RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 ANKDD1AQ495B1 522 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 COBLL1Q53SF7 1204 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 FAM83BQ5T0W9 1011 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 TMEM63BQ5T3F8 832 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 VASH1Q7L8A9 365 aaPredicted RBP10.12□□□□□ -0.79
SIX4-202ENST00000554079 ZNF410Q86VK4 478 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 LRRC6Q86X45 466 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 ERI1Q8IV48 349 aaKnown RBP10.12□□□□□ -0.79
SIX4-202ENST00000554079 SCYL3Q8IZE3 742 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 VPS52Q8N1B4 723 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 SRBD1Q8N5C6 995 aaKnown RBP10.12□□□□□ -0.79
SIX4-202ENST00000554079 CXorf38Q8TB03 319 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 LRRC15Q8TF66 581 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 ART4Q93070 314 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 BIRC8Q96P09 236 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.12□□□□□ -0.79
SIX4-202ENST00000554079 MAK16Q9BXY0 300 aaKnown RBP10.12□□□□□ -0.79
SIX4-202ENST00000554079 GRIP2Q9C0E4 1043 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 LRRC27Q9C0I9 530 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 ARHGEF4Q9NR80 690 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 ADAMTS1Q9UHI8 967 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 NENFQ9UMX5 172 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 SNX9Q9Y5X1 595 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 CEPT1Q9Y6K0 416 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 SLC4A4Q9Y6R1 1079 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 PRR36Q9H6K5 1346 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 ATRNO75882 1429 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 LTBP4Q8N2S1 1624 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 NRXN3Q9Y4C0 1643 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 A0A1W2PQ67 120 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 SOBPA7XYQ1 873 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 ANKRD63C9JTQ0 380 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 RARBP10826 455 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 CETPP11597 493 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 STK4Q13043 487 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 APOFQ13790 326 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 NONOQ15233 471 aaKnown RBP eCLIP10.12□□□□□ -0.79
SIX4-202ENST00000554079 PDK4Q16654 411 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 PLEKHG4Q58EX7 1191 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 SPOPLQ6IQ16 392 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 DCDC5Q6ZRR9 648 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 RIPOR1Q6ZS17 1223 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 C11orf74Q86VG3 221 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 LRRC49Q8IUZ0 686 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 CMTR1Q8N1G2 835 aaKnown RBP10.12□□□□□ -0.79
SIX4-202ENST00000554079 SLC43A3Q8NBI5 491 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 PPP1R14CQ8TAE6 165 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 DENND1AQ8TEH3 1009 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 PPP4R1Q8TF05 950 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 FAM172AQ8WUF8 416 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 TTC1Q99614 292 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 UBN1Q9NPG3 1134 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 AAASQ9NRG9 546 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 UVRAGQ9P2Y5 699 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 GRID1Q9ULK0 1009 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 CLEC11AQ9Y240 323 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 ZMYM2Q9UBW7 1377 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 HEG1Q9ULI3 1381 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 DCCP43146 1447 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 PLCH1Q4KWH8 1693 aa10.12□□□□□ -0.79
SIX4-202ENST00000554079 TJP1Q07157 1748 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 IQCA1LA6NCM1 817 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 FAM47DPA6NHR8 397 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 ADCY6O43306 1168 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 XPOTO43592 962 aaKnown RBP10.11□□□□□ -0.79
SIX4-202ENST00000554079 TFPTP0C1Z6 253 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 CDH2P19022 906 aaPredicted RBP10.11□□□□□ -0.79
SIX4-202ENST00000554079 GNA11P29992 359 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 LONP1P36776 959 aaKnown RBP10.11□□□□□ -0.79
SIX4-202ENST00000554079 PGM1P36871 562 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 PPP1R2P41236 205 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 PHKA2P46019 1235 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 STT3AP46977 705 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 EIF2B2P49770 351 aaKnown RBP10.11□□□□□ -0.79
SIX4-202ENST00000554079 ACTR3P61158 418 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 CYTH1Q15438 398 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 TRMT5Q32P41 509 aaKnown RBP10.11□□□□□ -0.79
SIX4-202ENST00000554079 USP41Q3LFD5 358 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 CENPPQ6IPU0 288 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 RNF111Q6ZNA4 994 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 RFX8Q6ZV50 586 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 OTOAQ7RTW8 1153 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 ATG9AQ7Z3C6 839 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 NLRX1Q86UT6 975 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 MARVELD2Q8N4S9 558 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 PRR11Q96HE9 360 aaPredicted RBP10.11□□□□□ -0.79
SIX4-202ENST00000554079 ANKRD36BP1Q96IX9 119 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 MAELQ96JY0 434 aaKnown RBP10.11□□□□□ -0.79
SIX4-202ENST00000554079 FAM161BQ96MY7 647 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 CYTH2Q99418 400 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 OSBPL6Q9BZF3 934 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 SLC38A7Q9NVC3 462 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 HEMK1Q9Y5R4 338 aaPredicted RBP10.11□□□□□ -0.79
SIX4-202ENST00000554079 RREB1Q92766 1687 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 A0A0A6YYK5 440 aaPredicted RBP10.11□□□□□ -0.79
SIX4-202ENST00000554079 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.11□□□□□ -0.79
SIX4-202ENST00000554079 ATMINO43313 823 aaPredicted RBP10.11□□□□□ -0.79
SIX4-202ENST00000554079 CNOT3O75175 753 aaKnown RBP10.11□□□□□ -0.79
SIX4-202ENST00000554079 ACSL3O95573 720 aa10.11□□□□□ -0.79
SIX4-202ENST00000554079 BAG2O95816 211 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms