RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ANO4Q32M45 955 aa6.92□□□□□ -1.3
VRK1-203ENST00000555067 RRP12Q5JTH9 1297 aaKnown RBP6.92□□□□□ -1.3
VRK1-203ENST00000555067 BHLHA9Q7RTU4 235 aa6.92□□□□□ -1.3
VRK1-203ENST00000555067 TSPEARQ8WU66 669 aa6.92□□□□□ -1.3
VRK1-203ENST00000555067 JDP2Q8WYK2 163 aa6.92□□□□□ -1.3
VRK1-203ENST00000555067 FATE1Q969F0 183 aa6.92□□□□□ -1.3
VRK1-203ENST00000555067 ORAI2Q96SN7 254 aa6.92□□□□□ -1.3
VRK1-203ENST00000555067 NEU1Q99519 415 aa6.92□□□□□ -1.3
VRK1-203ENST00000555067 REXO4Q9GZR2 422 aaKnown RBP6.92□□□□□ -1.3
VRK1-203ENST00000555067 TMX1Q9H3N1 280 aa6.92□□□□□ -1.3
VRK1-203ENST00000555067 CDKL5O76039 1030 aa6.91□□□□□ -1.3
VRK1-203ENST00000555067 SPDEFO95238 335 aa6.91□□□□□ -1.3
VRK1-203ENST00000555067 CFIP05156 583 aa6.91□□□□□ -1.3
VRK1-203ENST00000555067 ALOX15P16050 662 aaPredicted RBP6.91□□□□□ -1.3
VRK1-203ENST00000555067 FAPQ12884 760 aa6.91□□□□□ -1.3
VRK1-203ENST00000555067 RESTQ13127 1097 aa6.91□□□□□ -1.3
VRK1-203ENST00000555067 ERCC6LQ2NKX8 1250 aa6.91□□□□□ -1.3
VRK1-203ENST00000555067 RD3Q7Z3Z2 195 aa6.91□□□□□ -1.3
VRK1-203ENST00000555067 REPS2Q8NFH8 660 aa6.91□□□□□ -1.3
VRK1-203ENST00000555067 OR56A1Q8NGH5 318 aa6.91□□□□□ -1.3
VRK1-203ENST00000555067 LMBR1Q8WVP7 490 aa6.91□□□□□ -1.3
VRK1-203ENST00000555067 PMM1Q92871 262 aa6.91□□□□□ -1.3
VRK1-203ENST00000555067 UHRF1Q96T88 793 aaPredicted RBP6.91□□□□□ -1.3
VRK1-203ENST00000555067 GREM2Q9H772 168 aa6.91□□□□□ -1.3
VRK1-203ENST00000555067 IFT122Q9HBG6 1241 aa6.91□□□□□ -1.3
VRK1-203ENST00000555067 RBM12Q9NTZ6 932 aaKnown RBP6.91□□□□□ -1.3
VRK1-203ENST00000555067 MOCS1Q9NZB8 636 aa6.91□□□□□ -1.3
VRK1-203ENST00000555067 SCOCQ9UIL1 159 aa6.91□□□□□ -1.3
VRK1-203ENST00000555067 EPN1Q9Y6I3 576 aaPredicted RBP6.91□□□□□ -1.3
VRK1-203ENST00000555067 GOLGA8AA7E2F4 631 aa6.9□□□□□ -1.3
VRK1-203ENST00000555067 IL2RBP14784 551 aa6.9□□□□□ -1.3
VRK1-203ENST00000555067 TYRP1P17643 537 aa6.9□□□□□ -1.3
VRK1-203ENST00000555067 SEC24CP53992 1094 aa6.9□□□□□ -1.3
VRK1-203ENST00000555067 TP53BP2Q13625 1128 aa6.9□□□□□ -1.3
VRK1-203ENST00000555067 MUM1L1Q5H9M0 696 aa6.9□□□□□ -1.3
VRK1-203ENST00000555067 Q6ZVL8 140 aa6.9□□□□□ -1.3
VRK1-203ENST00000555067 CHAC2Q8WUX2 184 aa6.9□□□□□ -1.3
VRK1-203ENST00000555067 SLC9A6Q92581 669 aa6.9□□□□□ -1.3
VRK1-203ENST00000555067 ACE2Q9BYF1 805 aaPredicted RBP6.9□□□□□ -1.3
VRK1-203ENST00000555067 QRSL1Q9H0R6 528 aaKnown RBP6.9□□□□□ -1.3
VRK1-203ENST00000555067 LANCL2Q9NS86 450 aa6.9□□□□□ -1.3
VRK1-203ENST00000555067 TYW1Q9NV66 732 aaKnown RBP6.9□□□□□ -1.3
VRK1-203ENST00000555067 RNF181Q9P0P0 153 aa6.9□□□□□ -1.3
VRK1-203ENST00000555067 ZBTB21Q9ULJ3 1066 aa6.9□□□□□ -1.3
VRK1-203ENST00000555067 ATRNL1Q5VV63 1379 aa6.9□□□□□ -1.31
VRK1-203ENST00000555067 FOSP01100 380 aaPredicted RBP6.89□□□□□ -1.31
VRK1-203ENST00000555067 EGR2P11161 476 aaPredicted RBP6.89□□□□□ -1.31
VRK1-203ENST00000555067 SREBF1P36956 1147 aa6.89□□□□□ -1.31
VRK1-203ENST00000555067 PER3P56645 1201 aa6.89□□□□□ -1.31
VRK1-203ENST00000555067 CCT2P78371 535 aaKnown RBP6.89□□□□□ -1.31
VRK1-203ENST00000555067 SPDYE7PQ495Y7 208 aa6.89□□□□□ -1.31
VRK1-203ENST00000555067 KCNK18Q7Z418 384 aa6.89□□□□□ -1.31
VRK1-203ENST00000555067 STRA8Q7Z7C7 330 aa6.89□□□□□ -1.31
VRK1-203ENST00000555067 CCDC146Q8IYE0 955 aa6.89□□□□□ -1.31
VRK1-203ENST00000555067 UBR7Q8N806 425 aa6.89□□□□□ -1.31
VRK1-203ENST00000555067 TGFBRAP1Q8WUH2 860 aa6.89□□□□□ -1.31
VRK1-203ENST00000555067 ASB10Q8WXI3 467 aa6.89□□□□□ -1.31
VRK1-203ENST00000555067 FUBP3Q96I24 572 aaKnown RBP eCLIP6.89□□□□□ -1.31
VRK1-203ENST00000555067 PHACTR3Q96KR7 559 aa6.89□□□□□ -1.31
VRK1-203ENST00000555067 KLHL11Q9NVR0 708 aa6.89□□□□□ -1.31
VRK1-203ENST00000555067 MAP3K2Q9Y2U5 619 aa6.89□□□□□ -1.31
VRK1-203ENST00000555067 SETD1BQ9UPS6 1966 aaKnown RBP6.89□□□□□ -1.31
VRK1-203ENST00000555067 CPEP16870 476 aa6.88□□□□□ -1.31
VRK1-203ENST00000555067 RAP2BP61225 183 aa6.88□□□□□ -1.31
VRK1-203ENST00000555067 ODR4Q5SWX8 454 aa6.88□□□□□ -1.31
VRK1-203ENST00000555067 AFMIDQ63HM1 303 aa6.88□□□□□ -1.31
VRK1-203ENST00000555067 MAPKAPK5Q8IW41 473 aa6.88□□□□□ -1.31
VRK1-203ENST00000555067 SMC5Q8IY18 1101 aa6.88□□□□□ -1.31
VRK1-203ENST00000555067 PQLC1Q8N2U9 271 aa6.88□□□□□ -1.31
VRK1-203ENST00000555067 AFAP1L2Q8N4X5 818 aa6.88□□□□□ -1.31
VRK1-203ENST00000555067 FAM30AQ9NZY2 134 aa6.88□□□□□ -1.31
VRK1-203ENST00000555067 TEX33O43247 280 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 ENDOD1O94919 500 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 RAP2AP10114 183 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 ITGAMP11215 1152 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 ATP5JP18859 108 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 GUCY1A2P33402 732 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 SLC5A3P53794 718 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 TBX4P57082 545 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 EVA1CP58658 441 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 FOXI1Q12951 378 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 MALLQ13021 153 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 MPP3Q13368 585 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 PRR16Q569H4 304 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 CT47A1Q5JQC4 288 aaPredicted RBP6.87□□□□□ -1.31
VRK1-203ENST00000555067 MED25Q71SY5 747 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 CASKIN2Q8WXE0 1202 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 HOXB13Q92826 284 aaPredicted RBP6.87□□□□□ -1.31
VRK1-203ENST00000555067 MRI1Q9BV20 369 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 SENP6Q9GZR1 1112 aaPredicted RBP6.87□□□□□ -1.31
VRK1-203ENST00000555067 RNPEPQ9H4A4 650 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 THRAP3Q9Y2W1 955 aaKnown RBP6.87□□□□□ -1.31
VRK1-203ENST00000555067 INSL6Q9Y581 213 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 NOX1Q9Y5S8 564 aa6.87□□□□□ -1.31
VRK1-203ENST00000555067 PNPLA7Q6ZV29 1317 aa6.86□□□□□ -1.31
VRK1-203ENST00000555067 ESRRBO95718 433 aa6.86□□□□□ -1.31
VRK1-203ENST00000555067 POMCP01189 267 aa6.86□□□□□ -1.31
VRK1-203ENST00000555067 FDXRP22570 491 aa6.86□□□□□ -1.31
VRK1-203ENST00000555067 SCAND1P57086 179 aa6.86□□□□□ -1.31
VRK1-203ENST00000555067 TOR2AQ5JU69 321 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms