RNA–Protein interactions for RNA: ENST00000556217.5

SUPT16H-205, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 1,027 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-205ENST00000556217 NAB2Q15742 525 aa17.02■□□□□ 0.32
SUPT16H-205ENST00000556217 PADI6Q6TGC4 694 aa17.02■□□□□ 0.32
SUPT16H-205ENST00000556217 ITFG1Q8TB96 612 aa17.02■□□□□ 0.32
SUPT16H-205ENST00000556217 GTF3C6Q969F1 213 aa17.02■□□□□ 0.32
SUPT16H-205ENST00000556217 UROC1Q96N76 676 aa17.02■□□□□ 0.32
SUPT16H-205ENST00000556217 NCDNQ9UBB6 729 aa17.02■□□□□ 0.32
SUPT16H-205ENST00000556217 MTRRQ9UBK8 725 aa17.02■□□□□ 0.32
SUPT16H-205ENST00000556217 GDAQ9Y2T3 454 aa17.02■□□□□ 0.32
SUPT16H-205ENST00000556217 NOTCH4Q99466 2003 aa17.02■□□□□ 0.32
SUPT16H-205ENST00000556217 FAM170BA6NMN3 283 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 TTLL13PA6NNM8 815 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 SPTLC1O15269 473 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 LRRN2O75325 713 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 B3GAT3O94766 335 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 CYP11B2P19099 503 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 FGFR3P22607 806 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 MCM7P33993 719 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 EFNA5P52803 228 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 VARS2Q5ST30 1063 aaKnown RBP17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 ANKS3Q6ZW76 656 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 NPAS3Q8IXF0 933 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 NECAB1Q8N987 351 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 IFT74Q96LB3 600 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 NELL2Q99435 816 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 KXD1Q9BQD3 176 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 CCDC113Q9H0I3 377 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 GDE1Q9NZC3 331 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 MRPS23Q9Y3D9 190 aaKnown RBP17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 BACE2Q9Y5Z0 518 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 CDY1Q9Y6F8 540 aa17.01■□□□□ 0.31
SUPT16H-205ENST00000556217 PRR5-ARHGAP8B1AHC4 643 aa17■□□□□ 0.31
SUPT16H-205ENST00000556217 WNT7AO00755 349 aa17■□□□□ 0.31
SUPT16H-205ENST00000556217 NCAM2O15394 837 aa17■□□□□ 0.31
SUPT16H-205ENST00000556217 MED24O75448 989 aa17■□□□□ 0.31
SUPT16H-205ENST00000556217 RPA1P27694 616 aa17■□□□□ 0.31
SUPT16H-205ENST00000556217 ARHGAP8P85298 464 aa17■□□□□ 0.31
SUPT16H-205ENST00000556217 SAFBQ15424 915 aaKnown RBP eCLIP17■□□□□ 0.31
SUPT16H-205ENST00000556217 ZBTB41Q5SVQ8 909 aa17■□□□□ 0.31
SUPT16H-205ENST00000556217 MAML2Q8IZL2 1156 aaPredicted RBP17■□□□□ 0.31
SUPT16H-205ENST00000556217 ATRIPQ8WXE1 791 aa17■□□□□ 0.31
SUPT16H-205ENST00000556217 BSNDQ8WZ55 320 aa17■□□□□ 0.31
SUPT16H-205ENST00000556217 TMEM60Q9H2L4 133 aa17■□□□□ 0.31
SUPT16H-205ENST00000556217 LTB4R2Q9NPC1 389 aa17■□□□□ 0.31
SUPT16H-205ENST00000556217 HCFC1R1Q9NWW0 138 aa17■□□□□ 0.31
SUPT16H-205ENST00000556217 BAHCC1Q9P281 2608 aa17■□□□□ 0.31
SUPT16H-205ENST00000556217 DNMT3BQ9UBC3 853 aaKnown RBP17■□□□□ 0.31
SUPT16H-205ENST00000556217 PCDHGA2Q9Y5H1 932 aa17■□□□□ 0.31
SUPT16H-205ENST00000556217 ECI2O75521 394 aa16.99■□□□□ 0.31
SUPT16H-205ENST00000556217 MUTP22033 750 aa16.99■□□□□ 0.31
SUPT16H-205ENST00000556217 CLCNKBP51801 687 aa16.99■□□□□ 0.31
SUPT16H-205ENST00000556217 FOSBP53539 338 aa16.99■□□□□ 0.31
SUPT16H-205ENST00000556217 CSTF1Q05048 431 aaKnown RBP16.99■□□□□ 0.31
SUPT16H-205ENST00000556217 ME3Q16798 604 aa16.99■□□□□ 0.31
SUPT16H-205ENST00000556217 ATF7IP2Q5U623 682 aa16.99■□□□□ 0.31
SUPT16H-205ENST00000556217 EEF1DP3Q658K8 133 aa16.99■□□□□ 0.31
SUPT16H-205ENST00000556217 NSUN7Q8NE18 718 aaKnown RBP16.99■□□□□ 0.31
SUPT16H-205ENST00000556217 ING5Q8WYH8 240 aa16.99■□□□□ 0.31
SUPT16H-205ENST00000556217 KIFAP3Q92845 792 aa16.99■□□□□ 0.31
SUPT16H-205ENST00000556217 SECISBP2LQ93073 1101 aaKnown RBP16.99■□□□□ 0.31
SUPT16H-205ENST00000556217 PPP1R10Q96QC0 940 aaKnown RBP16.99■□□□□ 0.31
SUPT16H-205ENST00000556217 CXCL16Q9H2A7 254 aa16.99■□□□□ 0.31
SUPT16H-205ENST00000556217 CDV3Q9UKY7 258 aaKnown RBP16.99■□□□□ 0.31
SUPT16H-205ENST00000556217 MRPS17Q9Y2R5 130 aaKnown RBP16.99■□□□□ 0.31
SUPT16H-205ENST00000556217 MTF2Q9Y483 593 aaPredicted RBP16.99■□□□□ 0.31
SUPT16H-205ENST00000556217 USP24Q9UPU5 2620 aa16.98■□□□□ 0.31
SUPT16H-205ENST00000556217 LRG1P02750 347 aa16.98■□□□□ 0.31
SUPT16H-205ENST00000556217 YARSP54577 528 aaKnown RBP16.98■□□□□ 0.31
SUPT16H-205ENST00000556217 LMNB2Q03252 620 aa16.98■□□□□ 0.31
SUPT16H-205ENST00000556217 ORC2Q13416 577 aaPredicted RBP16.98■□□□□ 0.31
SUPT16H-205ENST00000556217 UPP1Q16831 310 aa16.98■□□□□ 0.31
SUPT16H-205ENST00000556217 GLRA4Q5JXX5 417 aa16.98■□□□□ 0.31
SUPT16H-205ENST00000556217 HAUS3Q68CZ6 603 aa16.98■□□□□ 0.31
SUPT16H-205ENST00000556217 ZNF852Q6ZMS4 543 aa16.98■□□□□ 0.31
SUPT16H-205ENST00000556217 TPRG1Q6ZUI0 275 aa16.98■□□□□ 0.31
SUPT16H-205ENST00000556217 DDX27Q96GQ7 796 aaKnown RBP16.98■□□□□ 0.31
SUPT16H-205ENST00000556217 AVENQ9NQS1 362 aaPredicted RBP16.98■□□□□ 0.31
SUPT16H-205ENST00000556217 TOPORSQ9NS56 1045 aaPredicted RBP16.98■□□□□ 0.31
SUPT16H-205ENST00000556217 USP20Q9Y2K6 914 aa16.98■□□□□ 0.31
SUPT16H-205ENST00000556217 ZFHX4Q86UP3 3567 aa16.98■□□□□ 0.31
SUPT16H-205ENST00000556217 COL4A3Q01955 1670 aa16.97■□□□□ 0.31
SUPT16H-205ENST00000556217 ATRXP46100 2492 aa16.97■□□□□ 0.31
SUPT16H-205ENST00000556217 PRRG1O14668 218 aa16.97■□□□□ 0.31
SUPT16H-205ENST00000556217 RHOP08100 348 aa16.97■□□□□ 0.31
SUPT16H-205ENST00000556217 OR52Z1P0C646 297 aa16.97■□□□□ 0.31
SUPT16H-205ENST00000556217 PTPN2P17706 415 aa16.97■□□□□ 0.31
SUPT16H-205ENST00000556217 CD72P21854 359 aa16.97■□□□□ 0.31
SUPT16H-205ENST00000556217 TKTP29401 623 aaKnown RBP16.97■□□□□ 0.31
SUPT16H-205ENST00000556217 ELF1P32519 619 aa16.97■□□□□ 0.31
SUPT16H-205ENST00000556217 RPS9P46781 194 aaKnown RBP16.97■□□□□ 0.31
SUPT16H-205ENST00000556217 ZNF461Q8TAF7 563 aa16.97■□□□□ 0.31
SUPT16H-205ENST00000556217 CLDN23Q96B33 292 aa16.97■□□□□ 0.31
SUPT16H-205ENST00000556217 MCRS1Q96EZ8 462 aa16.97■□□□□ 0.31
SUPT16H-205ENST00000556217 RTKNQ9BST9 563 aa16.97■□□□□ 0.31
SUPT16H-205ENST00000556217 CCDC94Q9BW85 323 aaPredicted RBP16.97■□□□□ 0.31
SUPT16H-205ENST00000556217 SLC38A7Q9NVC3 462 aa16.97■□□□□ 0.31
SUPT16H-205ENST00000556217 ZSCAN32Q9NX65 697 aa16.97■□□□□ 0.31
SUPT16H-205ENST00000556217 CITO14578 2027 aa16.96■□□□□ 0.31
SUPT16H-205ENST00000556217 ARHGEF37A1IGU5 675 aa16.96■□□□□ 0.31
SUPT16H-205ENST00000556217 K7ERI5 159 aa16.96■□□□□ 0.31
SUPT16H-205ENST00000556217 JAK2O60674 1132 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms