RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 CACNA2D4Q7Z3S7 1137 aa25.66■■□□□ 1.7
SIX4-203ENST00000556952 EHBP1Q8NDI1 1231 aa25.66■■□□□ 1.7
SIX4-203ENST00000556952 FBXL13Q8NEE6 735 aa25.66■■□□□ 1.7
SIX4-203ENST00000556952 ZNF830Q96NB3 372 aaPredicted RBP25.66■■□□□ 1.7
SIX4-203ENST00000556952 ACAP3Q96P50 834 aa25.66■■□□□ 1.7
SIX4-203ENST00000556952 DNAJC7Q99615 494 aa25.66■■□□□ 1.7
SIX4-203ENST00000556952 PRO3102Q9H379 93 aa25.66■■□□□ 1.7
SIX4-203ENST00000556952 ASB7Q9H672 318 aa25.66■■□□□ 1.7
SIX4-203ENST00000556952 RNF225M0QZC1 329 aaPredicted RBP25.65■■□□□ 1.7
SIX4-203ENST00000556952 TULP1O00294 542 aaPredicted RBP25.65■■□□□ 1.7
SIX4-203ENST00000556952 RFX1P22670 979 aa25.65■■□□□ 1.7
SIX4-203ENST00000556952 FPGSQ05932 587 aa25.65■■□□□ 1.7
SIX4-203ENST00000556952 TMEM192Q8IY95 271 aa25.65■■□□□ 1.7
SIX4-203ENST00000556952 OR8K1Q8NGG5 319 aa25.65■■□□□ 1.7
SIX4-203ENST00000556952 LMO3Q8TAP4 145 aa25.65■■□□□ 1.7
SIX4-203ENST00000556952 EIF2AQ9BY44 585 aaKnown RBP25.65■■□□□ 1.7
SIX4-203ENST00000556952 NUCKS1Q9H1E3 243 aaKnown RBP25.65■■□□□ 1.7
SIX4-203ENST00000556952 TMX1Q9H3N1 280 aa25.65■■□□□ 1.7
SIX4-203ENST00000556952 SIX2Q9NPC8 291 aa25.65■■□□□ 1.7
SIX4-203ENST00000556952 PTPRJQ12913 1337 aa25.65■■□□□ 1.7
SIX4-203ENST00000556952 PDCD11Q14690 1871 aaKnown RBP25.65■■□□□ 1.7
SIX4-203ENST00000556952 C4BPAP04003 597 aaKnown RBP25.65■■□□□ 1.7
SIX4-203ENST00000556952 UCHL3P15374 230 aa25.65■■□□□ 1.7
SIX4-203ENST00000556952 CCZ1BP86790 482 aa25.65■■□□□ 1.7
SIX4-203ENST00000556952 CCZ1P86791 482 aaPredicted RBP25.65■■□□□ 1.7
SIX4-203ENST00000556952 PAK2Q13177 524 aa25.65■■□□□ 1.7
SIX4-203ENST00000556952 TSR1Q2NL82 804 aaKnown RBP25.65■■□□□ 1.7
SIX4-203ENST00000556952 CD302Q8IX05 232 aa25.65■■□□□ 1.7
SIX4-203ENST00000556952 ZNF516Q92618 1163 aa25.65■■□□□ 1.7
SIX4-203ENST00000556952 VWCEQ96DN2 955 aa25.65■■□□□ 1.7
SIX4-203ENST00000556952 FAM212AQ96EL1 285 aa25.65■■□□□ 1.7
SIX4-203ENST00000556952 NAA15Q9BXJ9 866 aaKnown RBP25.65■■□□□ 1.7
SIX4-203ENST00000556952 ERVK-5Q9HDB9 667 aa25.65■■□□□ 1.7
SIX4-203ENST00000556952 APEX2Q9UBZ4 518 aa25.65■■□□□ 1.7
SIX4-203ENST00000556952 ZKSCAN5Q9Y2L8 839 aa25.65■■□□□ 1.7
SIX4-203ENST00000556952 ACTN1P12814 892 aa25.64■■□□□ 1.69
SIX4-203ENST00000556952 SELPP16109 830 aa25.64■■□□□ 1.69
SIX4-203ENST00000556952 FECHP22830 423 aa25.64■■□□□ 1.69
SIX4-203ENST00000556952 POLR2FP61218 127 aaKnown RBP25.64■■□□□ 1.69
SIX4-203ENST00000556952 NFX1Q12986 1120 aaKnown RBP25.64■■□□□ 1.69
SIX4-203ENST00000556952 LPIN1Q14693 890 aa25.64■■□□□ 1.69
SIX4-203ENST00000556952 UBXN11Q5T124 520 aa25.64■■□□□ 1.69
SIX4-203ENST00000556952 LRRC8DQ7L1W4 858 aa25.64■■□□□ 1.69
SIX4-203ENST00000556952 TMEM199Q8N511 208 aa25.64■■□□□ 1.69
SIX4-203ENST00000556952 BAP1Q92560 729 aa25.64■■□□□ 1.69
SIX4-203ENST00000556952 PLEKHA5Q9HAU0 1116 aa25.64■■□□□ 1.69
SIX4-203ENST00000556952 RAB20Q9NX57 234 aa25.64■■□□□ 1.69
SIX4-203ENST00000556952 COLQQ9Y215 455 aaPredicted RBP25.64■■□□□ 1.69
SIX4-203ENST00000556952 LAMA2P24043 3122 aaKnown RBP25.63■■□□□ 1.69
SIX4-203ENST00000556952 GHRP10912 638 aa25.63■■□□□ 1.69
SIX4-203ENST00000556952 DUOXA2Q1HG44 320 aa25.63■■□□□ 1.69
SIX4-203ENST00000556952 TDRD10Q5VZ19 366 aaKnown RBP25.63■■□□□ 1.69
SIX4-203ENST00000556952 LMBRD2Q68DH5 695 aaPredicted RBP25.63■■□□□ 1.69
SIX4-203ENST00000556952 TWF2Q6IBS0 349 aaKnown RBP25.63■■□□□ 1.69
SIX4-203ENST00000556952 NT5DC4Q86YG4 428 aa25.63■■□□□ 1.69
SIX4-203ENST00000556952 TAS1R2Q8TE23 839 aa25.63■■□□□ 1.69
SIX4-203ENST00000556952 BAG1Q99933 345 aaPredicted RBP25.63■■□□□ 1.69
SIX4-203ENST00000556952 UBE2OQ9C0C9 1292 aaKnown RBP25.63■■□□□ 1.69
SIX4-203ENST00000556952 AGO3Q9H9G7 860 aaKnown RBP25.63■■□□□ 1.69
SIX4-203ENST00000556952 PADI3Q9ULW8 664 aa25.63■■□□□ 1.69
SIX4-203ENST00000556952 MYO6Q9UM54 1294 aa25.63■■□□□ 1.69
SIX4-203ENST00000556952 TRIOBPQ9H2D6 2365 aa25.63■■□□□ 1.69
SIX4-203ENST00000556952 LAMA3Q16787 3333 aa25.62■■□□□ 1.69
SIX4-203ENST00000556952 ZC3H11AO75152 810 aaKnown RBP eCLIP25.62■■□□□ 1.69
SIX4-203ENST00000556952 SKILP12757 684 aa25.62■■□□□ 1.69
SIX4-203ENST00000556952 YARSP54577 528 aaKnown RBP25.62■■□□□ 1.69
SIX4-203ENST00000556952 MBTPS1Q14703 1052 aa25.62■■□□□ 1.69
SIX4-203ENST00000556952 GPNMBQ14956 572 aa25.62■■□□□ 1.69
SIX4-203ENST00000556952 SLC10A6Q3KNW5 377 aa25.62■■□□□ 1.69
SIX4-203ENST00000556952 ANKRD36BP1Q96IX9 119 aa25.62■■□□□ 1.69
SIX4-203ENST00000556952 LACTBL1A8MY62 500 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 TMEM191BP0C7N4 346 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 ACRP10323 421 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 CD52P31358 61 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 APBA1Q02410 837 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 BIRC3Q13489 604 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 C16orf59Q7L2K0 433 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 TMEM139Q8IV31 216 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 EFCAB13Q8IY85 973 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 OR5B17Q8NGF7 314 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 NXF3Q9H4D5 531 aaKnown RBP25.61■■□□□ 1.69
SIX4-203ENST00000556952 NLRC4Q9NPP4 1024 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 ZNHIT6Q9NWK9 470 aaKnown RBP25.61■■□□□ 1.69
SIX4-203ENST00000556952 SNTG2Q9NY99 539 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 C2CD2Q9Y426 696 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 FHOD1Q9Y613 1164 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 TNNC2P02585 160 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 ZSCAN20P17040 1043 aaPredicted RBP25.61■■□□□ 1.69
SIX4-203ENST00000556952 HNRNPH3P31942 346 aaKnown RBP25.61■■□□□ 1.69
SIX4-203ENST00000556952 BMP8BP34820 402 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 PIK3CAP42336 1068 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 PPIGQ13427 754 aaKnown RBP eCLIP25.61■■□□□ 1.69
SIX4-203ENST00000556952 PDXDC1Q6P996 788 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 RRAGAQ7L523 313 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 ZSCAN30Q86W11 494 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 SYN2Q92777 582 aaPredicted RBP25.61■■□□□ 1.69
SIX4-203ENST00000556952 SEMA4DQ92854 862 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 OSBPL7Q9BZF2 842 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 MTMR12Q9C0I1 747 aa25.61■■□□□ 1.69
SIX4-203ENST00000556952 PLAGL2Q9UPG8 496 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms