RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 UNC5BQ8IZJ1 945 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 CELF5Q8N6W0 485 aaKnown RBP6.79□□□□□ -1.32
SCFD1-208ENST00000553278 OR7D4Q8NG98 312 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 DCAF5Q96JK2 942 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 SNX22Q96L94 193 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 TMEM209Q96SK2 561 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 SEC62Q99442 399 aaKnown RBP6.79□□□□□ -1.32
SCFD1-208ENST00000553278 P2RX7Q99572 595 aaKnown RBP6.79□□□□□ -1.32
SCFD1-208ENST00000553278 FAM167BQ9BTA0 163 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 MRPL46Q9H2W6 279 aaKnown RBP6.79□□□□□ -1.32
SCFD1-208ENST00000553278 PRDM7Q9NQW5 492 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 LANCL2Q9NS86 450 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 GJB4Q9NTQ9 266 aa6.79□□□□□ -1.32
SCFD1-208ENST00000553278 ITIH6Q6UXX5 1313 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 TRIM43BA6NCK2 446 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 LGALS16A8MUM7 142 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 ACKR2O00590 384 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 GPR32O75388 356 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 KCNJ5P48544 419 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 ARFIP2P53365 341 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 SOX8P57073 446 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 SESN2P58004 480 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-208ENST00000553278 TAF5Q15542 800 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 WDR72Q3MJ13 1102 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 FAAH2Q6GMR7 532 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 ZNF280DQ6N043 979 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 ZC3H14Q6PJT7 736 aaKnown RBP6.78□□□□□ -1.32
SCFD1-208ENST00000553278 CATSPERGQ6ZRH7 1159 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 TAS1R1Q7RTX1 841 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 SPRED2Q7Z698 418 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 KRTAP1-3Q8IUG1 177 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 SDR16C5Q8N3Y7 309 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 GIMAP8Q8ND71 665 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-208ENST00000553278 TRIM43Q96BQ3 446 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-208ENST00000553278 C18orf8Q96DM3 657 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 TACO1Q9BSH4 297 aaKnown RBP6.78□□□□□ -1.32
SCFD1-208ENST00000553278 SLC26A6Q9BXS9 759 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 SENP6Q9GZR1 1112 aaPredicted RBP6.78□□□□□ -1.32
SCFD1-208ENST00000553278 BCAS3Q9H6U6 928 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 TMEM140Q9NV12 185 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 CCDC39Q9UFE4 941 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 MAN2B2Q9Y2E5 1009 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 RABGAP1Q9Y3P9 1069 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 HCFC2Q9Y5Z7 792 aa6.78□□□□□ -1.32
SCFD1-208ENST00000553278 NT5C1B-RDH14C9J2C7 533 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 EYA2O00167 538 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 EXOC5O00471 708 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 DAPK3O43293 454 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 AMY1AP04745 511 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 GAAP10253 952 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 SDHBP21912 280 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 SREBF1P36956 1147 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 RXRGP48443 463 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 PIK3CGP48736 1102 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 CTXN1P60606 82 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 SPARCL1Q14515 664 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 PLEKHN1Q494U1 663 aaPredicted RBP6.77□□□□□ -1.33
SCFD1-208ENST00000553278 EMC10Q5UCC4 262 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 MZT2BQ6NZ67 158 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 CNKSR3Q6P9H4 555 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 C1orf122Q6ZSJ8 110 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 RNF44Q7L0R7 432 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 OTOP2Q7RTS6 562 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 FAM90A1Q86YD7 464 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 CYP2W1Q8TAV3 490 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 UIMC1Q96RL1 719 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 DPH1Q9BZG8 443 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 SMC4Q9NTJ3 1288 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 ZFP69BQ9UJL9 534 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 FBXO10Q9UK96 956 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 TMEM98Q9Y2Y6 226 aa6.77□□□□□ -1.33
SCFD1-208ENST00000553278 A0A0G2JNJ9 132 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 CLCA1A8K7I4 914 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 H0Y858 1186 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 F2RL2O00254 374 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 BTN3A1O00481 513 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 PODXLO00592 558 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 TCERG1O14776 1098 aaKnown RBP6.76□□□□□ -1.33
SCFD1-208ENST00000553278 AREL1O15033 823 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 N4BP3O15049 544 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 ARHGAP6O43182 974 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 IL18BPO95998 194 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 AHSGP02765 367 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 MT-ND5P03915 603 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 MYL4P12829 197 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 HNRNPLP14866 589 aaKnown RBP eCLIP6.76□□□□□ -1.33
SCFD1-208ENST00000553278 CRHR1P34998 444 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 FLT3LGP49771 235 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 MPP1Q00013 466 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 SETQ01105 290 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-208ENST00000553278 SLC13A2Q13183 592 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 RAB32Q13637 225 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 PTK2BQ14289 1009 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 HABP2Q14520 560 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-208ENST00000553278 ATP2B3Q16720 1220 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 FAM180BQ6P0A1 224 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 ZNF574Q6ZN55 896 aaPredicted RBP6.76□□□□□ -1.33
SCFD1-208ENST00000553278 ZGPATQ8N5A5 531 aaKnown RBP6.76□□□□□ -1.33
SCFD1-208ENST00000553278 FAM26EQ8N5C1 309 aa6.76□□□□□ -1.33
SCFD1-208ENST00000553278 SLC30A5Q8TAD4 765 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms