RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 POMGNT1Q8WZA1 660 aa15.05■□□□□ -0
VPS33B-206ENST00000557358 CCDC47Q96A33 483 aaKnown RBP15.05■□□□□ -0
VPS33B-206ENST00000557358 DNAJC19Q96DA6 116 aa15.05■□□□□ -0
VPS33B-206ENST00000557358 FAM212AQ96EL1 285 aa15.05■□□□□ -0
VPS33B-206ENST00000557358 MSLNLQ96KJ4 702 aa15.05■□□□□ -0
VPS33B-206ENST00000557358 NECTIN4Q96NY8 510 aa15.05■□□□□ -0
VPS33B-206ENST00000557358 KBTBD4Q9NVX7 518 aa15.05■□□□□ -0
VPS33B-206ENST00000557358 TBC1D7Q9P0N9 293 aa15.05■□□□□ -0
VPS33B-206ENST00000557358 CLEC1BQ9P126 229 aa15.05■□□□□ -0
VPS33B-206ENST00000557358 AGO2Q9UKV8 859 aaKnown RBP15.05■□□□□ -0
VPS33B-206ENST00000557358 A0A087X0B3 334 aa15.04■□□□□ -0
VPS33B-206ENST00000557358 TMEM189-UBE2V1I3L0A0 370 aa15.04■□□□□ -0
VPS33B-206ENST00000557358 ABLIM1O14639 778 aa15.04■□□□□ -0
VPS33B-206ENST00000557358 KIF4AO95239 1232 aa15.04■□□□□ -0
VPS33B-206ENST00000557358 GLP2RO95838 553 aa15.04■□□□□ -0
VPS33B-206ENST00000557358 LDHAP00338 332 aaKnown RBP15.04■□□□□ -0
VPS33B-206ENST00000557358 CNPP09543 421 aaKnown RBP15.04■□□□□ -0
VPS33B-206ENST00000557358 CXCL8P10145 99 aa15.04■□□□□ -0
VPS33B-206ENST00000557358 ZC2HC1CQ53FD0 456 aaPredicted RBP15.04■□□□□ -0
VPS33B-206ENST00000557358 XKR4Q5GH76 650 aa15.04■□□□□ -0
VPS33B-206ENST00000557358 L1TD1Q5T7N2 865 aaKnown RBP15.04■□□□□ -0
VPS33B-206ENST00000557358 ALKAL1Q6UXT8 129 aa15.04■□□□□ -0
VPS33B-206ENST00000557358 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.04■□□□□ -0
VPS33B-206ENST00000557358 ADHFE1Q8IWW8 467 aa15.04■□□□□ -0
VPS33B-206ENST00000557358 HASPINQ8TF76 798 aa15.04■□□□□ -0
VPS33B-206ENST00000557358 LEO1Q8WVC0 666 aaPredicted RBP15.04■□□□□ -0
VPS33B-206ENST00000557358 RABGGTAQ92696 567 aa15.04■□□□□ -0
VPS33B-206ENST00000557358 KIF12Q96FN5 646 aa15.04■□□□□ -0
VPS33B-206ENST00000557358 RIPOR3Q96MK2 946 aa15.04■□□□□ -0
VPS33B-206ENST00000557358 KLHL5Q96PQ7 755 aa15.04■□□□□ -0
VPS33B-206ENST00000557358 GPR62Q9BZJ7 368 aa15.04■□□□□ -0
VPS33B-206ENST00000557358 FNIP2Q9P278 1114 aa15.04■□□□□ -0
VPS33B-206ENST00000557358 UBQLN1Q9UMX0 589 aaKnown RBP15.04■□□□□ -0
VPS33B-206ENST00000557358 A0A0B4J269 797 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 ARHGEF37A1IGU5 675 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 FRMD3A2A2Y4 597 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 TULP1O00294 542 aaPredicted RBP15.03■□□□□ -0
VPS33B-206ENST00000557358 PODXLO00592 558 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 C1RP00736 705 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 CMA1P23946 247 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 MTHFRP42898 656 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 CLCNKBP51801 687 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 POU5F1Q01860 360 aaKnown RBP15.03■□□□□ -0
VPS33B-206ENST00000557358 E2F4Q16254 413 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 UPP1Q16831 310 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 ATAT1Q5SQI0 421 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 KIAA0319Q5VV43 1072 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 GJD3Q8N144 294 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 BEST2Q8NFU1 509 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 STAMQ92783 540 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 FBXL18Q96ME1 805 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 FIZ1Q96SL8 496 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 C7orf25Q9BPX7 421 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 VN1R3Q9BXE9 311 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 TRIM9Q9C026 710 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 SFXN1Q9H9B4 322 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 RXFP1Q9HBX9 757 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 CHST7Q9NS84 486 aa15.03■□□□□ -0
VPS33B-206ENST00000557358 CIZ1Q9ULV3 898 aaPredicted RBP15.03■□□□□ -0
VPS33B-206ENST00000557358 USP15Q9Y4E8 981 aaPredicted RBP15.03■□□□□ -0
VPS33B-206ENST00000557358 TCHHQ07283 1943 aa15.02■□□□□ -0
VPS33B-206ENST00000557358 KIAA0391O15091 583 aaKnown RBP15.02■□□□□ -0
VPS33B-206ENST00000557358 TEX28O15482 410 aa15.02■□□□□ -0
VPS33B-206ENST00000557358 MYL1P05976 194 aa15.02■□□□□ -0
VPS33B-206ENST00000557358 SLFN14P0C7P3 912 aa15.02■□□□□ -0
VPS33B-206ENST00000557358 PAX3P23760 479 aa15.02■□□□□ -0
VPS33B-206ENST00000557358 MCM4P33991 863 aa15.02■□□□□ -0
VPS33B-206ENST00000557358 PSMD5Q16401 504 aa15.02■□□□□ -0
VPS33B-206ENST00000557358 SLC10A6Q3KNW5 377 aa15.02■□□□□ -0
VPS33B-206ENST00000557358 SEZ6Q53EL9 994 aa15.02■□□□□ -0
VPS33B-206ENST00000557358 CNNM4Q6P4Q7 775 aa15.02■□□□□ -0
VPS33B-206ENST00000557358 ANKS3Q6ZW76 656 aa15.02■□□□□ -0
VPS33B-206ENST00000557358 UNC13DQ70J99 1090 aa15.02■□□□□ -0
VPS33B-206ENST00000557358 TAS1R1Q7RTX1 841 aa15.02■□□□□ -0
VPS33B-206ENST00000557358 RNF168Q8IYW5 571 aaPredicted RBP15.02■□□□□ -0
VPS33B-206ENST00000557358 NECAB3Q96P71 396 aaPredicted RBP15.02■□□□□ -0
VPS33B-206ENST00000557358 PAAF1Q9BRP4 392 aa15.02■□□□□ -0
VPS33B-206ENST00000557358 PHF7Q9BWX1 381 aaPredicted RBP15.02■□□□□ -0
VPS33B-206ENST00000557358 ADAM7Q9H2U9 754 aa15.02■□□□□ -0
VPS33B-206ENST00000557358 PLEKHA4Q9H4M7 779 aa15.02■□□□□ -0
VPS33B-206ENST00000557358 ASB7Q9H672 318 aa15.02■□□□□ -0
VPS33B-206ENST00000557358 DERAQ9Y315 318 aa15.02■□□□□ -0
VPS33B-206ENST00000557358 R3HCC1Q9Y3T6 440 aaKnown RBP15.02■□□□□ -0
VPS33B-206ENST00000557358 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.01□□□□□ -0.01
VPS33B-206ENST00000557358 PVALEFA0A1B0GWK0 134 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 TTC26A0AVF1 554 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 F8W810 466 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 H7C4K7 107 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 LILRB3O75022 631 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 IL18RAPO95256 599 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 EPCAMP16422 314 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 CYP3A5P20815 502 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 GARTP22102 1010 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 SYKP43405 635 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 AFMP43652 599 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 CLCN4P51793 760 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 KCNC3Q14003 757 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 CBX2Q14781 532 aaPredicted RBP15.01□□□□□ -0.01
VPS33B-206ENST00000557358 NAB2Q15742 525 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 FAM26FQ5R3K3 315 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms