RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 ZP2Q05996 745 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 PPP2R3AQ06190 1150 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 SPAG1Q07617 926 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 ELAVL2Q12926 359 aaKnown RBP11.63□□□□□ -0.55
SHMT2-213ENST00000554600 KCNC3Q14003 757 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 KIAA0319Q5VV43 1072 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 SYCE2Q6PIF2 218 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 ELMSAN1Q6PJG2 1045 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 DCLRE1AQ6PJP8 1040 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 SHC4Q6S5L8 630 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 PRSS55Q6UWB4 352 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-213ENST00000554600 PALB2Q86YC2 1186 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 MAP4K3Q8IVH8 894 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 CCDC65Q8IXS2 484 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 SYCP3Q8IZU3 236 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 IQUBQ8NA54 791 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 NOC3LQ8WTT2 800 aaKnown RBP11.63□□□□□ -0.55
SHMT2-213ENST00000554600 SLC22A17Q8WUG5 538 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 DNAJC19Q96DA6 116 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 RPGRIP1Q96KN7 1286 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 FBXL18Q96ME1 805 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 TTPALQ9BTX7 342 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 LRRC27Q9C0I9 530 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 HAPLN2Q9GZV7 340 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 RPF1Q9H9Y2 349 aaKnown RBP11.63□□□□□ -0.55
SHMT2-213ENST00000554600 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.63□□□□□ -0.55
SHMT2-213ENST00000554600 SEL1LQ9UBV2 794 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 CDH22Q9UJ99 828 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 PCDHA7Q9UN72 937 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 NUB1Q9Y5A7 615 aa11.63□□□□□ -0.55
SHMT2-213ENST00000554600 TISP43B9A030 160 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 ANKRD63C9JTQ0 380 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 I3L4J1 428 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 PODXLO00592 558 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 POLR2DO15514 142 aaKnown RBP11.62□□□□□ -0.55
SHMT2-213ENST00000554600 TRAPPC3O43617 180 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 LILRB3O75022 631 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 GLUD1P00367 558 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 SPATA31D3P0C874 917 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 KCNE1P15382 129 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 TNFSF9P41273 254 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 BRCC3P46736 316 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 CLCN4P51793 760 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 ASIC1P78348 528 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 KRT85P78386 507 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 AMPD3Q01432 767 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 CREMQ03060 361 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 ITIH3Q06033 890 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 SOX4Q06945 474 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-213ENST00000554600 CBX2Q14781 532 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-213ENST00000554600 PSMD5Q16401 504 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 KYAT1Q16773 422 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 SLC10A6Q3KNW5 377 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 RTP2Q5QGT7 225 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 AXDND1Q5T1B0 1012 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-213ENST00000554600 ADALQ6DHV7 355 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 KANK3Q6NY19 840 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 ALKAL1Q6UXT8 129 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 TMC5Q6UXY8 1006 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 SPATA31D4Q6ZUB0 917 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 ZNF720Q7Z2F6 126 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 RNF168Q8IYW5 571 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-213ENST00000554600 POMGNT1Q8WZA1 660 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 C18orf25Q96B23 403 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-213ENST00000554600 HVCN1Q96D96 273 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 KIF12Q96FN5 646 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 DDX27Q96GQ7 796 aaKnown RBP11.62□□□□□ -0.55
SHMT2-213ENST00000554600 SPATA32Q96LK8 384 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 RIPOR3Q96MK2 946 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 ZMAT2Q96NC0 199 aaKnown RBP11.62□□□□□ -0.55
SHMT2-213ENST00000554600 ACCSQ96QU6 501 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 FIZ1Q96SL8 496 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 PHF7Q9BWX1 381 aaPredicted RBP11.62□□□□□ -0.55
SHMT2-213ENST00000554600 S1PR5Q9H228 398 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 TNMDQ9H2S6 317 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 CUEDC2Q9H467 287 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 MAN1C1Q9NR34 630 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 TSHZ2Q9NRE2 1034 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 CHST7Q9NS84 486 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 CNTN3Q9P232 1028 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 EXOC7Q9UPT5 735 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 PCDHB13Q9Y5F0 798 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 ATP6V1DQ9Y5K8 247 aa11.62□□□□□ -0.55
SHMT2-213ENST00000554600 LACTBL1A8MY62 500 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 PIGRP01833 764 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 MTHFRP42898 656 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 E2F4Q16254 413 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 UPP1Q16831 310 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 XKR4Q5GH76 650 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 ATAT1Q5SQI0 421 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 ZBTB41Q5SVQ8 909 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 RESP18Q5W5W9 173 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 SLFN12LQ6IEE8 588 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 SLC39A4Q6P5W5 647 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 SUSD6Q92537 303 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 CHAMP1Q96JM3 812 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 IKZF4Q9H2S9 585 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 ADAM7Q9H2U9 754 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 ST6GALNAC4Q9H4F1 302 aa11.61□□□□□ -0.55
SHMT2-213ENST00000554600 SFXN1Q9H9B4 322 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms