RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 LINC00301Q8NCQ3 95 aa17.54■□□□□ 0.4
SDR39U1-217ENST00000556249 CLDN23Q96B33 292 aa17.54■□□□□ 0.4
SDR39U1-217ENST00000556249 BORCS6Q96GS4 357 aa17.54■□□□□ 0.4
SDR39U1-217ENST00000556249 GMEB2Q9UKD1 530 aa17.54■□□□□ 0.4
SDR39U1-217ENST00000556249 RCOR1Q9UKL0 485 aa17.54■□□□□ 0.4
SDR39U1-217ENST00000556249 GIT1Q9Y2X7 761 aa17.54■□□□□ 0.4
SDR39U1-217ENST00000556249 MORC2Q9Y6X9 1032 aaPredicted RBP17.54■□□□□ 0.4
SDR39U1-217ENST00000556249 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 SHISA7A6NL88 538 aa17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 INO80B-WBP1J3KQ70 363 aa17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 SLC37A4O43826 429 aa17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 TBC1D4O60343 1298 aa17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 CCNT1O60563 726 aaKnown RBP17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 KCNA4P22459 653 aa17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 SLC39A14Q15043 492 aa17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 ZNF174Q15697 407 aa17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 FAM171A1Q5VUB5 890 aa17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 POTEHQ6S545 545 aa17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 NPAS3Q8IXF0 933 aa17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 LNX1Q8TBB1 728 aaPredicted RBP17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 SLC7A14Q8TBB6 771 aa17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 LEO1Q8WVC0 666 aaPredicted RBP17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 MCRS1Q96EZ8 462 aa17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 TRIM6Q9C030 488 aaPredicted RBP17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 RGL1Q9NZL6 768 aa17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 DNMT3BQ9UBC3 853 aaKnown RBP17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 PARP2Q9UGN5 583 aa17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 DDX25Q9UHL0 483 aaKnown RBP17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 NDRG2Q9UN36 371 aaKnown RBP17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 CACNA1GO43497 2377 aa17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 CFAP47Q6ZTR5 3102 aa17.53■□□□□ 0.4
SDR39U1-217ENST00000556249 CASTOR2A6NHX0 329 aa17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 LAD1O00515 517 aa17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 WNT7AO00755 349 aa17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 B4GALT5O43286 388 aa17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 NEMFO60524 1076 aa17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 NPTXRO95502 500 aa17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 HNRNPA1P09651 372 aaKnown RBP eCLIP17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 ARF4P18085 180 aaPredicted RBP17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 YWHABP31946 246 aaKnown RBP17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 MCM4P33991 863 aa17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 MCM7P33993 719 aa17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 RFC5P40937 340 aa17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 PTENP60484 403 aa17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 CREMQ03060 361 aa17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 HSP90AA2PQ14568 343 aaPredicted RBP17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 PTPAQ15257 358 aa17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 PSMD5Q16401 504 aa17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 RSPO2Q6UXX9 243 aaPredicted RBP17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 TTPALQ9BTX7 342 aa17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 PRMT8Q9NR22 394 aaPredicted RBP17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 VAV3Q9UKW4 847 aa17.52■□□□□ 0.4
SDR39U1-217ENST00000556249 SPTLC2O15270 562 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 NCAM2O15394 837 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 PPP6R2O75170 966 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 KIF4AO95239 1232 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 P4HBP07237 508 aaKnown RBP17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 AXLP30530 894 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 MAGEA9P43362 315 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 MBTD1Q05BQ5 628 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 GRIK3Q13003 919 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 AMHR2Q16671 573 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 XKR9Q5GH70 373 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 AXDND1Q5T1B0 1012 aaPredicted RBP17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 ZNF852Q6ZMS4 543 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 PRR23BQ6ZRT6 265 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 GPR65Q8IYL9 337 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 TCP11Q8WWU5 503 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 NELL2Q99435 816 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 MTRQ99707 1265 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 LXNQ9BS40 222 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 CXCL16Q9H2A7 254 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 GDPD2Q9HCC8 539 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 XPNPEP1Q9NQW7 623 aa17.51■□□□□ 0.39
SDR39U1-217ENST00000556249 NOTCH4Q99466 2003 aa17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 SF3B1O75533 1304 aaKnown RBP eCLIP17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 ASAP2O43150 1006 aa17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 XYLBO75191 536 aa17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 PTMSP20962 102 aa17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 IGFBP6P24592 240 aaPredicted RBP17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 RPS9P46781 194 aaKnown RBP17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 ATP2C1P98194 919 aaPredicted RBP17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 ADCY1Q08828 1119 aa17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 NCBP1Q09161 790 aaKnown RBP17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 PTGDRQ13258 359 aa17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 PPP2R5CQ13362 524 aa17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 CTTNQ14247 550 aaKnown RBP17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 SLC5A9Q2M3M2 681 aa17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 PABPC1LQ4VXU2 614 aaKnown RBP17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 TANGO2Q6ICL3 276 aa17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 ASAP3Q8TDY4 903 aa17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 CCDC51Q96ER9 411 aa17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 MRPS23Q9Y3D9 190 aaKnown RBP17.5■□□□□ 0.39
SDR39U1-217ENST00000556249 NRG2O14511 850 aaPredicted RBP17.49■□□□□ 0.39
SDR39U1-217ENST00000556249 SLC30A4O14863 429 aa17.49■□□□□ 0.39
SDR39U1-217ENST00000556249 GDF9O60383 454 aa17.49■□□□□ 0.39
SDR39U1-217ENST00000556249 TDGF1P13385 188 aa17.49■□□□□ 0.39
SDR39U1-217ENST00000556249 PRPHP41219 470 aa17.49■□□□□ 0.39
SDR39U1-217ENST00000556249 CYP4A11Q02928 519 aa17.49■□□□□ 0.39
SDR39U1-217ENST00000556249 GRM2Q14416 872 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms