RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.91□□□□□ -0.18
PSEN1-221ENST00000557293 PRR23BQ6ZRT6 265 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 HACE1Q8IYU2 909 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 ZSWIM3Q96MP5 696 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 HSD17B14Q9BPX1 270 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 C2orf42Q9NWW7 574 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 SNTG2Q9NY99 539 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 SNX14Q9Y5W7 946 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 BACE2Q9Y5Z0 518 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 CDY1Q9Y6F8 540 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 BAHCC1Q9P281 2608 aa13.91□□□□□ -0.18
PSEN1-221ENST00000557293 NCANO14594 1321 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 CNOT1A5YKK6 2376 aaKnown RBP13.9□□□□□ -0.18
PSEN1-221ENST00000557293 A0A087WWV3 80 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 TBX3O15119 743 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 ABLIM3O94929 683 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 LYPLA2O95372 231 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 THP07101 528 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 RPS6KB1P23443 525 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 CCR3P51677 355 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 SHC2P98077 582 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 ELAVL2Q12926 359 aaKnown RBP13.9□□□□□ -0.18
PSEN1-221ENST00000557293 PDXDC1Q6P996 788 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 VITQ6UXI7 678 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 PPP4R3CPQ6ZMV5 832 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 TPH2Q8IWU9 490 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 FAM3CQ92520 227 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 DDX27Q96GQ7 796 aaKnown RBP13.9□□□□□ -0.18
PSEN1-221ENST00000557293 JAKMIP1Q96N16 626 aaKnown RBP13.9□□□□□ -0.18
PSEN1-221ENST00000557293 ASB16Q96NS5 453 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 IER2Q9BTL4 223 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 TRMT61BQ9BVS5 477 aaKnown RBP13.9□□□□□ -0.18
PSEN1-221ENST00000557293 FZD8Q9H461 694 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 BRD9Q9H8M2 597 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 RXFP3Q9NSD7 469 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 ANGPTL2Q9UKU9 493 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 USP20Q9Y2K6 914 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 ARID2Q68CP9 1835 aa13.9□□□□□ -0.18
PSEN1-221ENST00000557293 TMEM189-UBE2V1I3L0A0 370 aa13.89□□□□□ -0.19
PSEN1-221ENST00000557293 ARNTLO00327 626 aa13.89□□□□□ -0.19
PSEN1-221ENST00000557293 SEC24AO95486 1093 aa13.89□□□□□ -0.19
PSEN1-221ENST00000557293 EDN1P05305 212 aa13.89□□□□□ -0.19
PSEN1-221ENST00000557293 HOXB3P14651 431 aaPredicted RBP13.89□□□□□ -0.19
PSEN1-221ENST00000557293 TKTP29401 623 aaKnown RBP13.89□□□□□ -0.19
PSEN1-221ENST00000557293 SSRP1Q08945 709 aaKnown RBP13.89□□□□□ -0.19
PSEN1-221ENST00000557293 NCAPH2Q6IBW4 605 aa13.89□□□□□ -0.19
PSEN1-221ENST00000557293 GALNT17Q6IS24 598 aa13.89□□□□□ -0.19
PSEN1-221ENST00000557293 KRT25Q7Z3Z0 450 aa13.89□□□□□ -0.19
PSEN1-221ENST00000557293 SKAP1Q86WV1 359 aa13.89□□□□□ -0.19
PSEN1-221ENST00000557293 PDZD7Q9H5P4 517 aa13.89□□□□□ -0.19
PSEN1-221ENST00000557293 ZFP14Q9HCL3 533 aa13.89□□□□□ -0.19
PSEN1-221ENST00000557293 ANKEF1Q9NU02 776 aa13.89□□□□□ -0.19
PSEN1-221ENST00000557293 KCNJ14Q9UNX9 436 aa13.89□□□□□ -0.19
PSEN1-221ENST00000557293 RALGAPA1Q6GYQ0 2036 aa13.89□□□□□ -0.19
PSEN1-221ENST00000557293 WDR27A2RRH5 827 aa13.88□□□□□ -0.19
PSEN1-221ENST00000557293 DGAT1O75907 488 aa13.88□□□□□ -0.19
PSEN1-221ENST00000557293 RECQL4O94761 1208 aa13.88□□□□□ -0.19
PSEN1-221ENST00000557293 MICAL2O94851 1124 aa13.88□□□□□ -0.19
PSEN1-221ENST00000557293 PAPSS2O95340 614 aaPredicted RBP13.88□□□□□ -0.19
PSEN1-221ENST00000557293 VIPR2P41587 438 aa13.88□□□□□ -0.19
PSEN1-221ENST00000557293 LIMK1P53667 647 aa13.88□□□□□ -0.19
PSEN1-221ENST00000557293 PTGDRQ13258 359 aa13.88□□□□□ -0.19
PSEN1-221ENST00000557293 TOB2Q14106 344 aaPredicted RBP13.88□□□□□ -0.19
PSEN1-221ENST00000557293 FAM187BQ17R55 369 aa13.88□□□□□ -0.19
PSEN1-221ENST00000557293 EARS2Q5JPH6 523 aaKnown RBP13.88□□□□□ -0.19
PSEN1-221ENST00000557293 EEF1DP3Q658K8 133 aa13.88□□□□□ -0.19
PSEN1-221ENST00000557293 BLOC1S2Q6QNY1 142 aa13.88□□□□□ -0.19
PSEN1-221ENST00000557293 NEK8Q86SG6 692 aa13.88□□□□□ -0.19
PSEN1-221ENST00000557293 HS6ST3Q8IZP7 471 aa13.88□□□□□ -0.19
PSEN1-221ENST00000557293 SPEM1Q8N4L4 309 aa13.88□□□□□ -0.19
PSEN1-221ENST00000557293 FAM160A2Q8N612 972 aaPredicted RBP13.88□□□□□ -0.19
PSEN1-221ENST00000557293 C3orf58Q8NDZ4 430 aa13.88□□□□□ -0.19
PSEN1-221ENST00000557293 ZNF461Q8TAF7 563 aa13.88□□□□□ -0.19
PSEN1-221ENST00000557293 IRF7Q92985 503 aa13.88□□□□□ -0.19
PSEN1-221ENST00000557293 EIF2AK1Q9BQI3 630 aaKnown RBP13.88□□□□□ -0.19
PSEN1-221ENST00000557293 GPRC5CQ9NQ84 441 aa13.88□□□□□ -0.19
PSEN1-221ENST00000557293 RBM12Q9NTZ6 932 aaKnown RBP13.88□□□□□ -0.19
PSEN1-221ENST00000557293 PIAS3Q9Y6X2 628 aa13.88□□□□□ -0.19
PSEN1-221ENST00000557293 I3L4J1 428 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 DEXIO95424 95 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 GCFC2P16383 781 aaKnown RBP13.87□□□□□ -0.19
PSEN1-221ENST00000557293 PSMC3P17980 439 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 CCNE1P24864 410 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 GDI1P31150 447 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 HSPA4P34932 840 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 CNR2P34972 360 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 BRCC3P46736 316 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 RBM25P49756 843 aaKnown RBP13.87□□□□□ -0.19
PSEN1-221ENST00000557293 RARRES1P49788 294 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 ROR1Q01973 937 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 COL9A2Q14055 689 aaPredicted RBP13.87□□□□□ -0.19
PSEN1-221ENST00000557293 PPP2R5DQ14738 602 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 SF3A2Q15428 464 aaKnown RBP13.87□□□□□ -0.19
PSEN1-221ENST00000557293 BMP2KLQ5H9B9 411 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 SLC8B1Q6J4K2 584 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 LONP2Q86WA8 852 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 POTEDQ86YR6 584 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 NOSTRINQ8IVI9 506 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 TCEAL8Q8IYN2 117 aa13.87□□□□□ -0.19
PSEN1-221ENST00000557293 OXER1Q8TDS5 423 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms