RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 IQSEC1Q6DN90 963 aa8.9□□□□□ -0.98
LINC00641-201ENST00000555379 COL23A1Q86Y22 540 aaPredicted RBP8.9□□□□□ -0.98
LINC00641-201ENST00000555379 FAM9CQ8IZT9 166 aa8.9□□□□□ -0.98
LINC00641-201ENST00000555379 CXorf38Q8TB03 319 aa8.9□□□□□ -0.98
LINC00641-201ENST00000555379 GDAP1L1Q96MZ0 367 aa8.9□□□□□ -0.98
LINC00641-201ENST00000555379 UROC1Q96N76 676 aa8.9□□□□□ -0.98
LINC00641-201ENST00000555379 SH3BP1Q9Y3L3 701 aa8.9□□□□□ -0.98
LINC00641-201ENST00000555379 PCDHB12Q9Y5F1 795 aa8.9□□□□□ -0.98
LINC00641-201ENST00000555379 PCDHA13Q9Y5I0 950 aa8.9□□□□□ -0.98
LINC00641-201ENST00000555379 NEMP1O14524 444 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 AMHP03971 560 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 MAPRE2Q15555 327 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 MYLK4Q86YV6 388 aaPredicted RBP8.9□□□□□ -0.99
LINC00641-201ENST00000555379 GDAP1Q8TB36 358 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 ASIC4Q96FT7 647 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 PCIF1Q9H4Z3 704 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 OLA1Q9NTK5 396 aaKnown RBP8.9□□□□□ -0.99
LINC00641-201ENST00000555379 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.9□□□□□ -0.99
LINC00641-201ENST00000555379 SSU72P8A0A1W2PR75 194 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 TXNDC9O14530 226 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 CLIC2O15247 247 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 RTN2O75298 545 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 CASP14P31944 242 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 PEX6Q13608 980 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 TRIM60Q495X7 471 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 FSCBQ5H9T9 825 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 HEATR6Q6AI08 1181 aaKnown RBP8.9□□□□□ -0.99
LINC00641-201ENST00000555379 JADE1Q6IE81 842 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 RCOR2Q8IZ40 523 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 RNF149Q8NC42 400 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 BCAS4Q8TDM0 211 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 AFG1LQ8WV93 481 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 SH3GL2Q99962 352 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 SUN2Q9UH99 717 aa8.9□□□□□ -0.99
LINC00641-201ENST00000555379 DBR1Q9UK59 544 aaKnown RBP8.9□□□□□ -0.99
LINC00641-201ENST00000555379 SLC15A5A6NIM6 579 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 SLC16A4O15374 487 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 NDUFA10O95299 355 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 CCDC159P0C7I6 412 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 CYP2D6P10635 497 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 FRA10AC1Q70Z53 315 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 SRBD1Q8N5C6 995 aaKnown RBP8.89□□□□□ -0.99
LINC00641-201ENST00000555379 DCUN1D1Q96GG9 259 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 FAM213AQ9BRX8 229 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 ABHD16BQ9H3Z7 469 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 NHEJ1Q9H9Q4 299 aaPredicted RBP8.89□□□□□ -0.99
LINC00641-201ENST00000555379 TMEM8AQ9HCN3 771 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 LRRIQ3A6PVS8 624 aaPredicted RBP8.89□□□□□ -0.99
LINC00641-201ENST00000555379 SNX2O60749 519 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 MFAP3LO75121 409 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 LMNAP02545 664 aaKnown RBP8.89□□□□□ -0.99
LINC00641-201ENST00000555379 GJA8P48165 433 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 CCT5P48643 541 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 LHX1P48742 406 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 CYP4A22Q5TCH4 519 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 ATF7IP2Q5U623 682 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 TDRD10Q5VZ19 366 aaKnown RBP8.89□□□□□ -0.99
LINC00641-201ENST00000555379 PI16Q6UXB8 463 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 RFFLQ8WZ73 363 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 CASP10Q92851 521 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 NT5C1AQ9BXI3 368 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 TRIM33Q9UPN9 1127 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 DISP2A7MBM2 1401 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 ARHGEF28Q8N1W1 1705 aaKnown RBP8.89□□□□□ -0.99
LINC00641-201ENST00000555379 BRAFP15056 766 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 CYP11B2P19099 503 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 ALDH7A1P49419 539 aaKnown RBP8.89□□□□□ -0.99
LINC00641-201ENST00000555379 TOB2Q14106 344 aaPredicted RBP8.89□□□□□ -0.99
LINC00641-201ENST00000555379 Q4G0T1 1027 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 FAM173BQ6P4H8 233 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 CCNJLQ8IV13 435 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 RIN2Q8WYP3 895 aaPredicted RBP8.89□□□□□ -0.99
LINC00641-201ENST00000555379 NGRNQ9NPE2 291 aaKnown RBP8.89□□□□□ -0.99
LINC00641-201ENST00000555379 PRDM5Q9NQX1 630 aaPredicted RBP8.89□□□□□ -0.99
LINC00641-201ENST00000555379 DKK3Q9UBP4 350 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 ATP5HO75947 161 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 URODP06132 367 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 FLOT2Q14254 428 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 DCAF6Q58WW2 860 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 CYB5R4Q7L1T6 521 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 FBXL16Q8N461 479 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 OPTNQ96CV9 577 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 STK33Q9BYT3 514 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 RWDD3Q9Y3V2 267 aa8.89□□□□□ -0.99
LINC00641-201ENST00000555379 SERPINB9P50453 376 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 PSMC1P62191 440 aaKnown RBP8.88□□□□□ -0.99
LINC00641-201ENST00000555379 RABGAP1LQ5R372 815 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 DEPDC1BQ8WUY9 529 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 SPATA16Q9BXB7 569 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 TRIM31Q9BZY9 425 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 THG1LQ9NWX6 298 aaKnown RBP8.88□□□□□ -0.99
LINC00641-201ENST00000555379 ZNF711Q9Y462 761 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 STK25O00506 426 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 RNASEH1O60930 286 aaKnown RBP8.88□□□□□ -0.99
LINC00641-201ENST00000555379 SEC24BO95487 1268 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 KRT4P19013 534 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 SLC11A2P49281 568 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 PRKCEQ02156 737 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 MKRN3Q13064 507 aaKnown RBP8.88□□□□□ -0.99
LINC00641-201ENST00000555379 MMEL1Q495T6 779 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms