RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 C18orf25Q96B23 403 aaPredicted RBP16.12■□□□□ 0.17
MTHFD1-204ENST00000553405 TSPAN18Q96SJ8 248 aa16.12■□□□□ 0.17
MTHFD1-204ENST00000553405 PAAF1Q9BRP4 392 aa16.12■□□□□ 0.17
MTHFD1-204ENST00000553405 MKNK1Q9BUB5 465 aa16.12■□□□□ 0.17
MTHFD1-204ENST00000553405 NKX2-4Q9H2Z4 354 aa16.12■□□□□ 0.17
MTHFD1-204ENST00000553405 KANSL3Q9P2N6 904 aa16.12■□□□□ 0.17
MTHFD1-204ENST00000553405 CACNG4Q9UBN1 327 aa16.12■□□□□ 0.17
MTHFD1-204ENST00000553405 TUBGCP4Q9UGJ1 667 aa16.12■□□□□ 0.17
MTHFD1-204ENST00000553405 DERAQ9Y315 318 aa16.12■□□□□ 0.17
MTHFD1-204ENST00000553405 C2CD2Q9Y426 696 aa16.12■□□□□ 0.17
MTHFD1-204ENST00000553405 BICDL2A1A5D9 508 aa16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 SLC16A3O15427 465 aaKnown RBP16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 LETM1O95202 739 aaPredicted RBP16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 IL18RAPO95256 599 aa16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 THP07101 528 aa16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 RPL13P26373 211 aaKnown RBP16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 ERVK-21P61565 698 aa16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 PPP2R3AQ06190 1150 aa16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 ENPEPQ07075 957 aa16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 NCAPHQ15003 741 aa16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 TMEM173Q86WV6 379 aaPredicted RBP16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 FIBCD1Q8N539 461 aa16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 RDH13Q8NBN7 331 aa16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 URGCPQ8TCY9 931 aa16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 PARD3BQ8TEW8 1205 aa16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 BCL7CQ8WUZ0 217 aaPredicted RBP16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 ZNF516Q92618 1163 aa16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 CEP63Q96MT8 703 aa16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 TSG101Q99816 390 aa16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 C17orf80Q9BSJ5 609 aa16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 DNAJC25Q9H1X3 360 aa16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 HSD3B7Q9H2F3 369 aa16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 MARCH5Q9NX47 278 aa16.11■□□□□ 0.17
MTHFD1-204ENST00000553405 C5orf67F2Z3F1 127 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 F8W810 466 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 CETN3O15182 167 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 GALTP07902 379 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 CYP3A5P20815 502 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 PSMC2P35998 433 aaKnown RBP16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 PBX3P40426 434 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 SLC11A1P49279 550 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 GUCY2FP51841 1108 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 MARSP56192 900 aaKnown RBP16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 DLG4P78352 724 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 TUSC3Q13454 348 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 HABP4Q5JVS0 413 aaKnown RBP16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 SPATA1Q5VX52 437 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 CEP135Q66GS9 1140 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 FILIP1Q7Z7B0 1213 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 CSGALNACT2Q8N6G5 542 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 COLGALT1Q8NBJ5 622 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 OR5B17Q8NGF7 314 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 ENOX1Q8TC92 643 aaKnown RBP16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 TMC2Q8TDI7 906 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 TIFAQ96CG3 184 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 LRCH3Q96II8 777 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 RPS6KC1Q96S38 1066 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 POP1Q99575 1024 aaKnown RBP16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 TMEM175Q9BSA9 504 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 TTYH1Q9H313 450 aaPredicted RBP16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 GOLGA2P5Q9HBQ8 144 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 INTS13Q9NVM9 706 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 DACH1Q9UI36 760 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 MSRAQ9UJ68 235 aa16.1■□□□□ 0.17
MTHFD1-204ENST00000553405 ANO9A1A5B4 782 aa16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 EPOPA6NHQ4 379 aa16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 LRRIQ3A6PVS8 624 aaPredicted RBP16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 LRPAP1P30533 357 aa16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 BMPR1AP36894 532 aa16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 BCAR1P56945 870 aa16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 TMEM132DQ14C87 1099 aa16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 UPP1Q16831 310 aa16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 ANO6Q4KMQ2 910 aa16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 C15orf39Q6ZRI6 1047 aa16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 NT5DC4Q86YG4 428 aa16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 FAM186BQ8IYM0 893 aa16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 SLC39A11Q8N1S5 342 aa16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 C3orf58Q8NDZ4 430 aa16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 KIF12Q96FN5 646 aa16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 CGRRF1Q99675 332 aa16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 BPIFA3Q9BQP9 254 aa16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 VN1R3Q9BXE9 311 aa16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 SRRTQ9BXP5 876 aaKnown RBP16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 UBQLN1Q9UMX0 589 aaKnown RBP16.09■□□□□ 0.17
MTHFD1-204ENST00000553405 CASTOR2A6NHX0 329 aa16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 NRP1O14786 923 aa16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 PPEF2O14830 753 aa16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 ZC3H11AO75152 810 aaKnown RBP eCLIP16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 ITGB1P05556 798 aa16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 CCDC192P0DO97 292 aa16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 LAG3P18627 525 aa16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 BFSP1Q12934 665 aa16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 HSP90AA2PQ14568 343 aaPredicted RBP16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 EPC2Q52LR7 807 aa16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 LMBRD2Q68DH5 695 aaPredicted RBP16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 KCNT2Q6UVM3 1135 aa16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 INTS8Q75QN2 995 aaKnown RBP16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 WDR49Q8IV35 697 aa16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 RNF168Q8IYW5 571 aaPredicted RBP16.08■□□□□ 0.16
MTHFD1-204ENST00000553405 C1orf127Q8N9H9 656 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms