RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 NR1H3Q13133 447 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 GPS2Q13227 327 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 ADAM9Q13443 819 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 GRM2Q14416 872 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 QPCTQ16769 361 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 EXOC3L4Q17RC7 722 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 NBPF9Q3BBW0 867 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 DNAJC21Q5F1R6 531 aaKnown RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 DAB2IPQ5VWQ8 1189 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 SLFN13Q68D06 897 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 ALKBH5Q6P6C2 394 aaKnown RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 TSHZ1Q6ZSZ6 1077 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 FBXO11Q86XK2 927 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 PALB2Q86YC2 1186 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 NT5DC4Q86YG4 428 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 C2CD5Q86YS7 1000 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 SLC4A11Q8NBS3 891 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 CMASQ8NFW8 434 aaPredicted RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 CCHCR1Q8TD31 782 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 C10orf82Q8WW14 230 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 TEKT4Q8WW24 435 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 MAIP1Q8WWC4 291 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 MAGEB18Q96M61 343 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 CCT8L2Q96SF2 557 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 SIKE1Q9BRV8 207 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 KCNK13Q9HB14 408 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 EIF2B3Q9NR50 452 aaKnown RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 MAGEC2Q9UBF1 373 aaPredicted RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 RGS17Q9UGC6 210 aaPredicted RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 TBX20Q9UMR3 447 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 MRPL11Q9Y3B7 192 aaKnown RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 NPHP3-ACAD11A0A0J9YXS1 232 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 GMNCA6NCL1 334 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 H0YCG3 227 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 SNX3O60493 162 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 STK10O94804 968 aaKnown RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 HEXIM1O94992 359 aaKnown RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 MMP8P22894 467 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 RFC5P40937 340 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 GPC5P78333 572 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 KCNJ11Q14654 390 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 PCBP1Q15365 356 aaKnown RBP eCLIP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 MTFR1Q15390 333 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 TRADDQ15628 312 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 TPRNQ4KMQ1 711 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 C6orf118Q5T5N4 469 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 SLC9A4Q6AI14 798 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 BNC2Q6ZN30 1099 aaPredicted RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 ANO5Q75V66 913 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 PLPPR4Q7Z2D5 763 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 TICAM1Q8IUC6 712 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 PSTKQ8IV42 348 aaKnown RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 SEPT12Q8IYM1 358 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 STK32AQ8WU08 396 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 KIFAP3Q92845 792 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 ACCSQ96QU6 501 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 XPO6Q96QU8 1125 aaKnown RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 CGRRF1Q99675 332 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 RAB17Q9H0T7 212 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 PORCNQ9H237 461 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 LUC7LQ9NQ29 371 aaKnown RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 ASNSD1Q9NWL6 643 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 ARMCX3Q9UH62 379 aaPredicted RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 AFG3L2Q9Y4W6 797 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 FAM169AQ9Y6X4 670 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 RSPH10B2B2RC85 870 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 ANKRD63C9JTQ0 380 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 ZNF195O14628 629 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 EXTL3O43909 919 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 RSPH10BP0C881 870 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 NR2F2P24468 414 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 HNRNPH1P31943 449 aaKnown RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 KRT76Q01546 638 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 SLC14A2Q15849 920 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 UBE2SQ16763 222 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 LETM2Q2VYF4 491 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 AFMIDQ63HM1 303 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 ICE2Q659A1 982 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 RUFY4Q6ZNE9 571 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 RRAGAQ7L523 313 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 EXOC3L1Q86VI1 746 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 CCDC50Q8IVM0 306 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 FUKQ8N0W3 1084 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 AGGF1Q8N302 714 aaeCLIP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 BSNDQ8WZ55 320 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 TBC1D5Q92609 795 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 KHSRPQ92945 711 aaKnown RBP eCLIP3.7□□□□□ -1.822e-7■■■□□ 14.8
SEC23A-207ENST00000554615 OLFM3Q96PB7 478 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 PLCD4Q9BRC7 762 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 FZD8Q9H461 694 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 STN1Q9H668 368 aaKnown RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 GOPCQ9HD26 462 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 SAR1AQ9NR31 198 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 OSER1Q9NX31 292 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 TAS2R14Q9NYV8 317 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 PUF60Q9UHX1 559 aaKnown RBP3.7□□□□□ -1.82
SEC23A-207ENST00000554615 SARDHQ9UL12 918 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 GRID1Q9ULK0 1009 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 SHOC2Q9UQ13 582 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 DNM3Q9UQ16 869 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms