RNA–Protein interactions for RNA: ENST00000553192.5

SNRPF-205, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 4 BASIC

Gene SNRPF, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-205ENST00000553192 CASTOR2A6NHX0 329 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 EIF4E1BA6NMX2 242 aaKnown RBP13.12□□□□□ -0.31
SNRPF-205ENST00000553192 HIP1O00291 1037 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 MSH4O15457 936 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 C1QL1O75973 258 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 GJA1P17302 382 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 KPNA1P52294 538 aaPredicted RBP13.12□□□□□ -0.31
SNRPF-205ENST00000553192 FUT2Q10981 343 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 TUSC3Q13454 348 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 UAP1L1Q3KQV9 507 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 PLA2G4FQ68DD2 849 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 RALGPS2Q86X27 583 aaPredicted RBP13.12□□□□□ -0.31
SNRPF-205ENST00000553192 LURAP1LQ8IV03 231 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 HS6ST3Q8IZP7 471 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 CHCHD4Q8N4Q1 142 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 ZNF579Q8NAF0 562 aaKnown RBP13.12□□□□□ -0.31
SNRPF-205ENST00000553192 FANCBQ8NB91 859 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 TTC8Q8TAM2 541 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 ZSCAN18Q8TBC5 510 aaPredicted RBP13.12□□□□□ -0.31
SNRPF-205ENST00000553192 CSGALNACT1Q8TDX6 532 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 PRPF31Q8WWY3 499 aaKnown RBP13.12□□□□□ -0.31
SNRPF-205ENST00000553192 CSRNP2Q9H175 543 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 OSBPL3Q9H4L5 887 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 SNTG2Q9NY99 539 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 CDY1Q9Y6F8 540 aa13.12□□□□□ -0.31
SNRPF-205ENST00000553192 ASCC3Q8N3C0 2202 aaKnown RBP13.12□□□□□ -0.31
SNRPF-205ENST00000553192 TENM4Q6N022 2769 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 CHADO15335 359 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 MEFVO15553 781 aaPredicted RBP13.11□□□□□ -0.31
SNRPF-205ENST00000553192 PRC1O43663 620 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 SEC24BO95487 1268 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 CALM1P0DP23 149 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 CALM2P0DP24 149 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 CALM3P0DP25 149 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 FGFR3P22607 806 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 SFNP31947 248 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 JAK3P52333 1124 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 NPEPPSP55786 919 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 IRX4P78413 519 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 SIM1P81133 766 aaPredicted RBP13.11□□□□□ -0.31
SNRPF-205ENST00000553192 SPIRE1Q08AE8 756 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 LAMTOR4Q0VGL1 99 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 AMHR2Q16671 573 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 B3GNT9Q6UX72 402 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.11□□□□□ -0.31
SNRPF-205ENST00000553192 NFXL1Q6ZNB6 911 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 PLEKHM2Q8IWE5 1019 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 TMEM143Q96AN5 459 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 LRRC3BQ96PB8 259 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 MTA3Q9BTC8 594 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 CXCL16Q9H2A7 254 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 BARHL2Q9NY43 387 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 GTSE1Q9NYZ3 720 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 VWA8A3KMH1 1905 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 TDRD15B5MCY1 1934 aaKnown RBP13.11□□□□□ -0.31
SNRPF-205ENST00000553192 APC2O95996 2303 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 EML5Q05BV3 1969 aa13.11□□□□□ -0.31
SNRPF-205ENST00000553192 PCNX2A6NKB5 2137 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 CCDC69A6NI79 296 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 DDX11L8A8MPP1 907 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 ZNF197O14709 1029 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 KHNYNO15037 678 aaKnown RBP13.1□□□□□ -0.31
SNRPF-205ENST00000553192 LRG1P02750 347 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 FCHO2Q0JRZ9 810 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 C19orf57Q0VDD7 668 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 ELF2Q15723 593 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 NAB2Q15742 525 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 NOTUMQ6P988 496 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 PDXDC1Q6P996 788 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 CD300LGQ6UXG3 332 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 PDZD4Q76G19 769 aaPredicted RBP13.1□□□□□ -0.31
SNRPF-205ENST00000553192 PIP4P1Q86T03 277 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 RNF149Q8NC42 400 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 SLC5A5Q92911 643 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 CCDC51Q96ER9 411 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 LRIG1Q96JA1 1093 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 ZFYVE19Q96K21 471 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 RIT2Q99578 217 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 MKNK1Q9BUB5 465 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 BACE2Q9Y5Z0 518 aa13.1□□□□□ -0.31
SNRPF-205ENST00000553192 V9GY48 417 aaPredicted RBP13.1□□□□□ -0.31
SNRPF-205ENST00000553192 PTGESO14684 152 aa13.09□□□□□ -0.31
SNRPF-205ENST00000553192 GAS7O60861 476 aa13.09□□□□□ -0.31
SNRPF-205ENST00000553192 RHOBTB1O94844 696 aa13.09□□□□□ -0.31
SNRPF-205ENST00000553192 ERLIN2O94905 339 aa13.09□□□□□ -0.31
SNRPF-205ENST00000553192 ABLIM3O94929 683 aa13.09□□□□□ -0.31
SNRPF-205ENST00000553192 SEC24AO95486 1093 aa13.09□□□□□ -0.31
SNRPF-205ENST00000553192 PLA2G2AP14555 144 aa13.09□□□□□ -0.31
SNRPF-205ENST00000553192 ARF4P18085 180 aaPredicted RBP13.09□□□□□ -0.31
SNRPF-205ENST00000553192 AXLP30530 894 aa13.09□□□□□ -0.31
SNRPF-205ENST00000553192 LIFRP42702 1097 aa13.09□□□□□ -0.31
SNRPF-205ENST00000553192 FAM193AP78312 1265 aa13.09□□□□□ -0.31
SNRPF-205ENST00000553192 ROR1Q01973 937 aa13.09□□□□□ -0.31
SNRPF-205ENST00000553192 ELAVL2Q12926 359 aaKnown RBP13.09□□□□□ -0.31
SNRPF-205ENST00000553192 LARP1BQ659C4 914 aaKnown RBP13.09□□□□□ -0.31
SNRPF-205ENST00000553192 RAB44Q7Z6P3 723 aaPredicted RBP13.09□□□□□ -0.31
SNRPF-205ENST00000553192 CDR2LQ86X02 465 aaPredicted RBP13.09□□□□□ -0.31
SNRPF-205ENST00000553192 TMTC2Q8N394 836 aa13.09□□□□□ -0.31
SNRPF-205ENST00000553192 EXOC6Q8TAG9 804 aa13.09□□□□□ -0.31
SNRPF-205ENST00000553192 PSPC1Q8WXF1 523 aaKnown RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms