RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 DNMT3BQ9UBC3 853 aaKnown RBP13.72□□□□□ -0.21
RDH11-207ENST00000554731 BACE2Q9Y5Z0 518 aa13.72□□□□□ -0.21
RDH11-207ENST00000554731 CDY1Q9Y6F8 540 aa13.72□□□□□ -0.21
RDH11-207ENST00000554731 ZNF292O60281 2723 aa13.71□□□□□ -0.21
RDH11-207ENST00000554731 GPR179Q6PRD1 2367 aa13.71□□□□□ -0.21
RDH11-207ENST00000554731 VWA8A3KMH1 1905 aa13.71□□□□□ -0.21
RDH11-207ENST00000554731 K7ERI5 159 aa13.71□□□□□ -0.21
RDH11-207ENST00000554731 EIF5BO60841 1220 aaKnown RBP13.71□□□□□ -0.21
RDH11-207ENST00000554731 LRRN2O75325 713 aa13.71□□□□□ -0.21
RDH11-207ENST00000554731 IGFBP6P24592 240 aaPredicted RBP13.71□□□□□ -0.21
RDH11-207ENST00000554731 TKTP29401 623 aaKnown RBP13.71□□□□□ -0.21
RDH11-207ENST00000554731 YARSP54577 528 aaKnown RBP13.71□□□□□ -0.21
RDH11-207ENST00000554731 ST3GAL1Q11201 340 aa13.71□□□□□ -0.21
RDH11-207ENST00000554731 GNL2Q13823 731 aaKnown RBP13.71□□□□□ -0.21
RDH11-207ENST00000554731 UBXN2BQ14CS0 331 aa13.71□□□□□ -0.21
RDH11-207ENST00000554731 UPP1Q16831 310 aa13.71□□□□□ -0.21
RDH11-207ENST00000554731 TTC38Q5R3I4 469 aa13.71□□□□□ -0.21
RDH11-207ENST00000554731 ING5Q8WYH8 240 aa13.71□□□□□ -0.21
RDH11-207ENST00000554731 DDX27Q96GQ7 796 aaKnown RBP13.71□□□□□ -0.21
RDH11-207ENST00000554731 HINFPQ9BQA5 517 aa13.71□□□□□ -0.21
RDH11-207ENST00000554731 DDX23Q9BUQ8 820 aaKnown RBP13.71□□□□□ -0.21
RDH11-207ENST00000554731 CCDC94Q9BW85 323 aaPredicted RBP13.71□□□□□ -0.21
RDH11-207ENST00000554731 OSBPL6Q9BZF3 934 aa13.71□□□□□ -0.21
RDH11-207ENST00000554731 TOPORSQ9NS56 1045 aaPredicted RBP13.71□□□□□ -0.21
RDH11-207ENST00000554731 TNFSF13BQ9Y275 285 aa13.71□□□□□ -0.21
RDH11-207ENST00000554731 MRPS23Q9Y3D9 190 aaKnown RBP13.71□□□□□ -0.21
RDH11-207ENST00000554731 CACNA1AO00555 2505 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 MYH15Q9Y2K3 1946 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 SMIM28A0A1B0GU29 152 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 CCDC169A6NNP5 214 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 I3L4J1 428 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 NEFLP07196 543 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 GRM5P41594 1212 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 TRAPPC10P48553 1259 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 FXR2P51116 673 aaKnown RBP eCLIP13.7□□□□□ -0.22
RDH11-207ENST00000554731 ECM1Q16610 540 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 CD300LGQ6UXG3 332 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 RSPO2Q6UXX9 243 aaPredicted RBP13.7□□□□□ -0.22
RDH11-207ENST00000554731 KIAA2013Q8IYS2 634 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 C3orf58Q8NDZ4 430 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 RUBCNQ92622 972 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 GOLGA2P5Q9HBQ8 144 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 SLC38A7Q9NVC3 462 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 SPATA6Q9NWH7 488 aaPredicted RBP13.7□□□□□ -0.22
RDH11-207ENST00000554731 GDE1Q9NZC3 331 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 LRWD1Q9UFC0 647 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 KIAA1024Q9UPX6 916 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 STK24Q9Y6E0 443 aa13.7□□□□□ -0.22
RDH11-207ENST00000554731 CEP250Q9BV73 2442 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 FAM170BA6NMN3 283 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 LAMTOR5O43504 91 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 KINO60870 393 aaKnown RBP13.69□□□□□ -0.22
RDH11-207ENST00000554731 ECI2O75521 394 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 LRG1P02750 347 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 RHOP08100 348 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 ELF1P32519 619 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 MAGEA9P43362 315 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 BRCC3P46736 316 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 NPTX2P47972 431 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 ROR1Q01973 937 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 SOX4Q06945 474 aaPredicted RBP13.69□□□□□ -0.22
RDH11-207ENST00000554731 ZNF528Q3MIS6 628 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 ZNF568Q3ZCX4 644 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 CCDC83Q8IWF9 413 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 MAML2Q8IZL2 1156 aaPredicted RBP13.69□□□□□ -0.22
RDH11-207ENST00000554731 FBXO18Q8NFZ0 1043 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 ZNF461Q8TAF7 563 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 MCRS1Q96EZ8 462 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 ACO2Q99798 780 aaKnown RBP13.69□□□□□ -0.22
RDH11-207ENST00000554731 LLPHQ9BRT6 129 aaKnown RBP13.69□□□□□ -0.22
RDH11-207ENST00000554731 MRPL4Q9BYD3 311 aaKnown RBP13.69□□□□□ -0.22
RDH11-207ENST00000554731 CDT1Q9H211 546 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 LTB4R2Q9NPC1 389 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 AVENQ9NQS1 362 aaPredicted RBP13.69□□□□□ -0.22
RDH11-207ENST00000554731 DDX19AQ9NUU7 478 aaKnown RBP13.69□□□□□ -0.22
RDH11-207ENST00000554731 FBXO4Q9UKT5 387 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 NOL7Q9UMY1 257 aaKnown RBP13.69□□□□□ -0.22
RDH11-207ENST00000554731 LIMCH1Q9UPQ0 1083 aa13.69□□□□□ -0.22
RDH11-207ENST00000554731 MTF2Q9Y483 593 aaPredicted RBP13.69□□□□□ -0.22
RDH11-207ENST00000554731 PHLPP2Q6ZVD8 1323 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 ARHGEF37A1IGU5 675 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 PODXLO00592 558 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 PRRG1O14668 218 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 SYN3O14994 580 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 PTPN2P17706 415 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 CD72P21854 359 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 PEX3P56589 373 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 OSTNP61366 133 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 DMP1Q13316 513 aaPredicted RBP13.68□□□□□ -0.22
RDH11-207ENST00000554731 PDIA5Q14554 519 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 SLC5A9Q2M3M2 681 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 XKR4Q5GH76 650 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 VARS2Q5ST30 1063 aaKnown RBP13.68□□□□□ -0.22
RDH11-207ENST00000554731 ZBTB41Q5SVQ8 909 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 SLC8B1Q6J4K2 584 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 ALKAL1Q6UXT8 129 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 TPRG1Q6ZUI0 275 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 C4orf32Q8N8J7 132 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 CEP120Q8N960 986 aa13.68□□□□□ -0.22
RDH11-207ENST00000554731 SNX29Q8TEQ0 813 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms