3orf58Q8NDZ4 430 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 SPIRE2Q8WWL2 714 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 DRC1Q96MC2 740 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 ACAP3Q96P50 834 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 TCHPQ9BT92 498 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 CCDC94Q9BW85 323 aaPredicted RBP12.63□□□□□ -0.39
CASC4-205ENST00000558735 MRPL4Q9BYD3 311 aaKnown RBP12.63□□□□□ -0.39
CASC4-205ENST00000558735 TBC1D17Q9HA65 648 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 SLC2A4RGQ9NR83 387 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.63□□□□□ -0.39
CASC4-205ENST00000558735 FBXW11Q9UKB1 542 aa12.63□□□□□ -0.39
CASC4-205ENST00000558735 PHLPP2Q6ZVD8 1323 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 MTCL1Q9Y4B5 1905 aaKnown RBP12.62□□□□□ -0.39
CASC4-205ENST00000558735 GPR179Q6PRD1 2367 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 NPHP3-ACAD11A0A0J9YXS1 232 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 ANHXE9PGG2 379 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 I3L4J1 428 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 CFHP08603 1231 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 PLA2G4BP0C869 781 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 MCF2P10911 925 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 PLS3P13797 630 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 KCNE1P15382 129 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 TKTP29401 623 aaKnown RBP12.62□□□□□ -0.39
CASC4-205ENST00000558735 BRCC3P46736 316 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 YARSP54577 528 aaKnown RBP12.62□□□□□ -0.39
CASC4-205ENST00000558735 ZNF568Q3ZCX4 644 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 LARP1BQ659C4 914 aaKnown RBP12.62□□□□□ -0.39
CASC4-205ENST00000558735 PDXDC1Q6P996 788 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.62□□□□□ -0.39
CASC4-205ENST00000558735 GRASPQ7Z6J2 395 aaPredicted RBP12.62□□□□□ -0.39
CASC4-205ENST00000558735 C1orf210Q8IVY1 113 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 SUMF1Q8NBK3 374 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 TMEM161BQ8NDZ6 487 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 UROC1Q96N76 676 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 TIPINQ9BVW5 301 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 SMC3Q9UQE7 1217 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 SIT1Q9Y3P8 196 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 DOCK6Q96HP0 2047 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 ACACBO00763 2458 aa12.62□□□□□ -0.39
CASC4-205ENST00000558735 TPRP12270 2363 aaKnown RBP12.62□□□□□ -0.39
CASC4-205ENST00000558735 FANCMQ8IYD8 2048 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms