RNA–Protein interactions for RNA: ENST00000554005.1

FOXN3-206, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 450 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-206ENST00000554005 SH3BP1Q9Y3L3 701 aa6.56□□□□□ -1.36
FOXN3-206ENST00000554005 NT5C1B-RDH14C9J2C7 533 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 PJA2O43164 708 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 ZBED1O96006 694 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 HRGP04196 525 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 TYRP14679 529 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 RHCEP18577 417 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 ATP5JP18859 108 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 MSX2P35548 267 aaPredicted RBP6.55□□□□□ -1.36
FOXN3-206ENST00000554005 RAB1AP62820 205 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 NKX6-1P78426 367 aaPredicted RBP6.55□□□□□ -1.36
FOXN3-206ENST00000554005 RHDQ02161 417 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 PTH1RQ03431 593 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 FOXL1Q12952 345 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 MAP9Q49MG5 647 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 MFSD5Q6N075 450 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 KSR2Q6VAB6 950 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 SEM1Q6ZVN7 128 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 DOK3Q7L591 496 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 DAAM2Q86T65 1068 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 XYLT1Q86Y38 959 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 FAM167AQ96KS9 214 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 MRI1Q9BV20 369 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 SARGQ9BW04 601 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 C11orf54Q9H0W9 315 aaPredicted RBP6.55□□□□□ -1.36
FOXN3-206ENST00000554005 DDX21Q9NR30 783 aaKnown RBP eCLIP6.55□□□□□ -1.36
FOXN3-206ENST00000554005 MAN1C1Q9NR34 630 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 ABCF2Q9UG63 623 aa6.55□□□□□ -1.36
FOXN3-206ENST00000554005 ABCA5Q8WWZ7 1642 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 A0A088AWK7 358 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 MYL1P05976 194 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 CD1AP06126 327 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 INHBBP09529 407 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 SNRPA1P09661 255 aaKnown RBP6.54□□□□□ -1.36
FOXN3-206ENST00000554005 TRIM27P14373 513 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 PURAQ00577 322 aaKnown RBP6.54□□□□□ -1.36
FOXN3-206ENST00000554005 PLS1Q14651 629 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 DACT2Q5SW24 774 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 SWSAP1Q6NVH7 229 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 GLB1LQ6UWU2 654 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 SPOCD1Q6ZMY3 1216 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 GPRIN1Q7Z2K8 1008 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 APBB1IPQ7Z5R6 666 aaPredicted RBP6.54□□□□□ -1.36
FOXN3-206ENST00000554005 COL23A1Q86Y22 540 aaPredicted RBP6.54□□□□□ -1.36
FOXN3-206ENST00000554005 FAM43AQ8N2R8 423 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 FAM156AQ8NDB6 213 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 TTC17Q96AE7 1141 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 SLC35A4Q96G79 324 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 MPHOSPH9Q99550 1183 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 KRTAP4-8Q9BYQ9 185 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 CPEB1Q9BZB8 566 aaKnown RBP6.54□□□□□ -1.36
FOXN3-206ENST00000554005 ARMT1Q9H993 441 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 SLC52A1Q9NWF4 448 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 FEZ2Q9UHY8 353 aaPredicted RBP6.54□□□□□ -1.36
FOXN3-206ENST00000554005 L1RE1Q9UN81 338 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 PBRM1Q86U86 1689 aa6.54□□□□□ -1.36
FOXN3-206ENST00000554005 PNPLA7Q6ZV29 1317 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 A0A0G2JLL6 359 aaPredicted RBP6.53□□□□□ -1.36
FOXN3-206ENST00000554005 CAPN8A6NHC0 703 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 TBKBP1A7MCY6 615 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 H3BUI4 141 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 F2RL2O00254 374 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 GRM6O15303 877 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 SBK3P0C264 359 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 FTH1P19P0C7X4 201 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 GNAT2P19087 354 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 SMARCA1P28370 1054 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 CLRN1P58418 232 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 ELAVL1Q15717 326 aaKnown RBP6.53□□□□□ -1.36
FOXN3-206ENST00000554005 CSRP2Q16527 193 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 BMT2Q1RMZ1 405 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 FLYWCH1Q4VC44 716 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 CCDC149Q6ZUS6 474 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 POLNQ7Z5Q5 900 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 CCAR1Q8IX12 1150 aaKnown RBP6.53□□□□□ -1.36
FOXN3-206ENST00000554005 ELOA2Q8IYF1 753 aaPredicted RBP6.53□□□□□ -1.36
FOXN3-206ENST00000554005 D2HGDHQ8N465 521 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 SH2D3CQ8N5H7 860 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 MTFMTQ96DP5 389 aaKnown RBP6.53□□□□□ -1.36
FOXN3-206ENST00000554005 NT5C1BQ96P26 610 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 CPPED1Q9BRF8 314 aaPredicted RBP6.53□□□□□ -1.36
FOXN3-206ENST00000554005 WDCPQ9H6R7 721 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 PNPOQ9NVS9 261 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 RTEL1Q9NZ71 1219 aa6.53□□□□□ -1.36
FOXN3-206ENST00000554005 SOGA1O94964 1423 aa6.52□□□□□ -1.37
FOXN3-206ENST00000554005 PATE3B3GLJ2 98 aa6.52□□□□□ -1.37
FOXN3-206ENST00000554005 MAP4K4O95819 1239 aaPredicted RBP6.52□□□□□ -1.37
FOXN3-206ENST00000554005 HOXA5P20719 270 aa6.52□□□□□ -1.37
FOXN3-206ENST00000554005 PRDX5P30044 214 aa6.52□□□□□ -1.37
FOXN3-206ENST00000554005 RAP2BP61225 183 aa6.52□□□□□ -1.37
FOXN3-206ENST00000554005 CREMQ03060 361 aa6.52□□□□□ -1.37
FOXN3-206ENST00000554005 ATP2B3Q16720 1220 aa6.52□□□□□ -1.37
FOXN3-206ENST00000554005 PABPC1LQ4VXU2 614 aaKnown RBP6.52□□□□□ -1.37
FOXN3-206ENST00000554005 ZNF529Q6P280 563 aa6.52□□□□□ -1.37
FOXN3-206ENST00000554005 FAM83AQ86UY5 434 aa6.52□□□□□ -1.37
FOXN3-206ENST00000554005 FAM90A1Q86YD7 464 aa6.52□□□□□ -1.37
FOXN3-206ENST00000554005 KRTAP19-1Q8IUB9 90 aa6.52□□□□□ -1.37
FOXN3-206ENST00000554005 MDGA1Q8NFP4 955 aa6.52□□□□□ -1.37
FOXN3-206ENST00000554005 ST8SIA2Q92186 375 aa6.52□□□□□ -1.37
FOXN3-206ENST00000554005 RBM15Q96T37 977 aaKnown RBP eCLIP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms