RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 MVKQ03426 396 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 CYP4F3Q08477 520 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 SLFN5Q08AF3 891 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 GRB10Q13322 594 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 ACVR2BQ13705 512 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 ADGRF1Q5T601 910 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 NSMFQ6X4W1 530 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 ATG14Q6ZNE5 492 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 SPICE1Q8N0Z3 855 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 MAGEB6Q8N7X4 407 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 DDX11Q96FC9 970 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 SNX27Q96L92 541 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 CDC6Q99741 560 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 IER2Q9BTL4 223 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 UPF3AQ9H1J1 476 aaKnown RBP5.81□□□□□ -1.48
ATXN3-228ENST00000554592 ABHD16BQ9H3Z7 469 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 HIPK3Q9H422 1215 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 VCPKMTQ9H867 229 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 MCM9Q9NXL9 1143 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 SWAP70Q9UH65 585 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 ZHX1Q9UKY1 873 aaPredicted RBP5.81□□□□□ -1.48
ATXN3-228ENST00000554592 MRPS23Q9Y3D9 190 aaKnown RBP5.81□□□□□ -1.48
ATXN3-228ENST00000554592 FPGT-TNNI3KV9GXZ4 949 aa5.81□□□□□ -1.48
ATXN3-228ENST00000554592 LAMA2P24043 3122 aaKnown RBP5.8□□□□□ -1.48
ATXN3-228ENST00000554592 CCDC163A0A0D9SF12 145 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 OR14I1A6ND48 311 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 KIF28PB7ZC32 967 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 NFIBO00712 420 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 AURKAO14965 403 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 ZEB2O60315 1214 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 DLX3O60479 287 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 SEMA7AO75326 666 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 CD3EP07766 207 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 PFKMP08237 780 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 CT47B1P0C2W7 299 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-228ENST00000554592 TMEM253P0C7T8 217 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 ALADP13716 330 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 PRKCAP17252 672 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 MRE11P49959 708 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 CCL23P55773 120 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 GFRA1P56159 465 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 DLG4P78352 724 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 AMPD2Q01433 879 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 POU4F1Q01851 419 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 ICA1Q05084 483 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 ITGA7Q13683 1181 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 CBX2Q14781 532 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-228ENST00000554592 TCEA2Q15560 299 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 DPY19L1Q2PZI1 675 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 RCSD1Q6JBY9 416 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 SPOCD1Q6ZMY3 1216 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 FAM9BQ8IZU0 186 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 SYNPOQ8N3V7 929 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 PHOSPHO2Q8TCD6 241 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 ARHGAP45Q92619 1136 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 CCDC17Q96LX7 622 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 PTCHD1Q96NR3 888 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 RIOK1Q9BRS2 568 aaKnown RBP5.8□□□□□ -1.48
ATXN3-228ENST00000554592 TEX13BQ9BXU2 312 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 CRNKL1Q9BZJ0 848 aaKnown RBP5.8□□□□□ -1.48
ATXN3-228ENST00000554592 KCNH6Q9H252 994 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 TNFRSF12AQ9NP84 129 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 CYP26B1Q9NR63 512 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 KLHL14Q9P2G3 628 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 IMPACTQ9P2X3 320 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 MBD1Q9UIS9 605 aaPredicted RBP5.8□□□□□ -1.48
ATXN3-228ENST00000554592 SMG5Q9UPR3 1016 aaKnown RBP5.8□□□□□ -1.48
ATXN3-228ENST00000554592 TAF6LQ9Y6J9 622 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 MAST2Q6P0Q8 1798 aa5.8□□□□□ -1.48
ATXN3-228ENST00000554592 LTBP2Q14767 1821 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 PNMA6EA0A0J9YXQ4 647 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 CTAGE5O15320 804 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 ANP32CO43423 234 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 CA3P07451 260 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 SNRPB2P08579 225 aaKnown RBP5.79□□□□□ -1.48
ATXN3-228ENST00000554592 SUPT20HL2P0C7V6 817 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 ACTN1P12814 892 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 HOXC12P31275 282 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 CYP4F8P98187 520 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 TNFAIP2Q03169 654 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 OS9Q13438 667 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-228ENST00000554592 LAPTM5Q13571 262 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 C21orf62-AS1Q17RA5 79 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 HLA-DQA1Q5Y7H0 255 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 CXCL17Q6UXB2 119 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 CYP2R1Q6VVX0 501 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 NOL8Q76FK4 1167 aaKnown RBP5.79□□□□□ -1.48
ATXN3-228ENST00000554592 REPS2Q8NFH8 660 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 ARNTL2Q8WYA1 636 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 IPO9Q96P70 1041 aaKnown RBP5.79□□□□□ -1.48
ATXN3-228ENST00000554592 SGPP1Q9BX95 441 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 TRPV6Q9H1D0 765 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 CERS4Q9HA82 394 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 FBXO28Q9NVF7 368 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 MYH2Q9UKX2 1941 aa5.79□□□□□ -1.48
ATXN3-228ENST00000554592 UMODL1Q5DID0 1318 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 RLFQ13129 1914 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 NPIPB6E9PJ23 425 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 STXBP3O00186 592 aa5.78□□□□□ -1.48
ATXN3-228ENST00000554592 ATP2A1O14983 1001 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms