RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 FBXL21Q9UKT6 434 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 ADAMTS5Q9UNA0 930 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 Q9Y3F1 56 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 RALGAPA2Q2PPJ7 1873 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 RAD50Q92878 1312 aa6.72□□□□□ -1.33
ATXN3-226ENST00000554350 CACNA1FO60840 1977 aa6.71□□□□□ -1.33
ATXN3-226ENST00000554350 MICAL3Q7RTP6 2002 aa6.71□□□□□ -1.33
ATXN3-226ENST00000554350 KINO60870 393 aaKnown RBP6.71□□□□□ -1.34
ATXN3-226ENST00000554350 ZBED4O75132 1171 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 RB1P06400 928 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 ASGR2P07307 311 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 CKBP12277 381 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 AOC1P19801 751 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 GBP1P32455 592 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 BMPR1AP36894 532 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 IL15P40933 162 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-226ENST00000554350 BUD31P41223 144 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-226ENST00000554350 IRX6P78412 446 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-226ENST00000554350 SSPNQ14714 243 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 CWF19L1Q69YN2 538 aaKnown RBP6.71□□□□□ -1.34
ATXN3-226ENST00000554350 OVOS1Q6IE37 1185 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 ZPBP2Q6X784 338 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 TMEM179Q6ZVK1 233 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 ADGRA1Q86SQ6 560 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 SIRT2Q8IXJ6 389 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 MIGA1Q8NAN2 632 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 MAP6Q96JE9 813 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 SLF1Q9BQI6 1058 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 IFIH1Q9BYX4 1025 aaKnown RBP6.71□□□□□ -1.34
ATXN3-226ENST00000554350 RAVER2Q9HCJ3 691 aaKnown RBP6.71□□□□□ -1.34
ATXN3-226ENST00000554350 FBXO40Q9UH90 709 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 TMX2Q9Y320 296 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 RWDD3Q9Y3V2 267 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 NR2E1Q9Y466 385 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 PCDHB14Q9Y5E9 798 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 FOCADQ5VW36 1801 aa6.71□□□□□ -1.34
ATXN3-226ENST00000554350 MAST4O15021 2626 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 ADAMTS20P59510 1910 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 B8ZZF3 427 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 NRDCO43847 1150 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 GLP2RO95838 553 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 MMP1P03956 469 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 ARP10275 920 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 RPL10P27635 214 aaKnown RBP6.7□□□□□ -1.34
ATXN3-226ENST00000554350 PLCD1P51178 756 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 CDCP2Q5VXM1 449 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 REPS2Q8NFH8 660 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 DBF4BQ8NFT6 615 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 MICAL1Q8TDZ2 1067 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 IL17RAQ96F46 866 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 NEK1Q96PY6 1258 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 NUP88Q99567 741 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-226ENST00000554350 KRTAP4-5Q9BYR2 181 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 TLE6Q9H808 572 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 IGSF5Q9NSI5 407 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 GMIPQ9P107 970 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 MBD1Q9UIS9 605 aaPredicted RBP6.7□□□□□ -1.34
ATXN3-226ENST00000554350 PA2G4Q9UQ80 394 aaKnown RBP6.7□□□□□ -1.34
ATXN3-226ENST00000554350 PARP14Q460N5 1801 aa6.7□□□□□ -1.34
ATXN3-226ENST00000554350 MYO10Q9HD67 2058 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 C5orf67F2Z3F1 127 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 PER2O15055 1255 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 VAMP4O75379 141 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 PROS1P07225 676 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 SRGAP2BP0DMP2 458 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 KIR2DL1P43626 348 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-226ENST00000554350 KIR2DL2P43627 348 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-226ENST00000554350 RNF4P78317 190 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 RBM10P98175 930 aaKnown RBP6.69□□□□□ -1.34
ATXN3-226ENST00000554350 SLFN5Q08AF3 891 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 DUSP28Q4G0W2 176 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 SPECC1Q5M775 1068 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 ZNF618Q5T7W0 954 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 TAPT1Q6NXT6 567 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 LRSAM1Q6UWE0 723 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 ZNF655Q8N720 491 aaPredicted RBP6.69□□□□□ -1.34
ATXN3-226ENST00000554350 CHST13Q8NET6 341 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 SUSD6Q92537 303 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 TOP1MTQ969P6 601 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 KCNC2Q96PR1 638 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 PLCD4Q9BRC7 762 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 ANP32EQ9BTT0 268 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 WDR11Q9BZH6 1224 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 CNNM2Q9H8M5 875 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 EHMT1Q9H9B1 1298 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 VTA1Q9NP79 307 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 TCFL5Q9UL49 500 aa6.69□□□□□ -1.34
ATXN3-226ENST00000554350 ISY1Q9ULR0 285 aaKnown RBP6.69□□□□□ -1.34
ATXN3-226ENST00000554350 SCN10AQ9Y5Y9 1956 aa6.68□□□□□ -1.34
ATXN3-226ENST00000554350 OR14I1A6ND48 311 aa6.68□□□□□ -1.34
ATXN3-226ENST00000554350 C2CD4DB7Z1M9 353 aa6.68□□□□□ -1.34
ATXN3-226ENST00000554350 KPNA6O60684 536 aa6.68□□□□□ -1.34
ATXN3-226ENST00000554350 PRAMEF1O95521 474 aa6.68□□□□□ -1.34
ATXN3-226ENST00000554350 SP9P0CG40 484 aa6.68□□□□□ -1.34
ATXN3-226ENST00000554350 EEF2P13639 858 aaKnown RBP6.68□□□□□ -1.34
ATXN3-226ENST00000554350 AKR1B1P15121 316 aa6.68□□□□□ -1.34
ATXN3-226ENST00000554350 EIF4A3P38919 411 aaKnown RBP6.68□□□□□ -1.34
ATXN3-226ENST00000554350 TECP42680 631 aa6.68□□□□□ -1.34
ATXN3-226ENST00000554350 TFCP2Q12800 502 aa6.68□□□□□ -1.34
ATXN3-226ENST00000554350 ADGRF1Q5T601 910 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms