RNA–Protein interactions for RNA: ENST00000554843.5

PSMA6-208, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-208ENST00000554843 GAS2L3Q86XJ1 694 aa16.08■□□□□ 0.16
PSMA6-208ENST00000554843 HERC6Q8IVU3 1022 aa16.08■□□□□ 0.16
PSMA6-208ENST00000554843 LRRC43Q8N309 656 aa16.08■□□□□ 0.16
PSMA6-208ENST00000554843 SLC35C1Q96A29 364 aa16.08■□□□□ 0.16
PSMA6-208ENST00000554843 CCDC127Q96BQ5 260 aa16.08■□□□□ 0.16
PSMA6-208ENST00000554843 ZNF689Q96CS4 500 aaPredicted RBP16.08■□□□□ 0.16
PSMA6-208ENST00000554843 FAM212AQ96EL1 285 aa16.08■□□□□ 0.16
PSMA6-208ENST00000554843 ZMAT2Q96NC0 199 aaKnown RBP16.08■□□□□ 0.16
PSMA6-208ENST00000554843 CASD1Q96PB1 797 aa16.08■□□□□ 0.16
PSMA6-208ENST00000554843 PPP1R10Q96QC0 940 aaKnown RBP16.08■□□□□ 0.16
PSMA6-208ENST00000554843 UBQLN1Q9UMX0 589 aaKnown RBP16.08■□□□□ 0.16
PSMA6-208ENST00000554843 INPP5FQ9Y2H2 1132 aa16.08■□□□□ 0.16
PSMA6-208ENST00000554843 SMIM28A0A1B0GU29 152 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 UPP2O95045 317 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 DLATP10515 647 aaKnown RBP16.07■□□□□ 0.16
PSMA6-208ENST00000554843 ATP2A2P16615 1042 aaKnown RBP16.07■□□□□ 0.16
PSMA6-208ENST00000554843 CYP3A5P20815 502 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 GATMP50440 423 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 TMEM132DQ14C87 1099 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 ZBTB6Q15916 424 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 MAN2A1Q16706 1144 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 TCP11X2Q5H9J9 407 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 GLRA4Q5JXX5 417 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 C1orf220Q5T0J3 134 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 JADE1Q6IE81 842 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 CMTR2Q8IYT2 770 aaKnown RBP16.07■□□□□ 0.16
PSMA6-208ENST00000554843 RNF214Q8ND24 703 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 ANKRD20A12PQ8NF67 263 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 KIF12Q96FN5 646 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 CXCL16Q9H2A7 254 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 PRO3102Q9H379 93 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 TBC1D13Q9NVG8 400 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 INTS13Q9NVM9 706 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 PTPRJQ12913 1337 aa16.07■□□□□ 0.16
PSMA6-208ENST00000554843 TBKBP1A7MCY6 615 aa16.06■□□□□ 0.16
PSMA6-208ENST00000554843 STX10O60499 249 aa16.06■□□□□ 0.16
PSMA6-208ENST00000554843 THP07101 528 aa16.06■□□□□ 0.16
PSMA6-208ENST00000554843 TMEM191BP0C7N4 346 aa16.06■□□□□ 0.16
PSMA6-208ENST00000554843 TRIM49P0CI25 452 aa16.06■□□□□ 0.16
PSMA6-208ENST00000554843 TRIM49CP0CI26 452 aa16.06■□□□□ 0.16
PSMA6-208ENST00000554843 TNNI1P19237 187 aa16.06■□□□□ 0.16
PSMA6-208ENST00000554843 GTF2H1P32780 548 aa16.06■□□□□ 0.16
PSMA6-208ENST00000554843 MTIF2P46199 727 aaKnown RBP16.06■□□□□ 0.16
PSMA6-208ENST00000554843 AFF1P51825 1210 aaKnown RBP16.06■□□□□ 0.16
PSMA6-208ENST00000554843 DLG4P78352 724 aa16.06■□□□□ 0.16
PSMA6-208ENST00000554843 DSC1Q08554 894 aa16.06■□□□□ 0.16
PSMA6-208ENST00000554843 NAB2Q15742 525 aa16.06■□□□□ 0.16
PSMA6-208ENST00000554843 DCAF17Q5H9S7 520 aaPredicted RBP16.06■□□□□ 0.16
PSMA6-208ENST00000554843 TMCO2Q7Z6W1 182 aaPredicted RBP16.06■□□□□ 0.16
PSMA6-208ENST00000554843 YME1L1Q96TA2 773 aa16.06■□□□□ 0.16
PSMA6-208ENST00000554843 MIOSQ9NXC5 875 aa16.06■□□□□ 0.16
PSMA6-208ENST00000554843 PLAGL2Q9UPG8 496 aa16.06■□□□□ 0.16
PSMA6-208ENST00000554843 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.06■□□□□ 0.16
PSMA6-208ENST00000554843 N4BP1O75113 896 aaKnown RBP16.05■□□□□ 0.16
PSMA6-208ENST00000554843 POMCP01189 267 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 ATP1A3P13637 1013 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 PRKCSHP14314 528 aaPredicted RBP16.05■□□□□ 0.16
PSMA6-208ENST00000554843 MXI1P50539 228 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 PPP3CAQ08209 521 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 TUSC3Q13454 348 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 KRT31Q15323 416 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 HSP90AA4PQ58FG1 418 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 TCERG1LQ5VWI1 586 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 FAM117BQ6P1L5 589 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 C15orf39Q6ZRI6 1047 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 TDHQ8IZJ6 230 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 BEST2Q8NFU1 509 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 OR5B17Q8NGF7 314 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 SP7Q8TDD2 431 aaPredicted RBP16.05■□□□□ 0.16
PSMA6-208ENST00000554843 CACTINQ8WUQ7 758 aaKnown RBP16.05■□□□□ 0.16
PSMA6-208ENST00000554843 ANKRD36BP1Q96IX9 119 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 TUBGCP2Q9BSJ2 902 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 MTMR12Q9C0I1 747 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 RBSNQ9H1K0 784 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 TMEM8AQ9HCN3 771 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 TUBGCP4Q9UGJ1 667 aa16.05■□□□□ 0.16
PSMA6-208ENST00000554843 LIMA1Q9UHB6 759 aaKnown RBP16.05■□□□□ 0.16
PSMA6-208ENST00000554843 CARNS1A5YM72 827 aa16.04■□□□□ 0.16
PSMA6-208ENST00000554843 PMM2O15305 246 aa16.04■□□□□ 0.16
PSMA6-208ENST00000554843 P4HA2O15460 535 aa16.04■□□□□ 0.16
PSMA6-208ENST00000554843 TNNC2P02585 160 aa16.04■□□□□ 0.16
PSMA6-208ENST00000554843 AFPP02771 609 aaKnown RBP16.04■□□□□ 0.16
PSMA6-208ENST00000554843 LRPAP1P30533 357 aa16.04■□□□□ 0.16
PSMA6-208ENST00000554843 TFAMQ00059 246 aaKnown RBP16.04■□□□□ 0.16
PSMA6-208ENST00000554843 SOX4Q06945 474 aaPredicted RBP16.04■□□□□ 0.16
PSMA6-208ENST00000554843 DUOXA2Q1HG44 320 aa16.04■□□□□ 0.16
PSMA6-208ENST00000554843 ZACNQ401N2 412 aa16.04■□□□□ 0.16
PSMA6-208ENST00000554843 LMBRD2Q68DH5 695 aaPredicted RBP16.04■□□□□ 0.16
PSMA6-208ENST00000554843 APTXQ7Z2E3 356 aaKnown RBP16.04■□□□□ 0.16
PSMA6-208ENST00000554843 RAD9AQ99638 391 aa16.04■□□□□ 0.16
PSMA6-208ENST00000554843 TMEM175Q9BSA9 504 aa16.04■□□□□ 0.16
PSMA6-208ENST00000554843 TAB2Q9NYJ8 693 aa16.04■□□□□ 0.16
PSMA6-208ENST00000554843 INSL6Q9Y581 213 aa16.04■□□□□ 0.16
PSMA6-208ENST00000554843 LRRC10BA6NIK2 292 aa16.03■□□□□ 0.16
PSMA6-208ENST00000554843 TLL1O43897 1013 aa16.03■□□□□ 0.16
PSMA6-208ENST00000554843 C4BPAP04003 597 aaKnown RBP16.03■□□□□ 0.16
PSMA6-208ENST00000554843 TPM2P07951 284 aa16.03■□□□□ 0.16
PSMA6-208ENST00000554843 CDK11BP21127 795 aaKnown RBP16.03■□□□□ 0.16
PSMA6-208ENST00000554843 GCLMP48507 274 aa16.03■□□□□ 0.16
PSMA6-208ENST00000554843 COPB1P53618 953 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms