RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 XKR4Q5GH76 650 aa20.57■□□□□ 0.88
CPSF2-203ENST00000554290 CWF19L1Q69YN2 538 aaKnown RBP20.57■□□□□ 0.88
CPSF2-203ENST00000554290 ALKAL1Q6UXT8 129 aa20.57■□□□□ 0.88
CPSF2-203ENST00000554290 ANKS3Q6ZW76 656 aa20.57■□□□□ 0.88
CPSF2-203ENST00000554290 RTL10Q7L3V2 364 aa20.57■□□□□ 0.88
CPSF2-203ENST00000554290 CEP120Q8N960 986 aa20.57■□□□□ 0.88
CPSF2-203ENST00000554290 NTPCRQ9BSD7 190 aaKnown RBP20.57■□□□□ 0.88
CPSF2-203ENST00000554290 ANHXE9PGG2 379 aa20.56■□□□□ 0.88
CPSF2-203ENST00000554290 ADAM12O43184 909 aa20.56■□□□□ 0.88
CPSF2-203ENST00000554290 GFRA3O60609 400 aa20.56■□□□□ 0.88
CPSF2-203ENST00000554290 RFX1P22670 979 aa20.56■□□□□ 0.88
CPSF2-203ENST00000554290 SMTNP53814 917 aa20.56■□□□□ 0.88
CPSF2-203ENST00000554290 STRN3Q13033 797 aa20.56■□□□□ 0.88
CPSF2-203ENST00000554290 MAPK7Q13164 816 aa20.56■□□□□ 0.88
CPSF2-203ENST00000554290 HYIQ5T013 277 aa20.56■□□□□ 0.88
CPSF2-203ENST00000554290 AXDND1Q5T1B0 1012 aaPredicted RBP20.56■□□□□ 0.88
CPSF2-203ENST00000554290 MPZL3Q6UWV2 235 aa20.56■□□□□ 0.88
CPSF2-203ENST00000554290 TAS1R3Q7RTX0 852 aa20.56■□□□□ 0.88
CPSF2-203ENST00000554290 KCNK18Q7Z418 384 aa20.56■□□□□ 0.88
CPSF2-203ENST00000554290 SLC7A14Q8TBB6 771 aa20.56■□□□□ 0.88
CPSF2-203ENST00000554290 CDK5RAP3Q96JB5 506 aa20.56■□□□□ 0.88
CPSF2-203ENST00000554290 TMX3Q96JJ7 454 aa20.56■□□□□ 0.88
CPSF2-203ENST00000554290 ACAP3Q96P50 834 aa20.56■□□□□ 0.88
CPSF2-203ENST00000554290 UPF2Q9HAU5 1272 aaKnown RBP20.56■□□□□ 0.88
CPSF2-203ENST00000554290 GOLGA2P5Q9HBQ8 144 aa20.56■□□□□ 0.88
CPSF2-203ENST00000554290 POLIQ9UNA4 740 aa20.56■□□□□ 0.88
CPSF2-203ENST00000554290 BACE2Q9Y5Z0 518 aa20.56■□□□□ 0.88
CPSF2-203ENST00000554290 MTCL1Q9Y4B5 1905 aaKnown RBP20.55■□□□□ 0.88
CPSF2-203ENST00000554290 SFI1A8K8P3 1242 aa20.55■□□□□ 0.88
CPSF2-203ENST00000554290 SLC16A4O15374 487 aa20.55■□□□□ 0.88
CPSF2-203ENST00000554290 CCL16O15467 120 aa20.55■□□□□ 0.88
CPSF2-203ENST00000554290 PI15O43692 258 aa20.55■□□□□ 0.88
CPSF2-203ENST00000554290 PROZP22891 400 aa20.55■□□□□ 0.88
CPSF2-203ENST00000554290 HTR4Q13639 388 aa20.55■□□□□ 0.88
CPSF2-203ENST00000554290 ARL6IP4Q66PJ3 421 aaKnown RBP20.55■□□□□ 0.88
CPSF2-203ENST00000554290 SPIRE2Q8WWL2 714 aa20.55■□□□□ 0.88
CPSF2-203ENST00000554290 KCND2Q9NZV8 630 aa20.55■□□□□ 0.88
CPSF2-203ENST00000554290 CDH7Q9ULB5 785 aa20.55■□□□□ 0.88
CPSF2-203ENST00000554290 CDY1Q9Y6F8 540 aa20.55■□□□□ 0.88
CPSF2-203ENST00000554290 VWA3AA6NCI4 1184 aa20.54■□□□□ 0.88
CPSF2-203ENST00000554290 PROB1E7EW31 1015 aa20.54■□□□□ 0.88
CPSF2-203ENST00000554290 POU2F2P09086 479 aa20.54■□□□□ 0.88
CPSF2-203ENST00000554290 PLS3P13797 630 aa20.54■□□□□ 0.88
CPSF2-203ENST00000554290 KCNE1P15382 129 aa20.54■□□□□ 0.88
CPSF2-203ENST00000554290 GJB2P29033 226 aa20.54■□□□□ 0.88
CPSF2-203ENST00000554290 TKTP29401 623 aaKnown RBP20.54■□□□□ 0.88
CPSF2-203ENST00000554290 BRCC3P46736 316 aa20.54■□□□□ 0.88
CPSF2-203ENST00000554290 SOX4Q06945 474 aaPredicted RBP20.54■□□□□ 0.88
CPSF2-203ENST00000554290 RAD51AP2Q09MP3 1159 aa20.54■□□□□ 0.88
CPSF2-203ENST00000554290 CD300LGQ6UXG3 332 aa20.54■□□□□ 0.88
CPSF2-203ENST00000554290 SYT2Q8N9I0 419 aaPredicted RBP20.54■□□□□ 0.88
CPSF2-203ENST00000554290 SNX27Q96L92 541 aa20.54■□□□□ 0.88
CPSF2-203ENST00000554290 NUMBLQ9Y6R0 609 aa20.54■□□□□ 0.88
CPSF2-203ENST00000554290 KRBA1A5PL33 1030 aa20.53■□□□□ 0.88
CPSF2-203ENST00000554290 PODXLO00592 558 aa20.53■□□□□ 0.88
CPSF2-203ENST00000554290 TOM1L1O75674 476 aa20.53■□□□□ 0.88
CPSF2-203ENST00000554290 HARSP12081 509 aaKnown RBP20.53■□□□□ 0.88
CPSF2-203ENST00000554290 IGFBP6P24592 240 aaPredicted RBP20.53■□□□□ 0.88
CPSF2-203ENST00000554290 RPL9P32969 192 aaKnown RBP20.53■□□□□ 0.88
CPSF2-203ENST00000554290 NBL1P41271 181 aa20.53■□□□□ 0.88
CPSF2-203ENST00000554290 MCM2P49736 904 aa20.53■□□□□ 0.88
CPSF2-203ENST00000554290 NTHL1P78549 312 aa20.53■□□□□ 0.88
CPSF2-203ENST00000554290 MTSS1LQ765P7 747 aa20.53■□□□□ 0.88
CPSF2-203ENST00000554290 CCDC105Q8IYK2 499 aa20.53■□□□□ 0.88
CPSF2-203ENST00000554290 C3orf58Q8NDZ4 430 aa20.53■□□□□ 0.88
CPSF2-203ENST00000554290 GPR152Q8TDT2 470 aa20.53■□□□□ 0.88
CPSF2-203ENST00000554290 ZMAT2Q96NC0 199 aaKnown RBP20.53■□□□□ 0.88
CPSF2-203ENST00000554290 PNMA5Q96PV4 448 aa20.53■□□□□ 0.88
CPSF2-203ENST00000554290 SLC2A4RGQ9NR83 387 aa20.53■□□□□ 0.88
CPSF2-203ENST00000554290 CNTN3Q9P232 1028 aa20.53■□□□□ 0.88
CPSF2-203ENST00000554290 CA14Q9ULX7 337 aa20.53■□□□□ 0.88
CPSF2-203ENST00000554290 NUB1Q9Y5A7 615 aa20.53■□□□□ 0.88
CPSF2-203ENST00000554290 H0YCG3 227 aa20.52■□□□□ 0.88
CPSF2-203ENST00000554290 I3L4J1 428 aa20.52■□□□□ 0.88
CPSF2-203ENST00000554290 ABLIM1O14639 778 aa20.52■□□□□ 0.88
CPSF2-203ENST00000554290 PLA2G4BP0C869 781 aa20.52■□□□□ 0.88
CPSF2-203ENST00000554290 RSPO2Q6UXX9 243 aaPredicted RBP20.52■□□□□ 0.88
CPSF2-203ENST00000554290 DTWD2Q8NBA8 298 aa20.52■□□□□ 0.88
CPSF2-203ENST00000554290 TMEM161BQ8NDZ6 487 aa20.52■□□□□ 0.88
CPSF2-203ENST00000554290 ZNF461Q8TAF7 563 aa20.52■□□□□ 0.88
CPSF2-203ENST00000554290 FGF13Q92913 245 aa20.52■□□□□ 0.88
CPSF2-203ENST00000554290 PLIN2Q99541 437 aa20.52■□□□□ 0.88
CPSF2-203ENST00000554290 LARSQ9P2J5 1176 aaKnown RBP20.52■□□□□ 0.88
CPSF2-203ENST00000554290 ANKFY1Q9P2R3 1169 aa20.52■□□□□ 0.88
CPSF2-203ENST00000554290 KCNH3Q9ULD8 1083 aa20.52■□□□□ 0.88
CPSF2-203ENST00000554290 CACNA1HO95180 2353 aa20.51■□□□□ 0.87
CPSF2-203ENST00000554290 H7C4K7 107 aa20.51■□□□□ 0.87
CPSF2-203ENST00000554290 SYN3O14994 580 aa20.51■□□□□ 0.87
CPSF2-203ENST00000554290 CLDN3O15551 220 aa20.51■□□□□ 0.87
CPSF2-203ENST00000554290 SLC26A4O43511 780 aa20.51■□□□□ 0.87
CPSF2-203ENST00000554290 ELF1P32519 619 aa20.51■□□□□ 0.87
CPSF2-203ENST00000554290 SLC12A3P55017 1021 aa20.51■□□□□ 0.87
CPSF2-203ENST00000554290 NOLC1Q14978 699 aaKnown RBP eCLIP20.51■□□□□ 0.87
CPSF2-203ENST00000554290 PABPC1LQ4VXU2 614 aaKnown RBP20.51■□□□□ 0.87
CPSF2-203ENST00000554290 PHLDB3Q6NSJ2 640 aa20.51■□□□□ 0.87
CPSF2-203ENST00000554290 PARM1Q6UWI2 310 aa20.51■□□□□ 0.87
CPSF2-203ENST00000554290 ZPBP2Q6X784 338 aa20.51■□□□□ 0.87
CPSF2-203ENST00000554290 ZBTB45Q96K62 511 aaPredicted RBP20.51■□□□□ 0.87
CPSF2-203ENST00000554290 AK8Q96MA6 479 aa20.51■□□□□ 0.87
CPSF2-203ENST00000554290 TBC1D17Q9HA65 648 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms