RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 C1orf186Q6ZWK4 172 aa17.03■□□□□ 0.32
TPM1-211ENST00000558314 TAS1R3Q7RTX0 852 aa17.03■□□□□ 0.32
TPM1-211ENST00000558314 GPR65Q8IYL9 337 aa17.03■□□□□ 0.32
TPM1-211ENST00000558314 ZBTB45Q96K62 511 aaPredicted RBP17.03■□□□□ 0.32
TPM1-211ENST00000558314 UROC1Q96N76 676 aa17.03■□□□□ 0.32
TPM1-211ENST00000558314 ACAP3Q96P50 834 aa17.03■□□□□ 0.32
TPM1-211ENST00000558314 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.03■□□□□ 0.32
TPM1-211ENST00000558314 SMC3Q9UQE7 1217 aa17.03■□□□□ 0.32
TPM1-211ENST00000558314 NUB1Q9Y5A7 615 aa17.03■□□□□ 0.32
TPM1-211ENST00000558314 NUMBLQ9Y6R0 609 aa17.03■□□□□ 0.32
TPM1-211ENST00000558314 PODXLO00592 558 aa17.02■□□□□ 0.32
TPM1-211ENST00000558314 XYLBO75191 536 aa17.02■□□□□ 0.32
TPM1-211ENST00000558314 CD2BP2O95400 341 aaKnown RBP17.02■□□□□ 0.32
TPM1-211ENST00000558314 NPR3P17342 541 aa17.02■□□□□ 0.32
TPM1-211ENST00000558314 CLCN5P51795 746 aa17.02■□□□□ 0.32
TPM1-211ENST00000558314 ATP2C1P98194 919 aaPredicted RBP17.02■□□□□ 0.32
TPM1-211ENST00000558314 MAPK7Q13164 816 aa17.02■□□□□ 0.32
TPM1-211ENST00000558314 UPP1Q16831 310 aa17.02■□□□□ 0.32
TPM1-211ENST00000558314 SPECC1Q5M775 1068 aa17.02■□□□□ 0.32
TPM1-211ENST00000558314 MPZL3Q6UWV2 235 aa17.02■□□□□ 0.32
TPM1-211ENST00000558314 C3orf58Q8NDZ4 430 aa17.02■□□□□ 0.32
TPM1-211ENST00000558314 RASSF8Q8NHQ8 419 aa17.02■□□□□ 0.32
TPM1-211ENST00000558314 GPR152Q8TDT2 470 aa17.02■□□□□ 0.32
TPM1-211ENST00000558314 ING5Q8WYH8 240 aa17.02■□□□□ 0.32
TPM1-211ENST00000558314 C18orf25Q96B23 403 aaPredicted RBP17.02■□□□□ 0.32
TPM1-211ENST00000558314 BICD1Q96G01 975 aa17.02■□□□□ 0.32
TPM1-211ENST00000558314 PNMA5Q96PV4 448 aa17.02■□□□□ 0.32
TPM1-211ENST00000558314 TMEM134Q9H6X4 195 aa17.02■□□□□ 0.32
TPM1-211ENST00000558314 HCFC1R1Q9NWW0 138 aa17.02■□□□□ 0.32
TPM1-211ENST00000558314 ARHGAP28Q9P2N2 729 aa17.02■□□□□ 0.32
TPM1-211ENST00000558314 RBM19Q9Y4C8 960 aaKnown RBP17.02■□□□□ 0.32
TPM1-211ENST00000558314 HNRNPA1P09651 372 aaKnown RBP eCLIP17.01■□□□□ 0.31
TPM1-211ENST00000558314 PLA2G4BP0C869 781 aa17.01■□□□□ 0.31
TPM1-211ENST00000558314 MCF2P10911 925 aa17.01■□□□□ 0.31
TPM1-211ENST00000558314 AOC1P19801 751 aa17.01■□□□□ 0.31
TPM1-211ENST00000558314 FGFR3P22607 806 aa17.01■□□□□ 0.31
TPM1-211ENST00000558314 NUBP1P53384 320 aa17.01■□□□□ 0.31
TPM1-211ENST00000558314 SMTNP53814 917 aa17.01■□□□□ 0.31
TPM1-211ENST00000558314 RSPO2Q6UXX9 243 aaPredicted RBP17.01■□□□□ 0.31
TPM1-211ENST00000558314 DDX27Q96GQ7 796 aaKnown RBP17.01■□□□□ 0.31
TPM1-211ENST00000558314 SNX27Q96L92 541 aa17.01■□□□□ 0.31
TPM1-211ENST00000558314 RHOBTB2Q9BYZ6 727 aa17.01■□□□□ 0.31
TPM1-211ENST00000558314 SLC38A7Q9NVC3 462 aa17.01■□□□□ 0.31
TPM1-211ENST00000558314 MTRRQ9UBK8 725 aa17.01■□□□□ 0.31
TPM1-211ENST00000558314 KRBA1A5PL33 1030 aa17■□□□□ 0.31
TPM1-211ENST00000558314 TULP1O00294 542 aaPredicted RBP17■□□□□ 0.31
TPM1-211ENST00000558314 C1RP00736 705 aa17■□□□□ 0.31
TPM1-211ENST00000558314 SRFP11831 508 aa17■□□□□ 0.31
TPM1-211ENST00000558314 PLS3P13797 630 aa17■□□□□ 0.31
TPM1-211ENST00000558314 ELF1P32519 619 aa17■□□□□ 0.31
TPM1-211ENST00000558314 SPAG1Q07617 926 aa17■□□□□ 0.31
TPM1-211ENST00000558314 HTR4Q13639 388 aa17■□□□□ 0.31
TPM1-211ENST00000558314 RAB33AQ14088 237 aa17■□□□□ 0.31
TPM1-211ENST00000558314 PARM1Q6UWI2 310 aa17■□□□□ 0.31
TPM1-211ENST00000558314 CD300LGQ6UXG3 332 aa17■□□□□ 0.31
TPM1-211ENST00000558314 ANKS3Q6ZW76 656 aa17■□□□□ 0.31
TPM1-211ENST00000558314 FRMD5Q7Z6J6 570 aa17■□□□□ 0.31
TPM1-211ENST00000558314 ITFG1Q8TB96 612 aa17■□□□□ 0.31
TPM1-211ENST00000558314 ZMAT2Q96NC0 199 aaKnown RBP17■□□□□ 0.31
TPM1-211ENST00000558314 RTP3Q9BQQ7 232 aa17■□□□□ 0.31
TPM1-211ENST00000558314 RPP25Q9BUL9 199 aaKnown RBP17■□□□□ 0.31
TPM1-211ENST00000558314 ZHX3Q9H4I2 956 aa17■□□□□ 0.31
TPM1-211ENST00000558314 TBC1D17Q9HA65 648 aa17■□□□□ 0.31
TPM1-211ENST00000558314 PTPRHQ9HD43 1115 aa17■□□□□ 0.31
TPM1-211ENST00000558314 CDH7Q9ULB5 785 aa17■□□□□ 0.31
TPM1-211ENST00000558314 TMEM189-UBE2V1I3L0A0 370 aa16.99■□□□□ 0.31
TPM1-211ENST00000558314 PRRG1O14668 218 aa16.99■□□□□ 0.31
TPM1-211ENST00000558314 KRT18P05783 430 aaKnown RBP16.99■□□□□ 0.31
TPM1-211ENST00000558314 GUCY2CP25092 1073 aa16.99■□□□□ 0.31
TPM1-211ENST00000558314 MCM4P33991 863 aa16.99■□□□□ 0.31
TPM1-211ENST00000558314 NOLC1Q14978 699 aaKnown RBP eCLIP16.99■□□□□ 0.31
TPM1-211ENST00000558314 PABPC1LQ4VXU2 614 aaKnown RBP16.99■□□□□ 0.31
TPM1-211ENST00000558314 VARS2Q5ST30 1063 aaKnown RBP16.99■□□□□ 0.31
TPM1-211ENST00000558314 LARP1BQ659C4 914 aaKnown RBP16.99■□□□□ 0.31
TPM1-211ENST00000558314 SYT2Q8N9I0 419 aaPredicted RBP16.99■□□□□ 0.31
TPM1-211ENST00000558314 FGF13Q92913 245 aa16.99■□□□□ 0.31
TPM1-211ENST00000558314 NXPE3Q969Y0 559 aa16.99■□□□□ 0.31
TPM1-211ENST00000558314 TIPINQ9BVW5 301 aa16.99■□□□□ 0.31
TPM1-211ENST00000558314 C17orf75Q9HAS0 396 aa16.99■□□□□ 0.31
TPM1-211ENST00000558314 WNT16Q9UBV4 365 aa16.99■□□□□ 0.31
TPM1-211ENST00000558314 MTCL1Q9Y4B5 1905 aaKnown RBP16.99■□□□□ 0.31
TPM1-211ENST00000558314 CACNA1HO95180 2353 aa16.98■□□□□ 0.31
TPM1-211ENST00000558314 LRG1P02750 347 aa16.98■□□□□ 0.31
TPM1-211ENST00000558314 UBA7P41226 1012 aa16.98■□□□□ 0.31
TPM1-211ENST00000558314 SLC12A3P55017 1021 aa16.98■□□□□ 0.31
TPM1-211ENST00000558314 ALKAL1Q6UXT8 129 aa16.98■□□□□ 0.31
TPM1-211ENST00000558314 GPBP1Q86WP2 473 aa16.98■□□□□ 0.31
TPM1-211ENST00000558314 TMEM130Q8N3G9 435 aa16.98■□□□□ 0.31
TPM1-211ENST00000558314 DTWD2Q8NBA8 298 aa16.98■□□□□ 0.31
TPM1-211ENST00000558314 TMEM161BQ8NDZ6 487 aa16.98■□□□□ 0.31
TPM1-211ENST00000558314 FGF14Q92915 247 aa16.98■□□□□ 0.31
TPM1-211ENST00000558314 CALML4Q96GE6 196 aa16.98■□□□□ 0.31
TPM1-211ENST00000558314 KXD1Q9BQD3 176 aa16.98■□□□□ 0.31
TPM1-211ENST00000558314 ARHGEF3Q9NR81 526 aa16.98■□□□□ 0.31
TPM1-211ENST00000558314 DNMT3BQ9UBC3 853 aaKnown RBP16.98■□□□□ 0.31
TPM1-211ENST00000558314 MRPS23Q9Y3D9 190 aaKnown RBP16.98■□□□□ 0.31
TPM1-211ENST00000558314 BACE2Q9Y5Z0 518 aa16.98■□□□□ 0.31
TPM1-211ENST00000558314 VWA8A3KMH1 1905 aa16.98■□□□□ 0.31
TPM1-211ENST00000558314 TRIP11Q15643 1979 aa16.97■□□□□ 0.31
TPM1-211ENST00000558314 ANHXE9PGG2 379 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms