RNA–Protein interactions for RNA: ENST00000558347.5

TPM1-212, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-212ENST00000558347 FAM50BQ9Y247 325 aa11.24□□□□□ -0.61
TPM1-212ENST00000558347 TRIOO75962 3097 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 TDRD15B5MCY1 1934 aaKnown RBP11.23□□□□□ -0.61
TPM1-212ENST00000558347 A0A1B0GUA9 196 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 ARL5CA6NH57 179 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 C19orf67A6NJJ6 358 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 INPPL1O15357 1258 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 STX10O60499 249 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 NPTXRO95502 500 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 AKAP5P24588 427 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 SSTR3P32745 418 aaPredicted RBP11.23□□□□□ -0.61
TPM1-212ENST00000558347 MLH1P40692 756 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 SCNN1GP51170 649 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 CUL4BQ13620 913 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 MCM6Q14566 821 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 SMC1AQ14683 1233 aaKnown RBP11.23□□□□□ -0.61
TPM1-212ENST00000558347 FAM187BQ17R55 369 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 SPECC1LQ69YQ0 1117 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 LLGL2Q6P1M3 1020 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 ZBTB8OSQ8IWT0 167 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 ADHFE1Q8IWW8 467 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 VPS52Q8N1B4 723 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 MRPL43Q8N983 215 aaKnown RBP11.23□□□□□ -0.61
TPM1-212ENST00000558347 AUTS2Q8WXX7 1259 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 GAD1Q99259 594 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 KIFC3Q9BVG8 833 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 TRIM9Q9C026 710 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 TRIM6Q9C030 488 aaPredicted RBP11.23□□□□□ -0.61
TPM1-212ENST00000558347 CCDC113Q9H0I3 377 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 UBN1Q9NPG3 1134 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 PRKAG3Q9UGI9 489 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 USP20Q9Y2K6 914 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 NFE2L3Q9Y4A8 694 aa11.23□□□□□ -0.61
TPM1-212ENST00000558347 A0A1B0GTH6 734 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 NRP1O14786 923 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 PRKCBP05771 671 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 TPM1P09493 284 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 PLA2G4BP0C869 781 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 CA8P35219 290 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 NAMPTP43490 491 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 DMTNQ08495 405 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 KCNB1Q14721 858 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 SPATA1Q5VX52 437 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 SYT10Q6XYQ8 523 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 TMEM184AQ6ZMB5 413 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 DDX53Q86TM3 631 aaKnown RBP11.22□□□□□ -0.61
TPM1-212ENST00000558347 TMEM139Q8IV31 216 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 REXO1L1PQ8IX06 675 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 COLGALT2Q8IYK4 626 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 SYT2Q8N9I0 419 aaPredicted RBP11.22□□□□□ -0.61
TPM1-212ENST00000558347 GSTCDQ8NEC7 633 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 STAMQ92783 540 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 FAM193BQ96PV7 902 aaPredicted RBP11.22□□□□□ -0.61
TPM1-212ENST00000558347 TMEM175Q9BSA9 504 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 C2orf40Q9H1Z8 148 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 PDZD7Q9H5P4 517 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 INTS13Q9NVM9 706 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 RMND1Q9NWS8 449 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 KANSL3Q9P2N6 904 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 GIT1Q9Y2X7 761 aa11.22□□□□□ -0.61
TPM1-212ENST00000558347 USP15Q9Y4E8 981 aaPredicted RBP11.22□□□□□ -0.61
TPM1-212ENST00000558347 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.22□□□□□ -0.611e-6■■■□□ 19.1
TPM1-212ENST00000558347 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.21□□□□□ -0.61
TPM1-212ENST00000558347 PVALEFA0A1B0GWK0 134 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 CARNS1A5YM72 827 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 MYMKA6NI61 221 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 KLRC4O43908 158 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 CLASP2O75122 1294 aaKnown RBP11.21□□□□□ -0.61
TPM1-212ENST00000558347 CXCL14O95715 111 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 RPN1P04843 607 aaKnown RBP11.21□□□□□ -0.61
TPM1-212ENST00000558347 CTSAP10619 480 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 CDK11BP21127 795 aaKnown RBP11.21□□□□□ -0.61
TPM1-212ENST00000558347 CASP1P29466 404 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 SLC12A3P55017 1021 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 DSC1Q08554 894 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 MAPK6Q16659 721 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 ANKRD54Q6NXT1 300 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 SYCE2Q6PIF2 218 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 TRIM65Q6PJ69 517 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 DAW1Q8N136 415 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 DEPTORQ8TB45 409 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 PANX2Q96RD6 677 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 RUSC1Q9BVN2 902 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 APOL5Q9BWW9 433 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 NAA15Q9BXJ9 866 aaKnown RBP11.21□□□□□ -0.61
TPM1-212ENST00000558347 S1PR5Q9H228 398 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 BLZF1Q9H2G9 400 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 MARCH5Q9NX47 278 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 KLK14Q9P0G3 267 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 PARP2Q9UGN5 583 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 DNAI1Q9UI46 699 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 FAN1Q9Y2M0 1017 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 PRG3Q9Y2Y8 225 aaPredicted RBP11.21□□□□□ -0.61
TPM1-212ENST00000558347 HCFC2Q9Y5Z7 792 aa11.21□□□□□ -0.61
TPM1-212ENST00000558347 F8W810 466 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 PI4K2BG5E9Z4 385 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 ACKR2O00590 384 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 HIP1RO75146 1068 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 RHOBTB3O94955 611 aa11.2□□□□□ -0.62
TPM1-212ENST00000558347 ALDH2P05091 517 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms