RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 N4BP1O75113 896 aaKnown RBP12.13□□□□□ -0.47
SHMT2-216ENST00000554975 CXCL14O95715 111 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 GYPCP04921 128 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 DCNP07585 359 aaKnown RBP12.13□□□□□ -0.47
SHMT2-216ENST00000554975 CFHP08603 1231 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 CASP1P29466 404 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 PPM1AP35813 382 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 USP11P51784 963 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 UBXN1Q04323 297 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 KRT17Q04695 432 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 KIZQ2M2Z5 673 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 ARHGAP29Q52LW3 1261 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 HSP90AA4PQ58FG1 418 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 FIGNQ5HY92 759 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 HYIQ5T013 277 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 TTI2Q6NXR4 508 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 LRRC43Q8N309 656 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 GUF1Q8N442 669 aaKnown RBP12.13□□□□□ -0.47
SHMT2-216ENST00000554975 CSGALNACT2Q8N6G5 542 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 SUMF1Q8NBK3 374 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 RUBCNQ92622 972 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 RAD54LQ92698 747 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 STAMQ92783 540 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 ZBP1Q9H171 429 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 AZI2Q9H6S1 392 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 ELAC1Q9H777 363 aaKnown RBP12.13□□□□□ -0.47
SHMT2-216ENST00000554975 AGO4Q9HCK5 861 aaKnown RBP12.13□□□□□ -0.47
SHMT2-216ENST00000554975 ABHD10Q9NUJ1 306 aa12.13□□□□□ -0.47
SHMT2-216ENST00000554975 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-216ENST00000554975 POTEMA6NI47 508 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 PP2D1A8MPX8 630 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 FAM86B1E9PN63 330 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 STK25O00506 426 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 GPR182O15218 404 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 GPR32O75388 356 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 VTNP04004 478 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 FAM86B2P0C5J1 330 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 SP9P0CG40 484 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 CYLC1P35663 651 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-216ENST00000554975 STAT5BP51692 787 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 ADKP55263 362 aaKnown RBP12.12□□□□□ -0.47
SHMT2-216ENST00000554975 ACTR2P61160 394 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 GNG11P61952 73 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 PRR16Q569H4 304 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 POTEGQ6S5H5 508 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 NIPA1Q7RTP0 329 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 BCL7CQ8WUZ0 217 aaPredicted RBP12.12□□□□□ -0.47
SHMT2-216ENST00000554975 UBXN4Q92575 508 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 ZNF577Q9BSK1 485 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 DZANK1Q9NVP4 752 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 DLGAP2Q9P1A6 1054 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 CA14Q9ULX7 337 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 ATRXP46100 2492 aa12.12□□□□□ -0.47
SHMT2-216ENST00000554975 NFASCO94856 1347 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 A0A1W2PQJ5 194 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 IPO5O00410 1097 aaKnown RBP12.11□□□□□ -0.47
SHMT2-216ENST00000554975 BACH1O14867 736 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 TEX33O43247 280 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 URI1O94763 535 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-216ENST00000554975 CYP3A4P08684 503 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 CASP14P31944 242 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 TXKP42681 527 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 MTIF2P46199 727 aaKnown RBP12.11□□□□□ -0.47
SHMT2-216ENST00000554975 SETQ01105 290 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-216ENST00000554975 ITGB3BPQ13352 177 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-216ENST00000554975 TRIM65Q6PJ69 517 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 PPP4R3CPQ6ZMV5 832 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 CCDC149Q6ZUS6 474 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 PLPPR4Q7Z2D5 763 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 GPR149Q86SP6 731 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 ECHDC2Q86YB7 292 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 VPS52Q8N1B4 723 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 RNF169Q8NCN4 708 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 OR8K1Q8NGG5 319 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 HELQQ8TDG4 1101 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 ACSF2Q96CM8 615 aaPredicted RBP12.11□□□□□ -0.47
SHMT2-216ENST00000554975 CNOT6LQ96LI5 555 aaKnown RBP12.11□□□□□ -0.47
SHMT2-216ENST00000554975 MBOAT7Q96N66 472 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 VN1R3Q9BXE9 311 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 VPS16Q9H269 839 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 TBC1D17Q9HA65 648 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 RALYQ9UKM9 306 aaKnown RBP12.11□□□□□ -0.47
SHMT2-216ENST00000554975 LUC7L2Q9Y383 392 aaKnown RBP12.11□□□□□ -0.47
SHMT2-216ENST00000554975 ADGRG1Q9Y653 693 aa12.11□□□□□ -0.47
SHMT2-216ENST00000554975 CNOT1A5YKK6 2376 aaKnown RBP12.11□□□□□ -0.47
SHMT2-216ENST00000554975 IGLV3-22A0A075B6J6 115 aa12.1□□□□□ -0.47
SHMT2-216ENST00000554975 CYP3A7-CYP3A51PA0A087WV96 503 aa12.1□□□□□ -0.47
SHMT2-216ENST00000554975 PES1O00541 588 aaKnown RBP12.1□□□□□ -0.47
SHMT2-216ENST00000554975 LRRN2O75325 713 aa12.1□□□□□ -0.47
SHMT2-216ENST00000554975 TDP2O95551 362 aa12.1□□□□□ -0.47
SHMT2-216ENST00000554975 GNA14O95837 355 aa12.1□□□□□ -0.47
SHMT2-216ENST00000554975 TUBBP07437 444 aa12.1□□□□□ -0.47
SHMT2-216ENST00000554975 GLULP15104 373 aa12.1□□□□□ -0.47
SHMT2-216ENST00000554975 ATP4AP20648 1035 aa12.1□□□□□ -0.47
SHMT2-216ENST00000554975 CYP3A7P24462 503 aa12.1□□□□□ -0.47
SHMT2-216ENST00000554975 KRT9P35527 623 aa12.1□□□□□ -0.47
SHMT2-216ENST00000554975 CRYBB1P53674 252 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-216ENST00000554975 BCAR1P56945 870 aa12.1□□□□□ -0.47
SHMT2-216ENST00000554975 KRT83P78385 493 aa12.1□□□□□ -0.47
SHMT2-216ENST00000554975 MAN2A1Q16706 1144 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms