RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 HERC2P3Q9BVR0 1158 aa25.34■■□□□ 1.65
NEK9-203ENST00000553945 CPSF3Q9UKF6 684 aaKnown RBP25.34■■□□□ 1.65
NEK9-203ENST00000553945 PDCD11Q14690 1871 aaKnown RBP25.34■■□□□ 1.65
NEK9-203ENST00000553945 TTC26A0AVF1 554 aa25.33■■□□□ 1.65
NEK9-203ENST00000553945 LACTBL1A8MY62 500 aa25.33■■□□□ 1.65
NEK9-203ENST00000553945 EIF3DO15371 548 aaKnown RBP eCLIP25.33■■□□□ 1.65
NEK9-203ENST00000553945 KLRC4O43908 158 aa25.33■■□□□ 1.65
NEK9-203ENST00000553945 SOD2P04179 222 aa25.33■■□□□ 1.65
NEK9-203ENST00000553945 MYL1P05976 194 aa25.33■■□□□ 1.65
NEK9-203ENST00000553945 CLCNKBP51801 687 aa25.33■■□□□ 1.65
NEK9-203ENST00000553945 SOX4Q06945 474 aaPredicted RBP25.33■■□□□ 1.65
NEK9-203ENST00000553945 ADAM15Q13444 863 aa25.33■■□□□ 1.65
NEK9-203ENST00000553945 AAK1Q2M2I8 961 aa25.33■■□□□ 1.65
NEK9-203ENST00000553945 CTC1Q2NKJ3 1217 aa25.33■■□□□ 1.65
NEK9-203ENST00000553945 FUT10Q6P4F1 479 aa25.33■■□□□ 1.65
NEK9-203ENST00000553945 EFHBQ8N7U6 833 aa25.33■■□□□ 1.65
NEK9-203ENST00000553945 CDCA3Q99618 268 aaPredicted RBP25.33■■□□□ 1.65
NEK9-203ENST00000553945 GPR62Q9BZJ7 368 aa25.33■■□□□ 1.65
NEK9-203ENST00000553945 SLC39A2Q9NP94 309 aa25.33■■□□□ 1.65
NEK9-203ENST00000553945 EXOC1Q9NV70 894 aa25.33■■□□□ 1.65
NEK9-203ENST00000553945 C2CD2LO14523 706 aa25.32■■□□□ 1.64
NEK9-203ENST00000553945 EFEMP2O95967 443 aa25.32■■□□□ 1.64
NEK9-203ENST00000553945 URODP06132 367 aa25.32■■□□□ 1.64
NEK9-203ENST00000553945 PRR29P0C7W0 189 aa25.32■■□□□ 1.64
NEK9-203ENST00000553945 PTPN14Q15678 1187 aa25.32■■□□□ 1.64
NEK9-203ENST00000553945 KMT5BQ4FZB7 885 aa25.32■■□□□ 1.64
NEK9-203ENST00000553945 FMR1NBQ8N0W7 255 aaPredicted RBP25.32■■□□□ 1.64
NEK9-203ENST00000553945 ZNF507Q8TCN5 953 aa25.32■■□□□ 1.64
NEK9-203ENST00000553945 KIF12Q96FN5 646 aa25.32■■□□□ 1.64
NEK9-203ENST00000553945 ASB2Q96Q27 587 aa25.32■■□□□ 1.64
NEK9-203ENST00000553945 MRPL17Q9NRX2 175 aaKnown RBP25.32■■□□□ 1.64
NEK9-203ENST00000553945 SF3B1O75533 1304 aaKnown RBP eCLIP25.32■■□□□ 1.64
NEK9-203ENST00000553945 H3BQ06 376 aaPredicted RBP25.31■■□□□ 1.64
NEK9-203ENST00000553945 GARTP22102 1010 aa25.31■■□□□ 1.64
NEK9-203ENST00000553945 HOXD13P35453 343 aa25.31■■□□□ 1.64
NEK9-203ENST00000553945 GLUD2P49448 558 aa25.31■■□□□ 1.64
NEK9-203ENST00000553945 NDUFV1P49821 464 aa25.31■■□□□ 1.64
NEK9-203ENST00000553945 UPP1Q16831 310 aa25.31■■□□□ 1.64
NEK9-203ENST00000553945 KIAA1841Q6NSI8 718 aa25.31■■□□□ 1.64
NEK9-203ENST00000553945 DCLRE1AQ6PJP8 1040 aa25.31■■□□□ 1.64
NEK9-203ENST00000553945 NELFCDQ8IXH7 590 aa25.31■■□□□ 1.64
NEK9-203ENST00000553945 RNF168Q8IYW5 571 aaPredicted RBP25.31■■□□□ 1.64
NEK9-203ENST00000553945 SCFD1Q8WVM8 642 aa25.31■■□□□ 1.64
NEK9-203ENST00000553945 DDX27Q96GQ7 796 aaKnown RBP25.31■■□□□ 1.64
NEK9-203ENST00000553945 FAM213AQ9BRX8 229 aa25.31■■□□□ 1.64
NEK9-203ENST00000553945 PCIF1Q9H4Z3 704 aa25.31■■□□□ 1.64
NEK9-203ENST00000553945 TUBGCP4Q9UGJ1 667 aa25.31■■□□□ 1.64
NEK9-203ENST00000553945 IRAK3Q9Y616 596 aa25.31■■□□□ 1.64
NEK9-203ENST00000553945 FSD2A1L4K1 749 aa25.3■■□□□ 1.64
NEK9-203ENST00000553945 B3GAT3O94766 335 aa25.3■■□□□ 1.64
NEK9-203ENST00000553945 RPN1P04843 607 aaKnown RBP25.3■■□□□ 1.64
NEK9-203ENST00000553945 IGFBP6P24592 240 aaPredicted RBP25.3■■□□□ 1.64
NEK9-203ENST00000553945 LTBRP36941 435 aa25.3■■□□□ 1.64
NEK9-203ENST00000553945 RBM10P98175 930 aaKnown RBP25.3■■□□□ 1.64
NEK9-203ENST00000553945 DLX2Q07687 328 aaPredicted RBP25.3■■□□□ 1.64
NEK9-203ENST00000553945 USP41Q3LFD5 358 aa25.3■■□□□ 1.64
NEK9-203ENST00000553945 KANK3Q6NY19 840 aa25.3■■□□□ 1.64
NEK9-203ENST00000553945 ARMCX5Q6P1M9 558 aa25.3■■□□□ 1.64
NEK9-203ENST00000553945 NOC3LQ8WTT2 800 aaKnown RBP25.3■■□□□ 1.64
NEK9-203ENST00000553945 CCDC47Q96A33 483 aaKnown RBP25.3■■□□□ 1.64
NEK9-203ENST00000553945 SAAL1Q96ER3 474 aa25.3■■□□□ 1.64
NEK9-203ENST00000553945 CCDC34Q96HJ3 373 aa25.3■■□□□ 1.64
NEK9-203ENST00000553945 B3GALT6Q96L58 329 aa25.3■■□□□ 1.64
NEK9-203ENST00000553945 CBWD1Q9BRT8 395 aa25.3■■□□□ 1.64
NEK9-203ENST00000553945 UBE4BO95155 1302 aa25.3■■□□□ 1.64
NEK9-203ENST00000553945 TULP1O00294 542 aaPredicted RBP25.29■■□□□ 1.64
NEK9-203ENST00000553945 PODXLO00592 558 aa25.29■■□□□ 1.64
NEK9-203ENST00000553945 CLASP2O75122 1294 aaKnown RBP25.29■■□□□ 1.64
NEK9-203ENST00000553945 TBX10O75333 385 aa25.29■■□□□ 1.64
NEK9-203ENST00000553945 GLP2RO95838 553 aa25.29■■□□□ 1.64
NEK9-203ENST00000553945 KCNQ1P51787 676 aa25.29■■□□□ 1.64
NEK9-203ENST00000553945 FAM160A1Q05DH4 1040 aa25.29■■□□□ 1.64
NEK9-203ENST00000553945 PSMD2Q13200 908 aa25.29■■□□□ 1.64
NEK9-203ENST00000553945 LLGL2Q6P1M3 1020 aa25.29■■□□□ 1.64
NEK9-203ENST00000553945 CRELD2Q6UXH1 353 aaPredicted RBP25.29■■□□□ 1.64
NEK9-203ENST00000553945 CD302Q8IX05 232 aa25.29■■□□□ 1.64
NEK9-203ENST00000553945 ZSWIM2Q8NEG5 633 aa25.29■■□□□ 1.64
NEK9-203ENST00000553945 EMILIN2Q9BXX0 1053 aa25.29■■□□□ 1.64
NEK9-203ENST00000553945 SSX2IPQ9Y2D8 614 aa25.29■■□□□ 1.64
NEK9-203ENST00000553945 GOLGA8IPA6NC78 632 aa25.28■■□□□ 1.64
NEK9-203ENST00000553945 GOLGA8JA6NMD2 632 aa25.28■■□□□ 1.64
NEK9-203ENST00000553945 TMEM189-UBE2V1I3L0A0 370 aa25.28■■□□□ 1.64
NEK9-203ENST00000553945 ADRB2P07550 413 aa25.28■■□□□ 1.64
NEK9-203ENST00000553945 RPL9P32969 192 aaKnown RBP25.28■■□□□ 1.64
NEK9-203ENST00000553945 DPYDQ12882 1025 aa25.28■■□□□ 1.64
NEK9-203ENST00000553945 STK4Q13043 487 aa25.28■■□□□ 1.64
NEK9-203ENST00000553945 CLUL1Q15846 466 aa25.28■■□□□ 1.64
NEK9-203ENST00000553945 LEXMQ3ZCV2 418 aa25.28■■□□□ 1.64
NEK9-203ENST00000553945 TJAP1Q5JTD0 557 aa25.28■■□□□ 1.64
NEK9-203ENST00000553945 FAM171A1Q5VUB5 890 aa25.28■■□□□ 1.64
NEK9-203ENST00000553945 KIAA0319Q5VV43 1072 aa25.28■■□□□ 1.64
NEK9-203ENST00000553945 JADE1Q6IE81 842 aa25.28■■□□□ 1.64
NEK9-203ENST00000553945 C3orf58Q8NDZ4 430 aa25.28■■□□□ 1.64
NEK9-203ENST00000553945 ENGASEQ8NFI3 743 aa25.28■■□□□ 1.64
NEK9-203ENST00000553945 VN1R2Q8NFZ6 395 aa25.28■■□□□ 1.64
NEK9-203ENST00000553945 CHST7Q9NS84 486 aa25.28■■□□□ 1.64
NEK9-203ENST00000553945 BARX2Q9UMQ3 279 aaPredicted RBP25.28■■□□□ 1.64
NEK9-203ENST00000553945 UBQLN1Q9UMX0 589 aaKnown RBP25.28■■□□□ 1.64
NEK9-203ENST00000553945 ANK1P16157 1881 aa25.28■■□□□ 1.64
NEK9-203ENST00000553945 XPOTO43592 962 aaKnown RBP25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms