RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 RIPK2O43353 540 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 SHOX2O60902 331 aaPredicted RBP15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 RAD17O75943 681 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 ECE1P42892 770 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 EVX2Q03828 476 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 TFDP2Q14188 446 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 TRADDQ15628 312 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 LVRNQ6Q4G3 990 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 CCNYQ8ND76 341 aa15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 HEXIM2Q96MH2 286 aaKnown RBP15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 NGRNQ9NPE2 291 aaKnown RBP15.91■□□□□ 0.14
ARHGEF40-207ENST00000556399 MOXD1Q6UVY6 613 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 NUDCD3Q8IVD9 361 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 TATDN2Q93075 761 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 SLC35C1Q96A29 364 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 STAMBPL1Q96FJ0 436 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 WHRNQ9P202 907 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 FAF1Q9UNN5 650 aaPredicted RBP15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 HEY1Q9Y5J3 304 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 O00370 1275 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 SRGAP2CP0DJJ0 459 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 TFDP1Q14186 410 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 TMEM154Q6P9G4 183 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 RGS9BPQ6ZS82 235 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 NKX2-3Q8TAU0 364 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 MAGEB18Q96M61 343 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 RBAKQ9NYW8 714 aaPredicted RBP15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 PHTF1Q9UMS5 762 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 MYO3BQ8WXR4 1341 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 SRRM3A6NNA2 597 aaPredicted RBP15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 ASNSP08243 561 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 FECHP22830 423 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 RPL21P46778 160 aaKnown RBP15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 NOP14P78316 857 aaKnown RBP15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 SURF1Q15526 300 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 PIP4K2CQ8TBX8 421 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 INPP4AQ96PE3 977 aaPredicted RBP15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 SH3GL2Q99962 352 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 GGA2Q9UJY4 613 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 CFLARO15519 480 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 PDZD4Q76G19 769 aaPredicted RBP15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 PGM2Q96G03 612 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 THEGQ9P2T0 379 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 HAO1Q9UJM8 370 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 SSX2IPQ9Y2D8 614 aa15.9■□□□□ 0.14
ARHGEF40-207ENST00000556399 FMN2Q9NZ56 1722 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 CAPN9O14815 690 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 IGBP1P78318 339 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 PPP6R3Q5H9R7 873 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 SWSAP1Q6NVH7 229 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 SP8Q8IXZ3 490 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 KLF6Q99612 283 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 SENP7Q9BQF6 1050 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 TMEM8AQ9HCN3 771 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 AGO2Q9UKV8 859 aaKnown RBP15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 DNAJC8O75937 253 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 PSMC1P62191 440 aaKnown RBP15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 PRR5LQ6MZQ0 368 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 SLC30A9Q6PML9 568 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 CCDC125Q86Z20 511 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 THNSL1Q8IYQ7 743 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 POLR3FQ9H1D9 316 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 KDSRQ06136 332 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 COG2Q14746 738 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 ZNF699Q32M78 642 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 SLC10A5Q5PT55 438 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 PAGR1Q9BTK6 254 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 L3MBTL1Q9Y468 752 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 PCDHB2Q9Y5E7 798 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 ENO1P06733 434 aaKnown RBP15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 BIRC2Q13490 618 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 ZNF667Q5HYK9 610 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 ACAD10Q6JQN1 1059 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 DNAAF3Q8N9W5 541 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 PI4K2AQ9BTU6 479 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 RANBP17Q9H2T7 1088 aaKnown RBP15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 DONSONQ9NYP3 566 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 EPS15L1Q9UBC2 864 aa15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 MAGED2Q9UNF1 606 aaPredicted RBP15.89■□□□□ 0.13
ARHGEF40-207ENST00000556399 ECE2O60344 883 aa15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 SWT1Q5T5J6 900 aaKnown RBP15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 DCAF15Q66K64 600 aa15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 C11orf63Q6NUN7 778 aa15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 FAM149B1Q96BN6 582 aa15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 LRGUKQ96M69 825 aa15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 ASNSD1Q9NWL6 643 aa15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 MRPS35P82673 323 aaKnown RBP15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 MASTLQ96GX5 879 aa15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 SERPINI1Q99574 410 aa15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 WWP1Q9H0M0 922 aa15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 GPC4O75487 556 aa15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 ARL4AP40617 200 aa15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 ELF3P78545 371 aaPredicted RBP15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 ROR1Q01973 937 aa15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 MTM1Q13496 603 aa15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 MDH1BQ5I0G3 518 aa15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 RC3H1Q5TC82 1133 aaKnown RBP15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 ALKBH8Q96BT7 664 aaKnown RBP15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 PURBQ96QR8 312 aaKnown RBP15.88■□□□□ 0.13
ARHGEF40-207ENST00000556399 TIPINQ9BVW5 301 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms