RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 FAM13BQ9NYF5 915 aa25.75■■□□□ 1.71
TDP1-205ENST00000553527 PRKAG3Q9UGI9 489 aa25.75■■□□□ 1.71
TDP1-205ENST00000553527 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.74■■□□□ 1.71
TDP1-205ENST00000553527 TEX28O15482 410 aa25.74■■□□□ 1.71
TDP1-205ENST00000553527 POLR2DO15514 142 aaKnown RBP25.74■■□□□ 1.71
TDP1-205ENST00000553527 MEFVO15553 781 aaPredicted RBP25.74■■□□□ 1.71
TDP1-205ENST00000553527 CXCL8P10145 99 aa25.74■■□□□ 1.71
TDP1-205ENST00000553527 HOXB8P17481 243 aaPredicted RBP25.74■■□□□ 1.71
TDP1-205ENST00000553527 GAP43P17677 238 aa25.74■■□□□ 1.71
TDP1-205ENST00000553527 RPL17P18621 184 aaKnown RBP25.74■■□□□ 1.71
TDP1-205ENST00000553527 SCP2P22307 547 aa25.74■■□□□ 1.71
TDP1-205ENST00000553527 TPRNQ4KMQ1 711 aa25.74■■□□□ 1.71
TDP1-205ENST00000553527 XKR4Q5GH76 650 aa25.74■■□□□ 1.71
TDP1-205ENST00000553527 RARS2Q5T160 578 aaKnown RBP25.74■■□□□ 1.71
TDP1-205ENST00000553527 ADALQ6DHV7 355 aa25.74■■□□□ 1.71
TDP1-205ENST00000553527 DCLRE1AQ6PJP8 1040 aa25.74■■□□□ 1.71
TDP1-205ENST00000553527 PRSS55Q6UWB4 352 aaPredicted RBP25.74■■□□□ 1.71
TDP1-205ENST00000553527 PALB2Q86YC2 1186 aa25.74■■□□□ 1.71
TDP1-205ENST00000553527 IQUBQ8NA54 791 aa25.74■■□□□ 1.71
TDP1-205ENST00000553527 FAM212AQ96EL1 285 aa25.74■■□□□ 1.71
TDP1-205ENST00000553527 MSTO1Q9BUK6 570 aa25.74■■□□□ 1.71
TDP1-205ENST00000553527 SLC38A7Q9NVC3 462 aa25.74■■□□□ 1.71
TDP1-205ENST00000553527 VWA8A3KMH1 1905 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 TISP43B9A030 160 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 ANKRD63C9JTQ0 380 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 TULP1O00294 542 aaPredicted RBP25.73■■□□□ 1.71
TDP1-205ENST00000553527 GCNT3O95395 438 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 ADH1AP07327 375 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 CLTAP09496 248 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 WEE2P0C1S8 567 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 ABCD1P33897 745 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 CLCN4P51793 760 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 E2F4Q16254 413 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 UPP1Q16831 310 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 ZBTB41Q5SVQ8 909 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 RESP18Q5W5W9 173 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 CES5AQ6NT32 575 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 SLC39A4Q6P5W5 647 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 MAP4K3Q8IVH8 894 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 KHSRPQ92945 711 aaKnown RBP eCLIP25.73■■□□□ 1.71
TDP1-205ENST00000553527 KCNN1Q92952 543 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 CNTN3Q9P232 1028 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 SEL1LQ9UBV2 794 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 BDP1A6H8Y1 2624 aa25.73■■□□□ 1.71
TDP1-205ENST00000553527 PIGRP01833 764 aa25.72■■□□□ 1.71
TDP1-205ENST00000553527 SPATA31D3P0C874 917 aa25.72■■□□□ 1.71
TDP1-205ENST00000553527 KCNE1P15382 129 aa25.72■■□□□ 1.71
TDP1-205ENST00000553527 RTP2Q5QGT7 225 aa25.72■■□□□ 1.71
TDP1-205ENST00000553527 SPATA31D4Q6ZUB0 917 aa25.72■■□□□ 1.71
TDP1-205ENST00000553527 RPGRIP1Q96KN7 1286 aa25.72■■□□□ 1.71
TDP1-205ENST00000553527 FBXL18Q96ME1 805 aa25.72■■□□□ 1.71
TDP1-205ENST00000553527 UROC1Q96N76 676 aa25.72■■□□□ 1.71
TDP1-205ENST00000553527 TTPALQ9BTX7 342 aa25.72■■□□□ 1.71
TDP1-205ENST00000553527 ST6GALNAC4Q9H4F1 302 aa25.72■■□□□ 1.71
TDP1-205ENST00000553527 MTCL1Q9Y4B5 1905 aaKnown RBP25.71■■□□□ 1.71
TDP1-205ENST00000553527 A0A0B4J269 797 aa25.71■■□□□ 1.71
TDP1-205ENST00000553527 GOLGA6L4A6NEF3 574 aa25.71■■□□□ 1.71
TDP1-205ENST00000553527 I3L4J1 428 aa25.71■■□□□ 1.71
TDP1-205ENST00000553527 OGTO15294 1046 aa25.71■■□□□ 1.71
TDP1-205ENST00000553527 SP100P23497 879 aaPredicted RBP25.71■■□□□ 1.71
TDP1-205ENST00000553527 BRCC3P46736 316 aa25.71■■□□□ 1.71
TDP1-205ENST00000553527 KCNA1Q09470 495 aa25.71■■□□□ 1.71
TDP1-205ENST00000553527 CBX2Q14781 532 aaPredicted RBP25.71■■□□□ 1.71
TDP1-205ENST00000553527 TMC5Q6UXY8 1006 aa25.71■■□□□ 1.71
TDP1-205ENST00000553527 CCDC65Q8IXS2 484 aa25.71■■□□□ 1.71
TDP1-205ENST00000553527 TMEM130Q8N3G9 435 aa25.71■■□□□ 1.71
TDP1-205ENST00000553527 C3orf58Q8NDZ4 430 aa25.71■■□□□ 1.71
TDP1-205ENST00000553527 SUSD6Q92537 303 aa25.71■■□□□ 1.71
TDP1-205ENST00000553527 POP1Q99575 1024 aaKnown RBP25.71■■□□□ 1.71
TDP1-205ENST00000553527 LRRC27Q9C0I9 530 aa25.71■■□□□ 1.71
TDP1-205ENST00000553527 TNMDQ9H2S6 317 aa25.71■■□□□ 1.71
TDP1-205ENST00000553527 ADAM7Q9H2U9 754 aa25.71■■□□□ 1.71
TDP1-205ENST00000553527 RPF1Q9H9Y2 349 aaKnown RBP25.71■■□□□ 1.71
TDP1-205ENST00000553527 RXFP1Q9HBX9 757 aa25.71■■□□□ 1.71
TDP1-205ENST00000553527 DZANK1Q9NVP4 752 aa25.71■■□□□ 1.71
TDP1-205ENST00000553527 A0A1W2PQ27 194 aa25.7■■□□□ 1.7
TDP1-205ENST00000553527 A0A1W2PQ64 194 aa25.7■■□□□ 1.7
TDP1-205ENST00000553527 A0A1W2PQD8 194 aa25.7■■□□□ 1.7
TDP1-205ENST00000553527 LACTBL1A8MY62 500 aa25.7■■□□□ 1.7
TDP1-205ENST00000553527 PODXLO00592 558 aa25.7■■□□□ 1.7
TDP1-205ENST00000553527 CMA1P23946 247 aa25.7■■□□□ 1.7
TDP1-205ENST00000553527 ACOT2P49753 483 aa25.7■■□□□ 1.7
TDP1-205ENST00000553527 CASP5P51878 434 aa25.7■■□□□ 1.7
TDP1-205ENST00000553527 AMPD3Q01432 767 aa25.7■■□□□ 1.7
TDP1-205ENST00000553527 PPP2R3AQ06190 1150 aa25.7■■□□□ 1.7
TDP1-205ENST00000553527 HPS3Q969F9 1004 aa25.7■■□□□ 1.7
TDP1-205ENST00000553527 KIF12Q96FN5 646 aa25.7■■□□□ 1.7
TDP1-205ENST00000553527 DDX27Q96GQ7 796 aaKnown RBP25.7■■□□□ 1.7
TDP1-205ENST00000553527 GBP4Q96PP9 640 aa25.7■■□□□ 1.7
TDP1-205ENST00000553527 CUEDC2Q9H467 287 aa25.7■■□□□ 1.7
TDP1-205ENST00000553527 EPHX3Q9H6B9 360 aa25.7■■□□□ 1.7
TDP1-205ENST00000553527 KBTBD4Q9NVX7 518 aa25.7■■□□□ 1.7
TDP1-205ENST00000553527 ITIH3Q06033 890 aa25.69■■□□□ 1.7
TDP1-205ENST00000553527 ELAVL2Q12926 359 aaKnown RBP25.69■■□□□ 1.7
TDP1-205ENST00000553527 KYAT1Q16773 422 aa25.69■■□□□ 1.7
TDP1-205ENST00000553527 CD300LGQ6UXG3 332 aa25.69■■□□□ 1.7
TDP1-205ENST00000553527 SYCP3Q8IZU3 236 aa25.69■■□□□ 1.7
TDP1-205ENST00000553527 FEZF2Q8TBJ5 459 aa25.69■■□□□ 1.7
TDP1-205ENST00000553527 POMGNT1Q8WZA1 660 aa25.69■■□□□ 1.7
TDP1-205ENST00000553527 ACCSQ96QU6 501 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms