RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 ZNF566Q969W8 418 aa3.75□□□□□ -1.81
TRAV28-201ENST00000557548 C18orf8Q96DM3 657 aa3.75□□□□□ -1.81
TRAV28-201ENST00000557548 MSLNLQ96KJ4 702 aa3.75□□□□□ -1.81
TRAV28-201ENST00000557548 WDR92Q96MX6 357 aa3.75□□□□□ -1.81
TRAV28-201ENST00000557548 TMEM209Q96SK2 561 aa3.75□□□□□ -1.81
TRAV28-201ENST00000557548 RMDN3Q96TC7 470 aa3.75□□□□□ -1.81
TRAV28-201ENST00000557548 P2RX7Q99572 595 aaKnown RBP3.75□□□□□ -1.81
TRAV28-201ENST00000557548 C1orf43Q9BWL3 253 aa3.75□□□□□ -1.81
TRAV28-201ENST00000557548 COLEC11Q9BWP8 271 aa3.75□□□□□ -1.81
TRAV28-201ENST00000557548 BRIP1Q9BX63 1249 aa3.75□□□□□ -1.81
TRAV28-201ENST00000557548 STK33Q9BYT3 514 aa3.75□□□□□ -1.81
TRAV28-201ENST00000557548 OSBPL6Q9BZF3 934 aa3.75□□□□□ -1.81
TRAV28-201ENST00000557548 MRPL46Q9H2W6 279 aaKnown RBP3.75□□□□□ -1.81
TRAV28-201ENST00000557548 WDCPQ9H6R7 721 aa3.75□□□□□ -1.81
TRAV28-201ENST00000557548 PAK6Q9NQU5 681 aaPredicted RBP3.75□□□□□ -1.81
TRAV28-201ENST00000557548 TLR9Q9NR96 1032 aa3.75□□□□□ -1.81
TRAV28-201ENST00000557548 MBNL3Q9NUK0 354 aaKnown RBP3.75□□□□□ -1.81
TRAV28-201ENST00000557548 PIH1D1Q9NWS0 290 aaKnown RBP3.75□□□□□ -1.81
TRAV28-201ENST00000557548 CALCOCO1Q9P1Z2 691 aa3.75□□□□□ -1.81
TRAV28-201ENST00000557548 COL20A1Q9P218 1284 aa3.75□□□□□ -1.81
TRAV28-201ENST00000557548 LRFN1Q9P244 771 aa3.75□□□□□ -1.81
TRAV28-201ENST00000557548 SAE1Q9UBE0 346 aaPredicted RBP3.75□□□□□ -1.81
TRAV28-201ENST00000557548 CTNND2Q9UQB3 1225 aa3.75□□□□□ -1.81
TRAV28-201ENST00000557548 NT5C1B-RDH14C9J2C7 533 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 NCAM2O15394 837 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 PLA2G6O60733 806 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 GPR32O75388 356 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 FSBPO95073 299 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 THP07101 528 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 VEGFAP15692 232 aaPredicted RBP3.74□□□□□ -1.81
TRAV28-201ENST00000557548 DDCP20711 480 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 FGFR2P21802 821 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 CFPP27918 469 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 PCSK1P29120 753 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 PRDX5P30044 214 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 MAN1A1P33908 653 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 SREBF1P36956 1147 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 MC3RP41968 323 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 FLT3LGP49771 235 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 STAT5BP51692 787 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 SOX8P57073 446 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 RPS16P62249 146 aaKnown RBP3.74□□□□□ -1.81
TRAV28-201ENST00000557548 HTRA4P83105 476 aaPredicted RBP3.74□□□□□ -1.81
TRAV28-201ENST00000557548 ATP8B2P98198 1209 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 TMEM62Q0P6H9 643 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 GRM1Q13255 1194 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 PRKG1Q13976 671 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 RTP5Q14D33 572 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 MAN2A1Q16706 1144 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 PFKFB4Q16877 469 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 ZACNQ401N2 412 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 GJC2Q5T442 439 aaPredicted RBP3.74□□□□□ -1.81
TRAV28-201ENST00000557548 TMEM200BQ69YZ2 307 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 DPP8Q6V1X1 898 aaPredicted RBP3.74□□□□□ -1.81
TRAV28-201ENST00000557548 CXXC5Q7LFL8 322 aaKnown RBP3.74□□□□□ -1.81
TRAV28-201ENST00000557548 STK32CQ86UX6 486 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 ANKRD18AQ8IVF6 992 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 ATP11CQ8NB49 1132 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 GIMAP8Q8ND71 665 aaPredicted RBP3.74□□□□□ -1.81
TRAV28-201ENST00000557548 OR7D4Q8NG98 312 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 TRAPPC12Q8WVT3 735 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 NKD2Q969F2 451 aaPredicted RBP3.74□□□□□ -1.81
TRAV28-201ENST00000557548 MUL1Q969V5 352 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 SKA1Q96BD8 255 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 IQCDQ96DY2 449 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 INTS4Q96HW7 963 aaKnown RBP3.74□□□□□ -1.81
TRAV28-201ENST00000557548 SUCLG2Q96I99 432 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 TBATAQ96M53 351 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 TMEM120AQ9BXJ8 343 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 TRIM54Q9BYV2 358 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 SENP6Q9GZR1 1112 aaPredicted RBP3.74□□□□□ -1.81
TRAV28-201ENST00000557548 MAGEH1Q9H213 219 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 ADAM7Q9H2U9 754 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 CNTD2Q9H8S5 307 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 BCO1Q9HAY6 547 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 ITM2CQ9NQX7 267 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 LANCL2Q9NS86 450 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 KCND1Q9NSA2 647 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 MYO1AQ9UBC5 1043 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 TRPS1Q9UHF7 1281 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 PGAP2Q9UHJ9 254 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 AJAP1Q9UKB5 411 aaPredicted RBP3.74□□□□□ -1.81
TRAV28-201ENST00000557548 CDC42EP3Q9UKI2 254 aa3.74□□□□□ -1.81
TRAV28-201ENST00000557548 RUVBL1Q9Y265 456 aaKnown RBP3.74□□□□□ -1.81
TRAV28-201ENST00000557548 LRRFIP2Q9Y608 721 aaKnown RBP3.74□□□□□ -1.81
TRAV28-201ENST00000557548 A0A0G2JNJ9 132 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 OR14I1A6ND48 311 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 RRN3P2A6NIE6 340 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 LGALS16A8MUM7 142 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 F2RL2O00254 374 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 ACKR2O00590 384 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 TRIM38O00635 465 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 SUV39H1O43463 412 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 EPB41L2O43491 1005 aaKnown RBP3.73□□□□□ -1.81
TRAV28-201ENST00000557548 RHOBTB3O94955 611 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 CD1AP06126 327 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 PYGLP06737 847 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 RNASE1P07998 156 aaKnown RBP3.73□□□□□ -1.81
TRAV28-201ENST00000557548 FTH1P19P0C7X4 201 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 DHRS4L1P0CG22 281 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms