RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 CNNM4Q6P4Q7 775 aa16.73■□□□□ 0.27
SHMT2-204ENST00000553324 TAS1R1Q7RTX1 841 aa16.73■□□□□ 0.27
SHMT2-204ENST00000553324 VN1R2Q8NFZ6 395 aa16.73■□□□□ 0.27
SHMT2-204ENST00000553324 ACCSQ96QU6 501 aa16.73■□□□□ 0.27
SHMT2-204ENST00000553324 TTPALQ9BTX7 342 aa16.73■□□□□ 0.27
SHMT2-204ENST00000553324 MSTO1Q9BUK6 570 aa16.73■□□□□ 0.27
SHMT2-204ENST00000553324 STRA6Q9BX79 667 aa16.73■□□□□ 0.27
SHMT2-204ENST00000553324 TRIM9Q9C026 710 aa16.73■□□□□ 0.27
SHMT2-204ENST00000553324 TMEM206Q9H813 350 aa16.73■□□□□ 0.27
SHMT2-204ENST00000553324 RPF1Q9H9Y2 349 aaKnown RBP16.73■□□□□ 0.27
SHMT2-204ENST00000553324 FNIP2Q9P278 1114 aa16.73■□□□□ 0.27
SHMT2-204ENST00000553324 KCNH3Q9ULD8 1083 aa16.73■□□□□ 0.27
SHMT2-204ENST00000553324 BRWD1Q9NSI6 2320 aa16.72■□□□□ 0.27
SHMT2-204ENST00000553324 XPOTO43592 962 aaKnown RBP16.72■□□□□ 0.27
SHMT2-204ENST00000553324 PPP1R37O75864 691 aa16.72■□□□□ 0.27
SHMT2-204ENST00000553324 GCNT3O95395 438 aa16.72■□□□□ 0.27
SHMT2-204ENST00000553324 CMA1P23946 247 aa16.72■□□□□ 0.27
SHMT2-204ENST00000553324 CLCNKBP51801 687 aa16.72■□□□□ 0.27
SHMT2-204ENST00000553324 L1TD1Q5T7N2 865 aaKnown RBP16.72■□□□□ 0.27
SHMT2-204ENST00000553324 ADHFE1Q8IWW8 467 aa16.72■□□□□ 0.27
SHMT2-204ENST00000553324 CEP57L1Q8IYX8 460 aa16.72■□□□□ 0.27
SHMT2-204ENST00000553324 GJD3Q8N144 294 aa16.72■□□□□ 0.27
SHMT2-204ENST00000553324 SLC22A17Q8WUG5 538 aa16.72■□□□□ 0.27
SHMT2-204ENST00000553324 LEO1Q8WVC0 666 aaPredicted RBP16.72■□□□□ 0.27
SHMT2-204ENST00000553324 RABGGTAQ92696 567 aa16.72■□□□□ 0.27
SHMT2-204ENST00000553324 C7orf25Q9BPX7 421 aa16.72■□□□□ 0.27
SHMT2-204ENST00000553324 PAAF1Q9BRP4 392 aa16.72■□□□□ 0.27
SHMT2-204ENST00000553324 CXCL16Q9H2A7 254 aa16.72■□□□□ 0.27
SHMT2-204ENST00000553324 USP25Q9UHP3 1055 aa16.72■□□□□ 0.27
SHMT2-204ENST00000553324 STYXL1Q9Y6J8 313 aa16.72■□□□□ 0.27
SHMT2-204ENST00000553324 F8W810 466 aa16.71■□□□□ 0.27
SHMT2-204ENST00000553324 KIF4AO95239 1232 aa16.71■□□□□ 0.27
SHMT2-204ENST00000553324 CLCN4P51793 760 aa16.71■□□□□ 0.27
SHMT2-204ENST00000553324 PPP2R3AQ06190 1150 aa16.71■□□□□ 0.27
SHMT2-204ENST00000553324 FAM171A1Q5VUB5 890 aa16.71■□□□□ 0.27
SHMT2-204ENST00000553324 SYCP3Q8IZU3 236 aa16.71■□□□□ 0.27
SHMT2-204ENST00000553324 HDAC7Q8WUI4 952 aa16.71■□□□□ 0.27
SHMT2-204ENST00000553324 ZMAT2Q96NC0 199 aaKnown RBP16.71■□□□□ 0.27
SHMT2-204ENST00000553324 NECAB3Q96P71 396 aaPredicted RBP16.71■□□□□ 0.27
SHMT2-204ENST00000553324 HAPLN2Q9GZV7 340 aa16.71■□□□□ 0.27
SHMT2-204ENST00000553324 S1PR5Q9H228 398 aa16.71■□□□□ 0.27
SHMT2-204ENST00000553324 ADAM7Q9H2U9 754 aa16.71■□□□□ 0.27
SHMT2-204ENST00000553324 TBC1D7Q9P0N9 293 aa16.71■□□□□ 0.27
SHMT2-204ENST00000553324 AGO2Q9UKV8 859 aaKnown RBP16.71■□□□□ 0.27
SHMT2-204ENST00000553324 TTC26A0AVF1 554 aa16.7■□□□□ 0.26
SHMT2-204ENST00000553324 TEX28O15482 410 aa16.7■□□□□ 0.26
SHMT2-204ENST00000553324 ADRB2P07550 413 aa16.7■□□□□ 0.26
SHMT2-204ENST00000553324 SLFN14P0C7P3 912 aa16.7■□□□□ 0.26
SHMT2-204ENST00000553324 CXCL8P10145 99 aa16.7■□□□□ 0.26
SHMT2-204ENST00000553324 CYP3A5P20815 502 aa16.7■□□□□ 0.26
SHMT2-204ENST00000553324 ASIC1P78348 528 aa16.7■□□□□ 0.26
SHMT2-204ENST00000553324 RBM10P98175 930 aaKnown RBP16.7■□□□□ 0.26
SHMT2-204ENST00000553324 SEZ6Q53EL9 994 aa16.7■□□□□ 0.26
SHMT2-204ENST00000553324 SYCE2Q6PIF2 218 aa16.7■□□□□ 0.26
SHMT2-204ENST00000553324 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.7■□□□□ 0.26
SHMT2-204ENST00000553324 CEP57Q86XR8 500 aa16.7■□□□□ 0.26
SHMT2-204ENST00000553324 HASPINQ8TF76 798 aa16.7■□□□□ 0.26
SHMT2-204ENST00000553324 RIN2Q8WYP3 895 aaPredicted RBP16.7■□□□□ 0.26
SHMT2-204ENST00000553324 POMGNT1Q8WZA1 660 aa16.7■□□□□ 0.26
SHMT2-204ENST00000553324 SUSD6Q92537 303 aa16.7■□□□□ 0.26
SHMT2-204ENST00000553324 STAMQ92783 540 aa16.7■□□□□ 0.26
SHMT2-204ENST00000553324 FBXL18Q96ME1 805 aa16.7■□□□□ 0.26
SHMT2-204ENST00000553324 NECTIN4Q96NY8 510 aa16.7■□□□□ 0.26
SHMT2-204ENST00000553324 CPSF3Q9UKF6 684 aaKnown RBP16.7■□□□□ 0.26
SHMT2-204ENST00000553324 UBQLN1Q9UMX0 589 aaKnown RBP16.7■□□□□ 0.26
SHMT2-204ENST00000553324 USP15Q9Y4E8 981 aaPredicted RBP16.7■□□□□ 0.26
SHMT2-204ENST00000553324 SPDYE4A6NLX3 237 aa16.69■□□□□ 0.26
SHMT2-204ENST00000553324 ANKRD63C9JTQ0 380 aa16.69■□□□□ 0.26
SHMT2-204ENST00000553324 PODXLO00592 558 aa16.69■□□□□ 0.26
SHMT2-204ENST00000553324 FAM189A1O60320 539 aa16.69■□□□□ 0.26
SHMT2-204ENST00000553324 LDHAP00338 332 aaKnown RBP16.69■□□□□ 0.26
SHMT2-204ENST00000553324 GLUD1P00367 558 aa16.69■□□□□ 0.26
SHMT2-204ENST00000553324 PAX3P23760 479 aa16.69■□□□□ 0.26
SHMT2-204ENST00000553324 SSTR3P32745 418 aaPredicted RBP16.69■□□□□ 0.26
SHMT2-204ENST00000553324 ATAT1Q5SQI0 421 aa16.69■□□□□ 0.26
SHMT2-204ENST00000553324 SLC39A4Q6P5W5 647 aa16.69■□□□□ 0.26
SHMT2-204ENST00000553324 UNC13DQ70J99 1090 aa16.69■□□□□ 0.26
SHMT2-204ENST00000553324 PIK3R5Q8WYR1 880 aa16.69■□□□□ 0.26
SHMT2-204ENST00000553324 KIF12Q96FN5 646 aa16.69■□□□□ 0.26
SHMT2-204ENST00000553324 RIPOR3Q96MK2 946 aa16.69■□□□□ 0.26
SHMT2-204ENST00000553324 PHF7Q9BWX1 381 aaPredicted RBP16.69■□□□□ 0.26
SHMT2-204ENST00000553324 PLEKHA4Q9H4M7 779 aa16.69■□□□□ 0.26
SHMT2-204ENST00000553324 ASB7Q9H672 318 aa16.69■□□□□ 0.26
SHMT2-204ENST00000553324 CACNG4Q9UBN1 327 aa16.69■□□□□ 0.26
SHMT2-204ENST00000553324 DERAQ9Y315 318 aa16.69■□□□□ 0.26
SHMT2-204ENST00000553324 NUB1Q9Y5A7 615 aa16.69■□□□□ 0.26
SHMT2-204ENST00000553324 TTC28Q96AY4 2481 aa16.69■□□□□ 0.26
SHMT2-204ENST00000553324 PVALEFA0A1B0GWK0 134 aa16.68■□□□□ 0.26
SHMT2-204ENST00000553324 C19orf67A6NJJ6 358 aa16.68■□□□□ 0.26
SHMT2-204ENST00000553324 LACTBL1A8MY62 500 aa16.68■□□□□ 0.26
SHMT2-204ENST00000553324 KIAA0391O15091 583 aaKnown RBP16.68■□□□□ 0.26
SHMT2-204ENST00000553324 MYL1P05976 194 aa16.68■□□□□ 0.26
SHMT2-204ENST00000553324 EPCAMP16422 314 aa16.68■□□□□ 0.26
SHMT2-204ENST00000553324 GARTP22102 1010 aa16.68■□□□□ 0.26
SHMT2-204ENST00000553324 FGFR3P22607 806 aa16.68■□□□□ 0.26
SHMT2-204ENST00000553324 TNFSF9P41273 254 aa16.68■□□□□ 0.26
SHMT2-204ENST00000553324 MTHFRP42898 656 aa16.68■□□□□ 0.26
SHMT2-204ENST00000553324 ZP2Q05996 745 aa16.68■□□□□ 0.26
SHMT2-204ENST00000553324 SOX4Q06945 474 aaPredicted RBP16.68■□□□□ 0.26
SHMT2-204ENST00000553324 CBX2Q14781 532 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms