RNA–Protein interactions for RNA: ENST00000557265.5

SNX6-209, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-209ENST00000557265 ORC3Q9UBD5 711 aaPredicted RBP13.58□□□□□ -0.24
SNX6-209ENST00000557265 MRPS17Q9Y2R5 130 aaKnown RBP13.58□□□□□ -0.24
SNX6-209ENST00000557265 GDAQ9Y2T3 454 aa13.58□□□□□ -0.24
SNX6-209ENST00000557265 PRR5-ARHGAP8B1AHC4 643 aa13.57□□□□□ -0.24
SNX6-209ENST00000557265 SPATA31C1P0DKV0 1188 aa13.57□□□□□ -0.24
SNX6-209ENST00000557265 ARHGAP8P85298 464 aa13.57□□□□□ -0.24
SNX6-209ENST00000557265 LMNB2Q03252 620 aa13.57□□□□□ -0.24
SNX6-209ENST00000557265 ADCY1Q08828 1119 aa13.57□□□□□ -0.24
SNX6-209ENST00000557265 MTAPQ13126 283 aa13.57□□□□□ -0.24
SNX6-209ENST00000557265 MAPK6Q16659 721 aa13.57□□□□□ -0.24
SNX6-209ENST00000557265 TANGO2Q6ICL3 276 aa13.57□□□□□ -0.24
SNX6-209ENST00000557265 POTEHQ6S545 545 aa13.57□□□□□ -0.24
SNX6-209ENST00000557265 MCPH1Q8NEM0 835 aa13.57□□□□□ -0.24
SNX6-209ENST00000557265 ADPGKQ9BRR6 497 aa13.57□□□□□ -0.24
SNX6-209ENST00000557265 PRMT8Q9NR22 394 aaPredicted RBP13.57□□□□□ -0.24
SNX6-209ENST00000557265 CDV3Q9UKY7 258 aaKnown RBP13.57□□□□□ -0.24
SNX6-209ENST00000557265 USP18Q9UMW8 372 aa13.57□□□□□ -0.24
SNX6-209ENST00000557265 BACE2Q9Y5Z0 518 aa13.57□□□□□ -0.24
SNX6-209ENST00000557265 DCDC2BA2VCK2 349 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 SHISA7A6NL88 538 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 TMEM189-UBE2V1I3L0A0 370 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 ACKR2O00590 384 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 WNT7AO00755 349 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 EPB41L2O43491 1005 aaKnown RBP13.56□□□□□ -0.24
SNX6-209ENST00000557265 TBC1D4O60343 1298 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 NEMFO60524 1076 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 PFKFB2O60825 505 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 CTDNEP1O95476 244 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 PRKCBP05771 671 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 TGM1P22735 817 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 TKTP29401 623 aaKnown RBP13.56□□□□□ -0.24
SNX6-209ENST00000557265 CLCNKBP51801 687 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 GLRA4Q5JXX5 417 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 EEF1DP3Q658K8 133 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 CD300LGQ6UXG3 332 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 ANKS3Q6ZW76 656 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 CATSPER3Q86XQ3 398 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 BSNDQ8WZ55 320 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 WASF1Q92558 559 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 ELSPBP1Q96BH3 223 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 DDX27Q96GQ7 796 aaKnown RBP13.56□□□□□ -0.24
SNX6-209ENST00000557265 MTMR9Q96QG7 549 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 C2orf40Q9H1Z8 148 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 BRMS1Q9HCU9 246 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 TPCN1Q9ULQ1 816 aa13.56□□□□□ -0.24
SNX6-209ENST00000557265 NDRG2Q9UN36 371 aaKnown RBP13.56□□□□□ -0.24
SNX6-209ENST00000557265 I3L4J1 428 aa13.55□□□□□ -0.24
SNX6-209ENST00000557265 TRAPPC3O43617 180 aa13.55□□□□□ -0.24
SNX6-209ENST00000557265 EDN1P05305 212 aa13.55□□□□□ -0.24
SNX6-209ENST00000557265 FDPSP14324 419 aaKnown RBP13.55□□□□□ -0.24
SNX6-209ENST00000557265 CEBPBP17676 345 aa13.55□□□□□ -0.24
SNX6-209ENST00000557265 PTPN2P17706 415 aa13.55□□□□□ -0.24
SNX6-209ENST00000557265 RBM25P49756 843 aaKnown RBP13.55□□□□□ -0.24
SNX6-209ENST00000557265 GRM2Q14416 872 aa13.55□□□□□ -0.24
SNX6-209ENST00000557265 UPP1Q16831 310 aa13.55□□□□□ -0.24
SNX6-209ENST00000557265 ZNF461Q8TAF7 563 aa13.55□□□□□ -0.24
SNX6-209ENST00000557265 DEPTORQ8TB45 409 aa13.55□□□□□ -0.24
SNX6-209ENST00000557265 PPP1R10Q96QC0 940 aaKnown RBP13.55□□□□□ -0.24
SNX6-209ENST00000557265 CORO1BQ9BR76 489 aa13.55□□□□□ -0.24
SNX6-209ENST00000557265 FAM126AQ9BYI3 521 aaPredicted RBP13.55□□□□□ -0.24
SNX6-209ENST00000557265 CCDC113Q9H0I3 377 aa13.55□□□□□ -0.24
SNX6-209ENST00000557265 GOLGA2P5Q9HBQ8 144 aa13.55□□□□□ -0.24
SNX6-209ENST00000557265 PARD6AQ9NPB6 346 aa13.55□□□□□ -0.24
SNX6-209ENST00000557265 AVENQ9NQS1 362 aaPredicted RBP13.55□□□□□ -0.24
SNX6-209ENST00000557265 GMEB2Q9UKD1 530 aa13.55□□□□□ -0.24
SNX6-209ENST00000557265 DOCK6Q96HP0 2047 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 ARHGEF37A1IGU5 675 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 BTBD18B2RXH4 712 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 MAN2B1O00754 1011 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 MED24O75448 989 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 LRG1P02750 347 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 CYP11B2P19099 503 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 ELF1P32519 619 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 NAMPTP43490 491 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 BRCC3P46736 316 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 ARPP19P56211 112 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 ROR1Q01973 937 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 LPAL2Q16609 132 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 DCAF4L1Q3SXM0 396 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 FAM78AQ5JUQ0 283 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 PADI6Q6TGC4 694 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 ZNF687Q8N1G0 1237 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 C3orf58Q8NDZ4 430 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 DNASE1L2Q92874 299 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 TCEAL4Q96EI5 215 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 UROC1Q96N76 676 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 NACC1Q96RE7 527 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 RTKNQ9BST9 563 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 KIFC3Q9BVG8 833 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 BRD9Q9H8M2 597 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 ZFP14Q9HCL3 533 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 TUFT1Q9NNX1 390 aa13.54□□□□□ -0.24
SNX6-209ENST00000557265 MTCL1Q9Y4B5 1905 aaKnown RBP13.54□□□□□ -0.24
SNX6-209ENST00000557265 TDRD15B5MCY1 1934 aaKnown RBP13.53□□□□□ -0.24
SNX6-209ENST00000557265 FANCMQ8IYD8 2048 aa13.53□□□□□ -0.24
SNX6-209ENST00000557265 NRG2O14511 850 aaPredicted RBP13.53□□□□□ -0.24
SNX6-209ENST00000557265 PRRG1O14668 218 aa13.53□□□□□ -0.24
SNX6-209ENST00000557265 ABLIM3O94929 683 aa13.53□□□□□ -0.24
SNX6-209ENST00000557265 TDGF1P13385 188 aa13.53□□□□□ -0.24
SNX6-209ENST00000557265 FCARP24071 287 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms