RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 TLL1O43897 1013 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 STX10O60499 249 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 EEF1GP26641 437 aaKnown RBP17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 SPAG1Q07617 926 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 TMEM132DQ14C87 1099 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 CDKAL1Q5VV42 579 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 IRF2BP1Q8IU81 584 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 DHX40Q8IX18 779 aaKnown RBP17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 CGRRF1Q99675 332 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 CBX8Q9HC52 389 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 TBC1D13Q9NVG8 400 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 MAGEC2Q9UBF1 373 aaPredicted RBP17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 INPP5FQ9Y2H2 1132 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 PCDHA11Q9Y5I1 949 aa17.82■□□□□ 0.44
SPTLC2-203ENST00000554901 GTF2H1P32780 548 aa17.81■□□□□ 0.44
SPTLC2-203ENST00000554901 AFF1P51825 1210 aaKnown RBP17.81■□□□□ 0.44
SPTLC2-203ENST00000554901 RNASELQ05823 741 aaKnown RBP17.81■□□□□ 0.44
SPTLC2-203ENST00000554901 TUSC3Q13454 348 aa17.81■□□□□ 0.44
SPTLC2-203ENST00000554901 BTG3Q14201 252 aaPredicted RBP17.81■□□□□ 0.44
SPTLC2-203ENST00000554901 JADE1Q6IE81 842 aa17.81■□□□□ 0.44
SPTLC2-203ENST00000554901 FAM117BQ6P1L5 589 aa17.81■□□□□ 0.44
SPTLC2-203ENST00000554901 TMCO2Q7Z6W1 182 aaPredicted RBP17.81■□□□□ 0.44
SPTLC2-203ENST00000554901 TRIM59Q8IWR1 403 aa17.81■□□□□ 0.44
SPTLC2-203ENST00000554901 CCDC127Q96BQ5 260 aa17.81■□□□□ 0.44
SPTLC2-203ENST00000554901 KIF12Q96FN5 646 aa17.81■□□□□ 0.44
SPTLC2-203ENST00000554901 CNOT6LQ96LI5 555 aaKnown RBP17.81■□□□□ 0.44
SPTLC2-203ENST00000554901 UROC1Q96N76 676 aa17.81■□□□□ 0.44
SPTLC2-203ENST00000554901 ZMAT2Q96NC0 199 aaKnown RBP17.81■□□□□ 0.44
SPTLC2-203ENST00000554901 INTS13Q9NVM9 706 aa17.81■□□□□ 0.44
SPTLC2-203ENST00000554901 PTPRSQ13332 1948 aa17.8■□□□□ 0.44
SPTLC2-203ENST00000554901 POMCP01189 267 aa17.8■□□□□ 0.44
SPTLC2-203ENST00000554901 DLATP10515 647 aaKnown RBP17.8■□□□□ 0.44
SPTLC2-203ENST00000554901 TNNI1P19237 187 aa17.8■□□□□ 0.44
SPTLC2-203ENST00000554901 GATMP50440 423 aa17.8■□□□□ 0.44
SPTLC2-203ENST00000554901 TPM4P67936 248 aa17.8■□□□□ 0.44
SPTLC2-203ENST00000554901 DSC1Q08554 894 aa17.8■□□□□ 0.44
SPTLC2-203ENST00000554901 NAB2Q15742 525 aa17.8■□□□□ 0.44
SPTLC2-203ENST00000554901 DUOXA2Q1HG44 320 aa17.8■□□□□ 0.44
SPTLC2-203ENST00000554901 BEST2Q8NFU1 509 aa17.8■□□□□ 0.44
SPTLC2-203ENST00000554901 ANKRD36BP1Q96IX9 119 aa17.8■□□□□ 0.44
SPTLC2-203ENST00000554901 FAM193BQ96PV7 902 aaPredicted RBP17.8■□□□□ 0.44
SPTLC2-203ENST00000554901 TMEM175Q9BSA9 504 aa17.8■□□□□ 0.44
SPTLC2-203ENST00000554901 SAMSN1Q9NSI8 373 aaKnown RBP17.8■□□□□ 0.44
SPTLC2-203ENST00000554901 FANCLQ9NW38 375 aa17.8■□□□□ 0.44
SPTLC2-203ENST00000554901 MIOSQ9NXC5 875 aa17.8■□□□□ 0.44
SPTLC2-203ENST00000554901 PLAGL2Q9UPG8 496 aa17.8■□□□□ 0.44
SPTLC2-203ENST00000554901 LRRIQ3A6PVS8 624 aaPredicted RBP17.79■□□□□ 0.44
SPTLC2-203ENST00000554901 NFICP08651 508 aa17.79■□□□□ 0.44
SPTLC2-203ENST00000554901 ZNF18P17022 549 aa17.79■□□□□ 0.44
SPTLC2-203ENST00000554901 RPL9P32969 192 aaKnown RBP17.79■□□□□ 0.44
SPTLC2-203ENST00000554901 WNT7BP56706 349 aa17.79■□□□□ 0.44
SPTLC2-203ENST00000554901 RAB30Q15771 203 aa17.79■□□□□ 0.44
SPTLC2-203ENST00000554901 GLRA4Q5JXX5 417 aa17.79■□□□□ 0.44
SPTLC2-203ENST00000554901 EFCAB13Q8IY85 973 aa17.79■□□□□ 0.44
SPTLC2-203ENST00000554901 FIBCD1Q8N539 461 aa17.79■□□□□ 0.44
SPTLC2-203ENST00000554901 ANKRD20A12PQ8NF67 263 aa17.79■□□□□ 0.44
SPTLC2-203ENST00000554901 PLEKHO2Q8TD55 490 aa17.79■□□□□ 0.44
SPTLC2-203ENST00000554901 DDX27Q96GQ7 796 aaKnown RBP17.79■□□□□ 0.44
SPTLC2-203ENST00000554901 CXCL16Q9H2A7 254 aa17.79■□□□□ 0.44
SPTLC2-203ENST00000554901 FNDC1Q4ZHG4 1894 aaPredicted RBP17.79■□□□□ 0.44
SPTLC2-203ENST00000554901 KCNJ18B7U540 433 aa17.78■□□□□ 0.44
SPTLC2-203ENST00000554901 GOLGA6L19H0YKK7 550 aa17.78■□□□□ 0.44
SPTLC2-203ENST00000554901 TNNC2P02585 160 aa17.78■□□□□ 0.44
SPTLC2-203ENST00000554901 TMEM191BP0C7N4 346 aa17.78■□□□□ 0.44
SPTLC2-203ENST00000554901 LRPAP1P30533 357 aa17.78■□□□□ 0.44
SPTLC2-203ENST00000554901 SMAD3P84022 425 aaKnown RBP17.78■□□□□ 0.44
SPTLC2-203ENST00000554901 TFAMQ00059 246 aaKnown RBP17.78■□□□□ 0.44
SPTLC2-203ENST00000554901 KCNJ12Q14500 433 aa17.78■□□□□ 0.44
SPTLC2-203ENST00000554901 PAN2Q504Q3 1202 aaKnown RBP17.78■□□□□ 0.44
SPTLC2-203ENST00000554901 TCP11X2Q5H9J9 407 aa17.78■□□□□ 0.44
SPTLC2-203ENST00000554901 CLP1Q92989 425 aaKnown RBP17.78■□□□□ 0.44
SPTLC2-203ENST00000554901 SLC35C1Q96A29 364 aa17.78■□□□□ 0.44
SPTLC2-203ENST00000554901 RWDD3Q9Y3V2 267 aa17.78■□□□□ 0.44
SPTLC2-203ENST00000554901 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.78■□□□□ 0.44
SPTLC2-203ENST00000554901 RANBP2P49792 3224 aaKnown RBP17.78■□□□□ 0.44
SPTLC2-203ENST00000554901 PMM2O15305 246 aa17.77■□□□□ 0.44
SPTLC2-203ENST00000554901 LAG3P18627 525 aa17.77■□□□□ 0.44
SPTLC2-203ENST00000554901 PAX3P23760 479 aa17.77■□□□□ 0.44
SPTLC2-203ENST00000554901 DLG4P78352 724 aa17.77■□□□□ 0.44
SPTLC2-203ENST00000554901 LRIT3Q3SXY7 679 aa17.77■□□□□ 0.44
SPTLC2-203ENST00000554901 C1orf220Q5T0J3 134 aa17.77■□□□□ 0.44
SPTLC2-203ENST00000554901 COLGALT2Q8IYK4 626 aa17.77■□□□□ 0.44
SPTLC2-203ENST00000554901 HSD3B7Q9H2F3 369 aa17.77■□□□□ 0.44
SPTLC2-203ENST00000554901 NRDE2Q9H7Z3 1164 aa17.77■□□□□ 0.44
SPTLC2-203ENST00000554901 AAASQ9NRG9 546 aa17.77■□□□□ 0.44
SPTLC2-203ENST00000554901 MSRAQ9UJ68 235 aa17.77■□□□□ 0.44
SPTLC2-203ENST00000554901 ITGA11Q9UKX5 1188 aa17.77■□□□□ 0.44
SPTLC2-203ENST00000554901 ANK1P16157 1881 aa17.77■□□□□ 0.44
SPTLC2-203ENST00000554901 LRRC10BA6NIK2 292 aa17.77■□□□□ 0.43
SPTLC2-203ENST00000554901 N4BP1O75113 896 aaKnown RBP17.77■□□□□ 0.43
SPTLC2-203ENST00000554901 DDHD2O94830 711 aa17.77■□□□□ 0.43
SPTLC2-203ENST00000554901 MTIF2P46199 727 aaKnown RBP17.77■□□□□ 0.43
SPTLC2-203ENST00000554901 MAN2A1Q16706 1144 aa17.77■□□□□ 0.43
SPTLC2-203ENST00000554901 DCAF17Q5H9S7 520 aaPredicted RBP17.77■□□□□ 0.43
SPTLC2-203ENST00000554901 TCERG1LQ5VWI1 586 aa17.77■□□□□ 0.43
SPTLC2-203ENST00000554901 FAM109BQ6ICB4 259 aaPredicted RBP17.77■□□□□ 0.43
SPTLC2-203ENST00000554901 LUZP1Q86V48 1076 aa17.77■□□□□ 0.43
SPTLC2-203ENST00000554901 ZNF280BQ86YH2 543 aa17.77■□□□□ 0.43
SPTLC2-203ENST00000554901 POP1Q99575 1024 aaKnown RBP17.77■□□□□ 0.43
SPTLC2-203ENST00000554901 MTMR12Q9C0I1 747 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms