RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 I3L4J1 428 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 MEFVO15553 781 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-215ENST00000554656 MBD3O95983 291 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 SRFP11831 508 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 MUTP22033 750 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 FGFR3P22607 806 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 SOX4Q06945 474 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-215ENST00000554656 MAPK7Q13164 816 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 PPP2R5AQ15172 486 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 IL17AQ16552 155 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 TMEM132AQ24JP5 1023 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 DCAF4L1Q3SXM0 396 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 ATF7IP2Q5U623 682 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 HAUS3Q68CZ6 603 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 KCNK18Q7Z418 384 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 GRASPQ7Z6J2 395 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-215ENST00000554656 IGSF22Q8N9C0 903 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 DTWD2Q8NBA8 298 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 GPR152Q8TDT2 470 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 ADPGKQ9BRR6 497 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 RUSC1Q9BVN2 902 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 SCAND2PQ9GZW5 306 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-215ENST00000554656 CDT1Q9H211 546 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 TBC1D17Q9HA65 648 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 PIDD1Q9HB75 910 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 LMBRD1Q9NUN5 540 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 DDX19AQ9NUU7 478 aaKnown RBP11.62□□□□□ -0.55
SHMT2-215ENST00000554656 WNT16Q9UBV4 365 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 KIAA1024Q9UPX6 916 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 PCDHB6Q9Y5E3 794 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 NUMBLQ9Y6R0 609 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 DCHS1Q96JQ0 3298 aa11.62□□□□□ -0.55
SHMT2-215ENST00000554656 ABLIM1O14639 778 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 CCL16O15467 120 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 C8AP07357 584 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 FSHRP23945 695 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 U2AF2P26368 475 aaKnown RBP eCLIP11.61□□□□□ -0.55
SHMT2-215ENST00000554656 TKTP29401 623 aaKnown RBP11.61□□□□□ -0.55
SHMT2-215ENST00000554656 CDC25AP30304 524 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 NPTX2P47972 431 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 TRAPPC10P48553 1259 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 CLCNKBP51801 687 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 EFNA5P52803 228 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 PTGDRQ13258 359 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 ANGPT1Q15389 498 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 KLHL40Q2TBA0 621 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 FOXD4L5Q5VV16 416 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-215ENST00000554656 POTEHQ6S545 545 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 PARM1Q6UWI2 310 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-215ENST00000554656 ITFG1Q8TB96 612 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 SNX29Q8TEQ0 813 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 FOXD4L4Q8WXT5 416 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-215ENST00000554656 KIFAP3Q92845 792 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 FGF14Q92915 247 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 NXPE3Q969Y0 559 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 DDX27Q96GQ7 796 aaKnown RBP11.61□□□□□ -0.55
SHMT2-215ENST00000554656 ZNF396Q96N95 335 aaPredicted RBP11.61□□□□□ -0.55
SHMT2-215ENST00000554656 MMTAG2Q9BU76 263 aaKnown RBP11.61□□□□□ -0.55
SHMT2-215ENST00000554656 PTPRHQ9HD43 1115 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 HCFC1R1Q9NWW0 138 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.61□□□□□ -0.55
SHMT2-215ENST00000554656 DLGAP2Q9P1A6 1054 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 MTRRQ9UBK8 725 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 LRWD1Q9UFC0 647 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 CFAP45Q9UL16 551 aa11.61□□□□□ -0.55
SHMT2-215ENST00000554656 PHLPP2Q6ZVD8 1323 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 COL4A2P08572 1712 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 EP300Q09472 2414 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-215ENST00000554656 ANK1P16157 1881 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 E9PMD0 336 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 TRAK2O60296 914 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 HIP1RO75146 1068 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 HNRNPA1P09651 372 aaKnown RBP eCLIP11.6□□□□□ -0.55
SHMT2-215ENST00000554656 HOXA9P31269 272 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 OR1D2P34982 312 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 GRM5P41594 1212 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 BRCC3P46736 316 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 PEX3P56589 373 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 ELAVL2Q12926 359 aaKnown RBP11.6□□□□□ -0.55
SHMT2-215ENST00000554656 RAB33AQ14088 237 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 UPP1Q16831 310 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 XKR4Q5GH76 650 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 PPM1LQ5SGD2 360 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 AXDND1Q5T1B0 1012 aaPredicted RBP11.6□□□□□ -0.55
SHMT2-215ENST00000554656 ALKAL1Q6UXT8 129 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 TMEM130Q8N3G9 435 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 SLC7A14Q8TBB6 771 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 IFT74Q96LB3 600 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 ZMAT2Q96NC0 199 aaKnown RBP11.6□□□□□ -0.55
SHMT2-215ENST00000554656 ACO2Q99798 780 aaKnown RBP11.6□□□□□ -0.55
SHMT2-215ENST00000554656 RTP3Q9BQQ7 232 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 ARHGEF3Q9NR81 526 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 SLC2A4RGQ9NR83 387 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 ARHGAP28Q9P2N2 729 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 CDH7Q9ULB5 785 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 TNFSF13BQ9Y275 285 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 DMXL1Q9Y485 3027 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 FRYLO94915 3013 aa11.6□□□□□ -0.55
SHMT2-215ENST00000554656 OTOGLQ3ZCN5 2332 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms