RNA–Protein interactions for RNA: ENST00000558639.5

PSMA4-208, Transcript of proteasome subunit alpha 4, humanhuman

TSL 3

Gene PSMA4, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-208ENST00000558639 HOMER1Q86YM7 354 aa8.63□□□□□ -1.03
PSMA4-208ENST00000558639 ENAHQ8N8S7 591 aaPredicted RBP8.63□□□□□ -1.03
PSMA4-208ENST00000558639 LRRN4CLQ8ND94 238 aa8.63□□□□□ -1.03
PSMA4-208ENST00000558639 ARNTL2Q8WYA1 636 aa8.63□□□□□ -1.03
PSMA4-208ENST00000558639 ANKS1AQ92625 1134 aa8.63□□□□□ -1.03
PSMA4-208ENST00000558639 IWS1Q96ST2 819 aa8.63□□□□□ -1.03
PSMA4-208ENST00000558639 DSCC1Q9BVC3 393 aa8.63□□□□□ -1.03
PSMA4-208ENST00000558639 AMNQ9BXJ7 453 aa8.63□□□□□ -1.03
PSMA4-208ENST00000558639 OSBPL1AQ9BXW6 950 aa8.63□□□□□ -1.03
PSMA4-208ENST00000558639 GP6Q9HCN6 339 aa8.63□□□□□ -1.03
PSMA4-208ENST00000558639 COL20A1Q9P218 1284 aa8.63□□□□□ -1.03
PSMA4-208ENST00000558639 SUSD2Q9UGT4 822 aa8.63□□□□□ -1.03
PSMA4-208ENST00000558639 MYO9BQ13459 2157 aa8.63□□□□□ -1.03
PSMA4-208ENST00000558639 ERICH2A1L162 156 aa8.62□□□□□ -1.03
PSMA4-208ENST00000558639 FAM170BA6NMN3 283 aa8.62□□□□□ -1.03
PSMA4-208ENST00000558639 EIF3JO75822 258 aaKnown RBP8.62□□□□□ -1.03
PSMA4-208ENST00000558639 H2AFB1P0C5Y9 115 aa8.62□□□□□ -1.03
PSMA4-208ENST00000558639 H2AFB2P0C5Z0 115 aa8.62□□□□□ -1.03
PSMA4-208ENST00000558639 GSPT1P15170 499 aaKnown RBP8.62□□□□□ -1.03
PSMA4-208ENST00000558639 HOXA13P31271 388 aaPredicted RBP8.62□□□□□ -1.03
PSMA4-208ENST00000558639 CCDC62Q6P9F0 684 aa8.62□□□□□ -1.03
PSMA4-208ENST00000558639 POMZP3Q6PJE2 187 aa8.62□□□□□ -1.03
PSMA4-208ENST00000558639 C22orf34Q6ZV56 151 aa8.62□□□□□ -1.03
PSMA4-208ENST00000558639 CYB5R4Q7L1T6 521 aa8.62□□□□□ -1.03
PSMA4-208ENST00000558639 TMCO2Q7Z6W1 182 aaPredicted RBP8.62□□□□□ -1.03
PSMA4-208ENST00000558639 PHOSPHO2Q8TCD6 241 aa8.62□□□□□ -1.03
PSMA4-208ENST00000558639 PIBF1Q8WXW3 757 aa8.62□□□□□ -1.03
PSMA4-208ENST00000558639 MLXIPQ9HAP2 919 aa8.62□□□□□ -1.03
PSMA4-208ENST00000558639 PRR13Q9NZ81 148 aa8.62□□□□□ -1.03
PSMA4-208ENST00000558639 HDAC6Q9UBN7 1215 aa8.62□□□□□ -1.03
PSMA4-208ENST00000558639 PCDHA1Q9Y5I3 950 aa8.62□□□□□ -1.03
PSMA4-208ENST00000558639 ENPP3O14638 875 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 IFIT3O14879 490 aaKnown RBP8.61□□□□□ -1.03
PSMA4-208ENST00000558639 F13BP05160 661 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 CHMLP26374 656 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 GSK3AP49840 483 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 NT5C2P49902 561 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 ARHGAP1Q07960 439 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 DOC2BQ14184 412 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 LONRF2Q1L5Z9 754 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 KIAA0753Q2KHM9 967 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 ZC3H12BQ5HYM0 836 aaKnown RBP8.61□□□□□ -1.03
PSMA4-208ENST00000558639 KRT40Q6A162 431 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 FAM214BQ7L5A3 538 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 HERC6Q8IVU3 1022 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 MFSD4AQ8N468 514 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 DTWD2Q8NBA8 298 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 BVESQ8NE79 360 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 PIWIL2Q8TC59 973 aaKnown RBP8.61□□□□□ -1.03
PSMA4-208ENST00000558639 KAT2BQ92831 832 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 HEXIM2Q96MH2 286 aaKnown RBP8.61□□□□□ -1.03
PSMA4-208ENST00000558639 SPATA33Q96N06 139 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 IPO9Q96P70 1041 aaKnown RBP8.61□□□□□ -1.03
PSMA4-208ENST00000558639 PIGSQ96S52 555 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 PRDM14Q9GZV8 571 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 PXMP2Q9NR77 195 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 APEX2Q9UBZ4 518 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 MTUS1Q9ULD2 1270 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 AKT3Q9Y243 479 aa8.61□□□□□ -1.03
PSMA4-208ENST00000558639 LAMA3Q16787 3333 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 SCN5AQ14524 2016 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 WDR64B1ANS9 1081 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 GCOM1H8Y6P7 765 aaPredicted RBP8.6□□□□□ -1.03
PSMA4-208ENST00000558639 RBAK-RBAKDNI3L0D1 243 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 ZBTB5O15062 677 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 SHOXO15266 292 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 PPFIA4O75335 1185 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 IGLV1-40P01703 118 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 POLR2MP0CAP2 368 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 ZNF286BP0CG31 522 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 CKBP12277 381 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 ZNF445P59923 1031 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 ZNF200P98182 395 aaPredicted RBP8.6□□□□□ -1.03
PSMA4-208ENST00000558639 TFF2Q03403 129 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 TAP1Q03518 808 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 HSP90AA2PQ14568 343 aaPredicted RBP8.6□□□□□ -1.03
PSMA4-208ENST00000558639 CLEC16AQ2KHT3 1053 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 AAK1Q2M2I8 961 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 LRRC8DQ7L1W4 858 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 ZSWIM2Q8NEG5 633 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 ADCY4Q8NFM4 1077 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 CAGE1Q8TC20 777 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 AFAP1L1Q8TED9 768 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 RCC1LQ96I51 464 aaKnown RBP8.6□□□□□ -1.03
PSMA4-208ENST00000558639 UHRF1Q96T88 793 aaPredicted RBP8.6□□□□□ -1.03
PSMA4-208ENST00000558639 KATNAL1Q9BW62 490 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 FANCLQ9NW38 375 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 RTEL1Q9NZ71 1219 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 MAD2L2Q9UI95 211 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 SF3B6Q9Y3B4 125 aaKnown RBP8.6□□□□□ -1.03
PSMA4-208ENST00000558639 FHOD1Q9Y613 1164 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 MTCH2Q9Y6C9 303 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 TRIP12Q14669 1992 aaPredicted RBP8.6□□□□□ -1.03
PSMA4-208ENST00000558639 LCTP09848 1927 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 GBF1Q92538 1859 aa8.6□□□□□ -1.03
PSMA4-208ENST00000558639 DNAH12Q6ZR08 3092 aa8.59□□□□□ -1.03
PSMA4-208ENST00000558639 A0A1W2PQU0 124 aa8.59□□□□□ -1.03
PSMA4-208ENST00000558639 BAIAP3O94812 1187 aa8.59□□□□□ -1.03
PSMA4-208ENST00000558639 GGPS1O95749 300 aa8.59□□□□□ -1.03
PSMA4-208ENST00000558639 ITGAVP06756 1048 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms