RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 MAMDC4Q6UXC1 1216 aa9.76□□□□□ -0.85
RAB3IP-218ENST00000553099 NT5DC3Q86UY8 548 aa9.76□□□□□ -0.85
RAB3IP-218ENST00000553099 RHOT2Q8IXI1 618 aa9.76□□□□□ -0.85
RAB3IP-218ENST00000553099 MMGT1Q8N4V1 131 aa9.76□□□□□ -0.85
RAB3IP-218ENST00000553099 OR6J1Q8NGC5 347 aa9.76□□□□□ -0.85
RAB3IP-218ENST00000553099 NPLOC4Q8TAT6 608 aa9.76□□□□□ -0.85
RAB3IP-218ENST00000553099 KCNN1Q92952 543 aa9.76□□□□□ -0.85
RAB3IP-218ENST00000553099 ZNF653Q96CK0 615 aa9.76□□□□□ -0.85
RAB3IP-218ENST00000553099 ISCUQ9H1K1 167 aa9.76□□□□□ -0.85
RAB3IP-218ENST00000553099 TUT1Q9H6E5 874 aaKnown RBP9.76□□□□□ -0.85
RAB3IP-218ENST00000553099 UMODL1Q5DID0 1318 aa9.76□□□□□ -0.85
RAB3IP-218ENST00000553099 TRPM7Q96QT4 1865 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 A0A087WZ62 844 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 TUBBP07437 444 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 SSTR3P32745 418 aaPredicted RBP9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 ZNF157P51786 506 aaPredicted RBP9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 GPC5P78333 572 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 TFAMQ00059 246 aaKnown RBP9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 ACVR2BQ13705 512 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 SCARA3Q6AZY7 606 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 MPZL3Q6UWV2 235 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 ZNF572Q7Z3I7 529 aaPredicted RBP9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 PPP1R13LQ8WUF5 828 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 HNRNPLLQ8WVV9 542 aaKnown RBP9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 FDXACB1Q9BRP7 624 aaPredicted RBP9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 SELENOOQ9BVL4 669 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 FUT8Q9BYC5 575 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 KATNBL1Q9H079 304 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 ABHD16BQ9H3Z7 469 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 APOBEC3GQ9HC16 384 aaKnown RBP9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 RNF14Q9UBS8 474 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 DMGDHQ9UI17 866 aaKnown RBP9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 GINS2Q9Y248 185 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 PCDHB4Q9Y5E5 795 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 A0A0U1RQG5 324 aaPredicted RBP9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 TARSL2A2RTX5 802 aaKnown RBP9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 ACKR2O00590 384 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 FAM189A1O60320 539 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 TMEM191BP0C7N4 346 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 MCM3P25205 808 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 TMOD1P28289 359 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 PHKA2P46019 1235 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 PTENP60484 403 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 MBTD1Q05BQ5 628 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 ITIH3Q06033 890 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 CUL2Q13617 745 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 TAF1CQ15572 869 aaPredicted RBP9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 ZNF484Q5JVG2 852 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 PRAMEF19Q5SWL8 479 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 EEF1DP3Q658K8 133 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 ZNF467Q7Z7K2 595 aaPredicted RBP9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 KLHL7Q8IXQ5 586 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 FAM81BQ96LP2 452 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 KRT12Q99456 494 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 ST7Q9NRC1 585 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 NUB1Q9Y5A7 615 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 ZSWIM8A7E2V4 1837 aa9.75□□□□□ -0.85
RAB3IP-218ENST00000553099 ADCY6O43306 1168 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 MMP3P08254 477 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 IQCF3P0C7M6 154 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 GZMAP12544 262 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 MCL1Q07820 350 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 PPFIA1Q13136 1202 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 MESDQ14696 234 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 MAP9Q49MG5 647 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 DUSP28Q4G0W2 176 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 SLFN11Q7Z7L1 901 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 WDR49Q8IV35 697 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 PASD1Q8IV76 773 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 USP38Q8NB14 1042 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 NLRP7Q8WX94 980 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 PBKQ96KB5 322 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 C16orf70Q9BSU1 422 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 AP1M1Q9BXS5 423 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 CPSF3Q9UKF6 684 aaKnown RBP9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 NOC2LQ9Y3T9 749 aaKnown RBP9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 CITO14578 2027 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 PGRMC1O00264 195 aaKnown RBP9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 IGF2BP3O00425 579 aaKnown RBP eCLIP9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 ASAP2O43150 1006 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 PPFIA4O75335 1185 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 CST3P01034 146 aaPredicted RBP9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 CLTAP09496 248 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 CXCL8P10145 99 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 MYBL2P10244 700 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 CD58P19256 250 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 TRPC3Q13507 836 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 C2CD6Q53TS8 623 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 SCARA5Q6ZMJ2 495 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 TSHZ1Q6ZSZ6 1077 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 HDXQ7Z353 690 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 PHLDB2Q86SQ0 1253 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 TMEM192Q8IY95 271 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 ZNF564Q8TBZ8 553 aaPredicted RBP9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 DDX1Q92499 740 aaKnown RBP9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 LENG1Q96BZ8 264 aaPredicted RBP9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 HES6Q96HZ4 224 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 CPB2Q96IY4 423 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 BTBD6Q96KE9 485 aa9.74□□□□□ -0.85
RAB3IP-218ENST00000553099 NUP85Q9BW27 656 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms