RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 CDY1Q9Y6F8 540 aa26.66■■□□□ 1.86
FOXA1-204ENST00000554607 MIA3Q5JRA6 1907 aa26.66■■□□□ 1.86
FOXA1-204ENST00000554607 OTOGLQ3ZCN5 2332 aa26.65■■□□□ 1.86
FOXA1-204ENST00000554607 DMXL1Q9Y485 3027 aa26.65■■□□□ 1.86
FOXA1-204ENST00000554607 MUTP22033 750 aa26.65■■□□□ 1.86
FOXA1-204ENST00000554607 SAFBQ15424 915 aaKnown RBP eCLIP26.65■■□□□ 1.86
FOXA1-204ENST00000554607 EEF1DP3Q658K8 133 aa26.65■■□□□ 1.86
FOXA1-204ENST00000554607 HCFC1R1Q9NWW0 138 aa26.65■■□□□ 1.86
FOXA1-204ENST00000554607 GDE1Q9NZC3 331 aa26.65■■□□□ 1.86
FOXA1-204ENST00000554607 SPTLC1O15269 473 aa26.64■■□□□ 1.86
FOXA1-204ENST00000554607 NCAM2O15394 837 aa26.64■■□□□ 1.86
FOXA1-204ENST00000554607 ECI2O75521 394 aa26.64■■□□□ 1.86
FOXA1-204ENST00000554607 CLCNKBP51801 687 aa26.64■■□□□ 1.86
FOXA1-204ENST00000554607 FOSBP53539 338 aa26.64■■□□□ 1.86
FOXA1-204ENST00000554607 ZBTB41Q5SVQ8 909 aa26.64■■□□□ 1.86
FOXA1-204ENST00000554607 SUMF1Q8NBK3 374 aa26.64■■□□□ 1.86
FOXA1-204ENST00000554607 PPP1R10Q96QC0 940 aaKnown RBP26.64■■□□□ 1.86
FOXA1-204ENST00000554607 LTB4R2Q9NPC1 389 aa26.64■■□□□ 1.86
FOXA1-204ENST00000554607 USP20Q9Y2K6 914 aa26.64■■□□□ 1.86
FOXA1-204ENST00000554607 MTF2Q9Y483 593 aaPredicted RBP26.64■■□□□ 1.86
FOXA1-204ENST00000554607 VWA8A3KMH1 1905 aa26.64■■□□□ 1.86
FOXA1-204ENST00000554607 FRYLO94915 3013 aa26.63■■□□□ 1.85
FOXA1-204ENST00000554607 ORC2Q13416 577 aaPredicted RBP26.63■■□□□ 1.85
FOXA1-204ENST00000554607 UPP1Q16831 310 aa26.63■■□□□ 1.85
FOXA1-204ENST00000554607 ATF7IP2Q5U623 682 aa26.63■■□□□ 1.85
FOXA1-204ENST00000554607 KIFAP3Q92845 792 aa26.63■■□□□ 1.85
FOXA1-204ENST00000554607 AVENQ9NQS1 362 aaPredicted RBP26.63■■□□□ 1.85
FOXA1-204ENST00000554607 PCDHGA2Q9Y5H1 932 aa26.63■■□□□ 1.85
FOXA1-204ENST00000554607 JAK2O60674 1132 aa26.62■■□□□ 1.85
FOXA1-204ENST00000554607 LARGE1O95461 756 aa26.62■■□□□ 1.85
FOXA1-204ENST00000554607 GLRA4Q5JXX5 417 aa26.62■■□□□ 1.85
FOXA1-204ENST00000554607 HAUS3Q68CZ6 603 aa26.62■■□□□ 1.85
FOXA1-204ENST00000554607 DCLK2Q8N568 766 aa26.62■■□□□ 1.85
FOXA1-204ENST00000554607 ATRIPQ8WXE1 791 aa26.62■■□□□ 1.85
FOXA1-204ENST00000554607 DDX27Q96GQ7 796 aaKnown RBP26.62■■□□□ 1.85
FOXA1-204ENST00000554607 EDN1P05305 212 aa26.61■■□□□ 1.85
FOXA1-204ENST00000554607 RHOP08100 348 aa26.61■■□□□ 1.85
FOXA1-204ENST00000554607 OR52Z1P0C646 297 aa26.61■■□□□ 1.85
FOXA1-204ENST00000554607 PTPN2P17706 415 aa26.61■■□□□ 1.85
FOXA1-204ENST00000554607 TKTP29401 623 aaKnown RBP26.61■■□□□ 1.85
FOXA1-204ENST00000554607 ELF1P32519 619 aa26.61■■□□□ 1.85
FOXA1-204ENST00000554607 YARSP54577 528 aaKnown RBP26.61■■□□□ 1.85
FOXA1-204ENST00000554607 CSTF1Q05048 431 aaKnown RBP26.61■■□□□ 1.85
FOXA1-204ENST00000554607 NT5DC1Q5TFE4 455 aa26.61■■□□□ 1.85
FOXA1-204ENST00000554607 ZNF461Q8TAF7 563 aa26.61■■□□□ 1.85
FOXA1-204ENST00000554607 ING5Q8WYH8 240 aa26.61■■□□□ 1.85
FOXA1-204ENST00000554607 MCRS1Q96EZ8 462 aa26.61■■□□□ 1.85
FOXA1-204ENST00000554607 TOPORSQ9NS56 1045 aaPredicted RBP26.61■■□□□ 1.85
FOXA1-204ENST00000554607 MRPS17Q9Y2R5 130 aaKnown RBP26.61■■□□□ 1.85
FOXA1-204ENST00000554607 NOTCH4Q99466 2003 aa26.6■■□□□ 1.85
FOXA1-204ENST00000554607 K7ERI5 159 aa26.6■■□□□ 1.85
FOXA1-204ENST00000554607 LRG1P02750 347 aa26.6■■□□□ 1.85
FOXA1-204ENST00000554607 VARS2Q5ST30 1063 aaKnown RBP26.6■■□□□ 1.85
FOXA1-204ENST00000554607 CD300LGQ6UXG3 332 aa26.6■■□□□ 1.85
FOXA1-204ENST00000554607 ZNF852Q6ZMS4 543 aa26.6■■□□□ 1.85
FOXA1-204ENST00000554607 GPR161Q8N6U8 529 aaKnown RBP26.6■■□□□ 1.85
FOXA1-204ENST00000554607 CLDN23Q96B33 292 aa26.6■■□□□ 1.85
FOXA1-204ENST00000554607 KIFC3Q9BVG8 833 aa26.6■■□□□ 1.85
FOXA1-204ENST00000554607 CCDC94Q9BW85 323 aaPredicted RBP26.6■■□□□ 1.85
FOXA1-204ENST00000554607 SLC38A7Q9NVC3 462 aa26.6■■□□□ 1.85
FOXA1-204ENST00000554607 DLL3Q9NYJ7 618 aa26.6■■□□□ 1.85
FOXA1-204ENST00000554607 NCDNQ9UBB6 729 aa26.6■■□□□ 1.85
FOXA1-204ENST00000554607 TNFSF13BQ9Y275 285 aa26.6■■□□□ 1.85
FOXA1-204ENST00000554607 SMIM28A0A1B0GU29 152 aa26.59■■□□□ 1.85
FOXA1-204ENST00000554607 ARHGEF37A1IGU5 675 aa26.59■■□□□ 1.85
FOXA1-204ENST00000554607 CD72P21854 359 aa26.59■■□□□ 1.85
FOXA1-204ENST00000554607 IGFBP6P24592 240 aaPredicted RBP26.59■■□□□ 1.85
FOXA1-204ENST00000554607 RPS9P46781 194 aaKnown RBP26.59■■□□□ 1.85
FOXA1-204ENST00000554607 ZNF174Q15697 407 aa26.59■■□□□ 1.85
FOXA1-204ENST00000554607 SLC8B1Q6J4K2 584 aa26.59■■□□□ 1.85
FOXA1-204ENST00000554607 TPRG1Q6ZUI0 275 aa26.59■■□□□ 1.85
FOXA1-204ENST00000554607 SECISBP2LQ93073 1101 aaKnown RBP26.59■■□□□ 1.85
FOXA1-204ENST00000554607 ELSPBP1Q96BH3 223 aa26.59■■□□□ 1.85
FOXA1-204ENST00000554607 ZSCAN32Q9NX65 697 aa26.59■■□□□ 1.85
FOXA1-204ENST00000554607 MED19A0JLT2 244 aaPredicted RBP26.58■■□□□ 1.85
FOXA1-204ENST00000554607 GRM5P41594 1212 aa26.58■■□□□ 1.85
FOXA1-204ENST00000554607 I3L4J1 428 aa26.57■■□□□ 1.84
FOXA1-204ENST00000554607 PRRG1O14668 218 aa26.57■■□□□ 1.84
FOXA1-204ENST00000554607 ZNF197O14709 1029 aa26.57■■□□□ 1.84
FOXA1-204ENST00000554607 ABLIM3O94929 683 aa26.57■■□□□ 1.84
FOXA1-204ENST00000554607 SDHBP21912 280 aa26.57■■□□□ 1.84
FOXA1-204ENST00000554607 CCT6AP40227 531 aaKnown RBP26.57■■□□□ 1.84
FOXA1-204ENST00000554607 BRCC3P46736 316 aa26.57■■□□□ 1.84
FOXA1-204ENST00000554607 ROR1Q01973 937 aa26.57■■□□□ 1.84
FOXA1-204ENST00000554607 SLC5A9Q2M3M2 681 aa26.57■■□□□ 1.84
FOXA1-204ENST00000554607 XKR4Q5GH76 650 aa26.57■■□□□ 1.84
FOXA1-204ENST00000554607 ZBTB44Q8NCP5 570 aa26.57■■□□□ 1.84
FOXA1-204ENST00000554607 C3orf58Q8NDZ4 430 aa26.57■■□□□ 1.84
FOXA1-204ENST00000554607 DNASE1L2Q92874 299 aa26.57■■□□□ 1.84
FOXA1-204ENST00000554607 PLA2G2FQ9BZM2 168 aa26.57■■□□□ 1.84
FOXA1-204ENST00000554607 BHMT2Q9H2M3 363 aa26.57■■□□□ 1.84
FOXA1-204ENST00000554607 GOLGA2P5Q9HBQ8 144 aa26.57■■□□□ 1.84
FOXA1-204ENST00000554607 STK24Q9Y6E0 443 aa26.57■■□□□ 1.84
FOXA1-204ENST00000554607 PHLPP2Q6ZVD8 1323 aa26.57■■□□□ 1.84
FOXA1-204ENST00000554607 H7C4K7 107 aa26.56■■□□□ 1.84
FOXA1-204ENST00000554607 SYN3O14994 580 aa26.56■■□□□ 1.84
FOXA1-204ENST00000554607 MICAL2O94851 1124 aa26.56■■□□□ 1.84
FOXA1-204ENST00000554607 ATF2P15336 505 aa26.56■■□□□ 1.84
FOXA1-204ENST00000554607 TARSP26639 723 aaKnown RBP26.56■■□□□ 1.84
FOXA1-204ENST00000554607 NEK4P51957 841 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms