RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 HSP90AA2PQ14568 343 aaPredicted RBP13.59□□□□□ -0.23
LRRC28-206ENST00000558471 ZBTB6Q15916 424 aa13.59□□□□□ -0.23
LRRC28-206ENST00000558471 CD302Q8IX05 232 aa13.59□□□□□ -0.23
LRRC28-206ENST00000558471 VPS52Q8N1B4 723 aa13.59□□□□□ -0.23
LRRC28-206ENST00000558471 GPD1LQ8N335 351 aa13.59□□□□□ -0.23
LRRC28-206ENST00000558471 TMEM130Q8N3G9 435 aa13.59□□□□□ -0.23
LRRC28-206ENST00000558471 MICAL1Q8TDZ2 1067 aa13.59□□□□□ -0.23
LRRC28-206ENST00000558471 SMARCE1Q969G3 411 aa13.59□□□□□ -0.23
LRRC28-206ENST00000558471 C18orf25Q96B23 403 aaPredicted RBP13.59□□□□□ -0.23
LRRC28-206ENST00000558471 GSDMAQ96QA5 445 aa13.59□□□□□ -0.23
LRRC28-206ENST00000558471 SLC38A7Q9NVC3 462 aa13.59□□□□□ -0.23
LRRC28-206ENST00000558471 HSPBP1Q9NZL4 362 aa13.59□□□□□ -0.23
LRRC28-206ENST00000558471 MAPK8IP1Q9UQF2 711 aa13.59□□□□□ -0.23
LRRC28-206ENST00000558471 FSCN2O14926 492 aa13.58□□□□□ -0.24
LRRC28-206ENST00000558471 KIAA0391O15091 583 aaKnown RBP13.58□□□□□ -0.24
LRRC28-206ENST00000558471 EXTL3O43909 919 aa13.58□□□□□ -0.24
LRRC28-206ENST00000558471 EFEMP2O95967 443 aa13.58□□□□□ -0.24
LRRC28-206ENST00000558471 UPP1Q16831 310 aa13.58□□□□□ -0.24
LRRC28-206ENST00000558471 DCLRE1AQ6PJP8 1040 aa13.58□□□□□ -0.24
LRRC28-206ENST00000558471 CD300LGQ6UXG3 332 aa13.58□□□□□ -0.24
LRRC28-206ENST00000558471 HS2ST1Q7LGA3 356 aa13.58□□□□□ -0.24
LRRC28-206ENST00000558471 TAS1R1Q7RTX1 841 aa13.58□□□□□ -0.24
LRRC28-206ENST00000558471 TMC7Q7Z402 723 aa13.58□□□□□ -0.24
LRRC28-206ENST00000558471 C12orf56Q8IXR9 622 aa13.58□□□□□ -0.24
LRRC28-206ENST00000558471 SMYD4Q8IYR2 804 aaPredicted RBP13.58□□□□□ -0.24
LRRC28-206ENST00000558471 HASPINQ8TF76 798 aa13.58□□□□□ -0.24
LRRC28-206ENST00000558471 NOC3LQ8WTT2 800 aaKnown RBP13.58□□□□□ -0.24
LRRC28-206ENST00000558471 KIF12Q96FN5 646 aa13.58□□□□□ -0.24
LRRC28-206ENST00000558471 TCF25Q9BQ70 676 aa13.58□□□□□ -0.24
LRRC28-206ENST00000558471 KCTD10Q9H3F6 313 aa13.58□□□□□ -0.24
LRRC28-206ENST00000558471 NSUN3Q9H649 340 aaKnown RBP13.58□□□□□ -0.24
LRRC28-206ENST00000558471 ASB7Q9H672 318 aa13.58□□□□□ -0.24
LRRC28-206ENST00000558471 RMND1Q9NWS8 449 aa13.58□□□□□ -0.24
LRRC28-206ENST00000558471 TUBGCP4Q9UGJ1 667 aa13.58□□□□□ -0.24
LRRC28-206ENST00000558471 REV3LO60673 3130 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 TADA2AO75478 443 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 KIF4AO95239 1232 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 SLC34A2O95436 690 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 NFICP08651 508 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 CYP2J2P51589 502 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 WNT7BP56706 349 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 CAMK4Q16566 473 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 TIGD5Q53EQ6 642 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 TCEAL5Q5H9L2 206 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 ZNF658Q5TYW1 1059 aaPredicted RBP13.57□□□□□ -0.24
LRRC28-206ENST00000558471 ISM2Q6H9L7 571 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 JADE1Q6IE81 842 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 PDE12Q6L8Q7 609 aaKnown RBP13.57□□□□□ -0.24
LRRC28-206ENST00000558471 ADGRD2Q7Z7M1 963 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 CBWD2Q8IUF1 395 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 BRSK2Q8IWQ3 736 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 RNF168Q8IYW5 571 aaPredicted RBP13.57□□□□□ -0.24
LRRC28-206ENST00000558471 GUF1Q8N442 669 aaKnown RBP13.57□□□□□ -0.24
LRRC28-206ENST00000558471 DDX27Q96GQ7 796 aaKnown RBP13.57□□□□□ -0.24
LRRC28-206ENST00000558471 FBXL18Q96ME1 805 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 UROC1Q96N76 676 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 TSPAN18Q96SJ8 248 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 GPR62Q9BZJ7 368 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 ZBP1Q9H171 429 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 NGRNQ9NPE2 291 aaKnown RBP13.57□□□□□ -0.24
LRRC28-206ENST00000558471 ENTPD7Q9NQZ7 604 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 CGNQ9P2M7 1197 aaKnown RBP13.57□□□□□ -0.24
LRRC28-206ENST00000558471 MAN1B1Q9UKM7 699 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 ADAM28Q9UKQ2 775 aa13.57□□□□□ -0.24
LRRC28-206ENST00000558471 UBQLN1Q9UMX0 589 aaKnown RBP13.57□□□□□ -0.24
LRRC28-206ENST00000558471 COL6A3P12111 3177 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 ZNF233A6NK53 670 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 HIDE1A8MVS5 230 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 TULP1O00294 542 aaPredicted RBP13.56□□□□□ -0.24
LRRC28-206ENST00000558471 PODXLO00592 558 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 PDXKO00764 312 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 B3GAT3O94766 335 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 KIF20AO95235 890 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 IL18RAPO95256 599 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 CXCL14O95715 111 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 SOD2P04179 222 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 CTSAP10619 480 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 CYP3A5P20815 502 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 RPL9P32969 192 aaKnown RBP13.56□□□□□ -0.24
LRRC28-206ENST00000558471 PRCPP42785 496 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 GUCY2FP51841 1108 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 SPATA1Q5VX52 437 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 PLPP4Q5VZY2 271 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 FUT10Q6P4F1 479 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 MRPL43Q8N983 215 aaKnown RBP13.56□□□□□ -0.24
LRRC28-206ENST00000558471 XXYLT1Q8NBI6 393 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 RDH13Q8NBN7 331 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 C3orf58Q8NDZ4 430 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 GOLGA5Q8TBA6 731 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 AUTS2Q8WXX7 1259 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 KIAA1586Q9HCI6 787 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 DMAC2Q9NW81 257 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 RBAKQ9NYW8 714 aaPredicted RBP13.56□□□□□ -0.24
LRRC28-206ENST00000558471 DERAQ9Y315 318 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 VWA8A3KMH1 1905 aa13.56□□□□□ -0.24
LRRC28-206ENST00000558471 TMEM189-UBE2V1I3L0A0 370 aa13.55□□□□□ -0.24
LRRC28-206ENST00000558471 PER2O15055 1255 aa13.55□□□□□ -0.24
LRRC28-206ENST00000558471 XPOTO43592 962 aaKnown RBP13.55□□□□□ -0.24
LRRC28-206ENST00000558471 LRPAP1P30533 357 aa13.55□□□□□ -0.24
LRRC28-206ENST00000558471 GTF2F1P35269 517 aaKnown RBP eCLIP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms