RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ZMYND12Q9H0C1 365 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 R3HDMLQ9H3Y0 253 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 MORF4L1Q9UBU8 362 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 TCFL5Q9UL49 500 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 CCPG1Q9ULG6 757 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 RABGAP1Q9Y3P9 1069 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 RIPK3Q9Y572 518 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 CTDP1Q9Y5B0 961 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-212ENST00000554486 TCHHQ07283 1943 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 ABCB11O95342 1321 aa7.18□□□□□ -1.26
SCFD1-212ENST00000554486 RBBP6Q7Z6E9 1792 aaKnown RBP7.18□□□□□ -1.26
SCFD1-212ENST00000554486 MYH7BA7E2Y1 1941 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 LCTP09848 1927 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 ESYT2A0FGR8 921 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 VPS37CA5D8V6 355 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-212ENST00000554486 SMCO2A6NFE2 343 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 H3BQV1 296 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 NFIBO00712 420 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 KCNH1O95259 989 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 MMP1P03956 469 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 FAM153BP0C7A2 387 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 ALAS1P13196 640 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 IFNGR1P15260 489 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 MAP2K2P36507 400 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 STAT3P40763 770 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 GCLCP48506 637 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-212ENST00000554486 ADCY7P51828 1080 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 NLRP5P59047 1200 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 TRAF1Q13077 416 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 GRB10Q13322 594 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 TRIM29Q14134 588 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 PLS1Q14651 629 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 YOD1Q5VVQ6 348 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-212ENST00000554486 SNRNP48Q6IEG0 339 aaKnown RBP7.17□□□□□ -1.26
SCFD1-212ENST00000554486 JAZF1Q86VZ6 243 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 RIOX2Q8IUF8 465 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 ANKRD13CQ8N6S4 541 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 CCDC148Q8NFR7 591 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 TBC1D5Q92609 795 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 PPP1R14AQ96A00 147 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 MRFAP1L1Q96HT8 127 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 G6PC3Q9BUM1 346 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 MOV10L1Q9BXT6 1211 aaKnown RBP7.17□□□□□ -1.26
SCFD1-212ENST00000554486 TEX13BQ9BXU2 312 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 SPATC1LQ9H0A9 340 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 RIC8AQ9NPQ8 531 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 RNF146Q9NTX7 359 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 PNMA2Q9UL42 364 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 SF3B6Q9Y3B4 125 aaKnown RBP7.17□□□□□ -1.26
SCFD1-212ENST00000554486 MRPL11Q9Y3B7 192 aaKnown RBP7.17□□□□□ -1.26
SCFD1-212ENST00000554486 MYH15Q9Y2K3 1946 aa7.17□□□□□ -1.26
SCFD1-212ENST00000554486 BTBD18B2RXH4 712 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 KIF28PB7ZC32 967 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 ARNTLO00327 626 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 MEIS2O14770 477 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 AURKAO14965 403 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 CA12O43570 354 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 TLR2O60603 784 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 ZSCAN22P10073 491 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-212ENST00000554486 XBP1P17861 261 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 U2AF2P26368 475 aaKnown RBP eCLIP7.16□□□□□ -1.262e-22■■■■□ 21.2
SCFD1-212ENST00000554486 CALML3P27482 149 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 GHRHRQ02643 423 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 RESTQ13127 1097 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 CRHR2Q13324 411 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 UBE2SQ16763 222 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 DPY19L1Q2PZI1 675 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 TKFCQ3LXA3 575 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 RALGPS1Q5JS13 557 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 GALNT17Q6IS24 598 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 USP17L6PQ6QN14 398 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 C17orf99Q6UX52 265 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 RNF111Q6ZNA4 994 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 DIS3L2Q8IYB7 885 aaKnown RBP7.16□□□□□ -1.26
SCFD1-212ENST00000554486 BLIDQ8IZY5 108 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 TMEM52Q8NDY8 209 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 GPRC5AQ8NFJ5 357 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 SMCR8Q8TEV9 937 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-212ENST00000554486 CCDC12Q8WUD4 166 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-212ENST00000554486 RNPC3Q96LT9 517 aaKnown RBP7.16□□□□□ -1.26
SCFD1-212ENST00000554486 PORCNQ9H237 461 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 NKX2-4Q9H2Z4 354 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 PSTPIP2Q9H939 334 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 HOMER2Q9NSB8 354 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 FAM53CQ9NYF3 392 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 CHMP5Q9NZZ3 219 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 CPA4Q9UI42 421 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 CTNND2Q9UQB3 1225 aa7.16□□□□□ -1.26
SCFD1-212ENST00000554486 GPR55Q9Y2T6 319 aaPredicted RBP7.16□□□□□ -1.26
SCFD1-212ENST00000554486 PLXNB2O15031 1838 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 MGAMO43451 1857 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 PCNTO95613 3336 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 DNAJC25-GNG10A0A024R161 153 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-212ENST00000554486 FKTNO75072 461 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 SLC25A27O95847 323 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 CFBP00751 764 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 GNA11P29992 359 aa7.15□□□□□ -1.26
SCFD1-212ENST00000554486 HOXA13P31271 388 aaPredicted RBP7.15□□□□□ -1.26
SCFD1-212ENST00000554486 COPB2P35606 906 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms