RNA–Protein interactions for RNA: ENST00000557725.5

LGMN-219, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-219ENST00000557725 NT5DC1Q5TFE4 455 aa12.79□□□□□ -0.36
LGMN-219ENST00000557725 TANGO2Q6ICL3 276 aa12.79□□□□□ -0.36
LGMN-219ENST00000557725 MTSS1LQ765P7 747 aa12.79□□□□□ -0.36
LGMN-219ENST00000557725 NSUN7Q8NE18 718 aaKnown RBP12.79□□□□□ -0.36
LGMN-219ENST00000557725 TCEAL4Q96EI5 215 aa12.79□□□□□ -0.36
LGMN-219ENST00000557725 DDX27Q96GQ7 796 aaKnown RBP12.79□□□□□ -0.36
LGMN-219ENST00000557725 SHDQ96IW2 340 aa12.79□□□□□ -0.36
LGMN-219ENST00000557725 PRIMPOLQ96LW4 560 aa12.79□□□□□ -0.36
LGMN-219ENST00000557725 PPP1R10Q96QC0 940 aaKnown RBP12.79□□□□□ -0.36
LGMN-219ENST00000557725 BCO2Q9BYV7 579 aa12.79□□□□□ -0.36
LGMN-219ENST00000557725 BRMS1Q9HCU9 246 aa12.79□□□□□ -0.36
LGMN-219ENST00000557725 MTRRQ9UBK8 725 aa12.79□□□□□ -0.36
LGMN-219ENST00000557725 ZFP37Q9Y6Q3 630 aaPredicted RBP12.79□□□□□ -0.36
LGMN-219ENST00000557725 TICRRQ7Z2Z1 1910 aa12.78□□□□□ -0.36
LGMN-219ENST00000557725 ACKR2O00590 384 aa12.78□□□□□ -0.36
LGMN-219ENST00000557725 EPB41L2O43491 1005 aaKnown RBP12.78□□□□□ -0.36
LGMN-219ENST00000557725 B3GAT3O94766 335 aa12.78□□□□□ -0.36
LGMN-219ENST00000557725 RHOP08100 348 aa12.78□□□□□ -0.36
LGMN-219ENST00000557725 OSTNP61366 133 aa12.78□□□□□ -0.36
LGMN-219ENST00000557725 PRKCQQ04759 706 aa12.78□□□□□ -0.36
LGMN-219ENST00000557725 GRM2Q14416 872 aa12.78□□□□□ -0.36
LGMN-219ENST00000557725 PUM1Q14671 1186 aaKnown RBP eCLIP12.78□□□□□ -0.36
LGMN-219ENST00000557725 MAPK6Q16659 721 aa12.78□□□□□ -0.36
LGMN-219ENST00000557725 PADI6Q6TGC4 694 aa12.78□□□□□ -0.36
LGMN-219ENST00000557725 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.78□□□□□ -0.36
LGMN-219ENST00000557725 MCPH1Q8NEM0 835 aa12.78□□□□□ -0.36
LGMN-219ENST00000557725 GTF3C6Q969F1 213 aa12.78□□□□□ -0.36
LGMN-219ENST00000557725 DLL3Q9NYJ7 618 aa12.78□□□□□ -0.36
LGMN-219ENST00000557725 MRPS23Q9Y3D9 190 aaKnown RBP12.78□□□□□ -0.36
LGMN-219ENST00000557725 COL4A2P08572 1712 aa12.78□□□□□ -0.36
LGMN-219ENST00000557725 XRCC6P12956 609 aaKnown RBP eCLIP12.77□□□□□ -0.37
LGMN-219ENST00000557725 FCARP24071 287 aa12.77□□□□□ -0.37
LGMN-219ENST00000557725 CCR2P41597 374 aa12.77□□□□□ -0.37
LGMN-219ENST00000557725 ARPP19P56211 112 aa12.77□□□□□ -0.37
LGMN-219ENST00000557725 ROR1Q01973 937 aa12.77□□□□□ -0.37
LGMN-219ENST00000557725 FZD5Q13467 585 aa12.77□□□□□ -0.37
LGMN-219ENST00000557725 ZNF174Q15697 407 aa12.77□□□□□ -0.37
LGMN-219ENST00000557725 UPP1Q16831 310 aa12.77□□□□□ -0.37
LGMN-219ENST00000557725 VARS2Q5ST30 1063 aaKnown RBP12.77□□□□□ -0.37
LGMN-219ENST00000557725 DEPTORQ8TB45 409 aa12.77□□□□□ -0.37
LGMN-219ENST00000557725 WASF1Q92558 559 aa12.77□□□□□ -0.37
LGMN-219ENST00000557725 C2orf40Q9H1Z8 148 aa12.77□□□□□ -0.37
LGMN-219ENST00000557725 TUFT1Q9NNX1 390 aa12.77□□□□□ -0.37
LGMN-219ENST00000557725 NCDNQ9UBB6 729 aa12.77□□□□□ -0.37
LGMN-219ENST00000557725 NDRG2Q9UN36 371 aaKnown RBP12.77□□□□□ -0.37
LGMN-219ENST00000557725 NCANO14594 1321 aa12.77□□□□□ -0.37
LGMN-219ENST00000557725 WDR27A2RRH5 827 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 ARHGEF35A5YM69 484 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 TMEM189-UBE2V1I3L0A0 370 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 MEFVO15553 781 aaPredicted RBP12.76□□□□□ -0.37
LGMN-219ENST00000557725 SEC24AO95486 1093 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 CYP11B2P19099 503 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 NAMPTP43490 491 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 ELAVL2Q12926 359 aaKnown RBP12.76□□□□□ -0.37
LGMN-219ENST00000557725 MTAPQ13126 283 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 NBR1Q14596 966 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 LPAL2Q16609 132 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 UVSSAQ2YD98 709 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 ZNF528Q3MIS6 628 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 ZBTB41Q5SVQ8 909 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 ATF7IP2Q5U623 682 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 HS6ST3Q8IZP7 471 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 ZSWIM3Q96MP5 696 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 ZMAT2Q96NC0 199 aaKnown RBP12.76□□□□□ -0.37
LGMN-219ENST00000557725 CNTNAP3BQ96NU0 1288 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 NACC1Q96RE7 527 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 CORO1BQ9BR76 489 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 ADPGKQ9BRR6 497 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 POLR3CQ9BUI4 534 aaPredicted RBP12.76□□□□□ -0.37
LGMN-219ENST00000557725 CNTNAP3Q9BZ76 1288 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 PARD6AQ9NPB6 346 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 FBXO4Q9UKT5 387 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 KCNH3Q9ULD8 1083 aa12.76□□□□□ -0.37
LGMN-219ENST00000557725 SMG5Q9UPR3 1016 aaKnown RBP12.76□□□□□ -0.37
LGMN-219ENST00000557725 SMIM28A0A1B0GU29 152 aa12.75□□□□□ -0.37
LGMN-219ENST00000557725 ECI2O75521 394 aa12.75□□□□□ -0.37
LGMN-219ENST00000557725 POU2F2P09086 479 aa12.75□□□□□ -0.37
LGMN-219ENST00000557725 GJA1P17302 382 aa12.75□□□□□ -0.37
LGMN-219ENST00000557725 PFKPQ01813 784 aa12.75□□□□□ -0.37
LGMN-219ENST00000557725 DCAF4L1Q3SXM0 396 aa12.75□□□□□ -0.37
LGMN-219ENST00000557725 FAM78AQ5JUQ0 283 aa12.75□□□□□ -0.37
LGMN-219ENST00000557725 PRSS36Q5K4E3 855 aa12.75□□□□□ -0.37
LGMN-219ENST00000557725 PDXDC1Q6P996 788 aa12.75□□□□□ -0.37
LGMN-219ENST00000557725 ZBTB44Q8NCP5 570 aa12.75□□□□□ -0.37
LGMN-219ENST00000557725 ATRIPQ8WXE1 791 aa12.75□□□□□ -0.37
LGMN-219ENST00000557725 C18orf25Q96B23 403 aaPredicted RBP12.75□□□□□ -0.37
LGMN-219ENST00000557725 CLDN23Q96B33 292 aa12.75□□□□□ -0.37
LGMN-219ENST00000557725 BACE2Q9Y5Z0 518 aa12.75□□□□□ -0.37
LGMN-219ENST00000557725 CITO14578 2027 aa12.74□□□□□ -0.37
LGMN-219ENST00000557725 PDCD11Q14690 1871 aaKnown RBP12.74□□□□□ -0.37
LGMN-219ENST00000557725 PRRG1O14668 218 aa12.74□□□□□ -0.37
LGMN-219ENST00000557725 SPTLC1O15269 473 aa12.74□□□□□ -0.37
LGMN-219ENST00000557725 LILRB5O75023 590 aa12.74□□□□□ -0.37
LGMN-219ENST00000557725 KRT37O76014 449 aa12.74□□□□□ -0.37
LGMN-219ENST00000557725 LRG1P02750 347 aa12.74□□□□□ -0.37
LGMN-219ENST00000557725 HARSP12081 509 aaKnown RBP12.74□□□□□ -0.37
LGMN-219ENST00000557725 RPA1P27694 616 aa12.74□□□□□ -0.37
LGMN-219ENST00000557725 HOXC13P31276 330 aa12.74□□□□□ -0.37
LGMN-219ENST00000557725 RBM25P49756 843 aaKnown RBP12.74□□□□□ -0.37
LGMN-219ENST00000557725 ATXN1P54253 815 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms