RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 CDY1Q9Y6F8 540 aa13.12□□□□□ -0.31
ACTN1-221ENST00000556571 A0A087WWV3 80 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 FAM205CA6NFA0 338 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 TMEM189-UBE2V1I3L0A0 370 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 TRAPPC3O43617 180 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 B3GAT3O94766 335 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 RHOP08100 348 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 ATP2B1P20020 1258 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 KRT2P35908 639 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 TXKP42681 527 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 NR5A1Q13285 461 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 FZD5Q13467 585 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 ANKS3Q6ZW76 656 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 NOSTRINQ8IVI9 506 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 ING5Q8WYH8 240 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 DNASE1L2Q92874 299 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 TNFRSF25Q93038 417 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 ELSPBP1Q96BH3 223 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 MCRS1Q96EZ8 462 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 RTKNQ9BST9 563 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 PRMT8Q9NR22 394 aaPredicted RBP13.11□□□□□ -0.31
ACTN1-221ENST00000556571 HEBP1Q9NRV9 189 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 CDV3Q9UKY7 258 aaKnown RBP13.11□□□□□ -0.31
ACTN1-221ENST00000556571 MIA3Q5JRA6 1907 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 MYH15Q9Y2K3 1946 aa13.11□□□□□ -0.31
ACTN1-221ENST00000556571 TTLL13PA6NNM8 815 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 ACKR2O00590 384 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 MAN2B1O00754 1011 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 NEMFO60524 1076 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 PFKFB2O60825 505 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 PRKCBP05771 671 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 PTPN2P17706 415 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 NRLP54845 237 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 MTAPQ13126 283 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 DCAF4L1Q3SXM0 396 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 TANGO2Q6ICL3 276 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 TSSK4Q6SA08 328 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 MAMSTRQ6ZN01 415 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 UROC1Q96N76 676 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 MTMR9Q96QG7 549 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 NACC1Q96RE7 527 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 PLA2G2FQ9BZM2 168 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 CXCL16Q9H2A7 254 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 ORC3Q9UBD5 711 aaPredicted RBP13.1□□□□□ -0.31
ACTN1-221ENST00000556571 GMEB2Q9UKD1 530 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 USP18Q9UMW8 372 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 GDAQ9Y2T3 454 aa13.1□□□□□ -0.31
ACTN1-221ENST00000556571 CHD8Q9HCK8 2581 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 ARHGEF37A1IGU5 675 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 MICAL2O94851 1124 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 LRG1P02750 347 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 SPATA31C1P0DKV0 1188 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 TGM1P22735 817 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 TKTP29401 623 aaKnown RBP13.09□□□□□ -0.31
ACTN1-221ENST00000556571 ELF1P32519 619 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 NAMPTP43490 491 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 CLCNKBP51801 687 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 PPP2R5DQ14738 602 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 UPP1Q16831 310 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 SLC5A9Q2M3M2 681 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 CATSPER3Q86XQ3 398 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 ZNF461Q8TAF7 563 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 DEPTORQ8TB45 409 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 DDX27Q96GQ7 796 aaKnown RBP13.09□□□□□ -0.31
ACTN1-221ENST00000556571 PPP1R10Q96QC0 940 aaKnown RBP13.09□□□□□ -0.31
ACTN1-221ENST00000556571 IER2Q9BTL4 223 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 CCDC113Q9H0I3 377 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 BRD9Q9H8M2 597 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 TUFT1Q9NNX1 390 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 RAB23Q9ULC3 237 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 ARID2Q68CP9 1835 aa13.09□□□□□ -0.31
ACTN1-221ENST00000556571 KMT2BQ9UMN6 2715 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-221ENST00000556571 SHISA7A6NL88 538 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 ZNF197O14709 1029 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 KRT37O76014 449 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 CTDNEP1O95476 244 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 CEBPBP17676 345 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 LIG1P18858 919 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 CYP11B2P19099 503 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 IGFBP6P24592 240 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-221ENST00000556571 PPP2R5AQ15172 486 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 GLRA4Q5JXX5 417 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 EEF1DP3Q658K8 133 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 SLC8B1Q6J4K2 584 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 POTEHQ6S545 545 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 PADI6Q6TGC4 694 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 CD300LGQ6UXG3 332 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 APBB1IPQ7Z5R6 666 aaPredicted RBP13.08□□□□□ -0.32
ACTN1-221ENST00000556571 ZNF687Q8N1G0 1237 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 CELF5Q8N6W0 485 aaKnown RBP13.08□□□□□ -0.32
ACTN1-221ENST00000556571 BSNDQ8WZ55 320 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 IRF7Q92985 503 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 TRMT61BQ9BVS5 477 aaKnown RBP13.08□□□□□ -0.32
ACTN1-221ENST00000556571 CHRDQ9H2X0 955 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 ZFP14Q9HCL3 533 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 TPCN1Q9ULQ1 816 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 USP20Q9Y2K6 914 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 COL4A3Q01955 1670 aa13.08□□□□□ -0.32
ACTN1-221ENST00000556571 NOTCH4Q99466 2003 aa13.07□□□□□ -0.32
ACTN1-221ENST00000556571 DCDC2BA2VCK2 349 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms