RNA–Protein interactions for RNA: ENST00000553071.1

ITGA5-213, Transcript of integrin subunit alpha 5, humanhuman

TSL 1 (best)

Gene ITGA5, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA5-213ENST00000553071 STK39Q9UEW8 545 aa18.65■□□□□ 0.58
ITGA5-213ENST00000553071 ARMCX3Q9UH62 379 aaPredicted RBP18.65■□□□□ 0.58
ITGA5-213ENST00000553071 TNRC18O15417 2968 aaPredicted RBP18.65■□□□□ 0.58
ITGA5-213ENST00000553071 PTGESO14684 152 aa18.64■□□□□ 0.57
ITGA5-213ENST00000553071 TNNI1P19237 187 aa18.64■□□□□ 0.57
ITGA5-213ENST00000553071 ZNF165P49910 485 aa18.64■□□□□ 0.57
ITGA5-213ENST00000553071 VAMP7P51809 220 aa18.64■□□□□ 0.57
ITGA5-213ENST00000553071 MCCD1P59942 119 aaPredicted RBP18.64■□□□□ 0.57
ITGA5-213ENST00000553071 MYL5Q02045 173 aa18.64■□□□□ 0.57
ITGA5-213ENST00000553071 CCDC40Q4G0X9 1142 aa18.64■□□□□ 0.57
ITGA5-213ENST00000553071 PAN2Q504Q3 1202 aaKnown RBP18.64■□□□□ 0.57
ITGA5-213ENST00000553071 LRRC55Q6ZSA7 311 aa18.64■□□□□ 0.57
ITGA5-213ENST00000553071 PARD3BQ8TEW8 1205 aa18.64■□□□□ 0.57
ITGA5-213ENST00000553071 CLP1Q92989 425 aaKnown RBP18.64■□□□□ 0.57
ITGA5-213ENST00000553071 ANKRD36BP1Q96IX9 119 aa18.64■□□□□ 0.57
ITGA5-213ENST00000553071 SLC28A3Q9HAS3 691 aa18.64■□□□□ 0.57
ITGA5-213ENST00000553071 PCDHB12Q9Y5F1 795 aa18.64■□□□□ 0.57
ITGA5-213ENST00000553071 BECN2A8MW95 431 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 TULP1O00294 542 aaPredicted RBP18.63■□□□□ 0.57
ITGA5-213ENST00000553071 TNNC2P02585 160 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 RB1P06400 928 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 TMEM191BP0C7N4 346 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 GTF2H1P32780 548 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 PPM1AP35813 382 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 CASP4P49662 377 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 RABGGTBP53611 331 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 MARSP56192 900 aaKnown RBP18.63■□□□□ 0.57
ITGA5-213ENST00000553071 TPM4P67936 248 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 BFSP1Q12934 665 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 ZBTB6Q15916 424 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 JADE1Q6IE81 842 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 LRSAM1Q6UWE0 723 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 ANKRD20A12PQ8NF67 263 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 CCDC127Q96BQ5 260 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 COLEC11Q9BWP8 271 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 PLVAPQ9BX97 442 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 PBX4Q9BYU1 374 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 GZF1Q9H116 711 aaPredicted RBP18.63■□□□□ 0.57
ITGA5-213ENST00000553071 PDE11AQ9HCR9 933 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 MIOSQ9NXC5 875 aa18.63■□□□□ 0.57
ITGA5-213ENST00000553071 GRXCR1A8MXD5 290 aa18.62■□□□□ 0.57
ITGA5-213ENST00000553071 DLATP10515 647 aaKnown RBP18.62■□□□□ 0.57
ITGA5-213ENST00000553071 GATMP50440 423 aa18.62■□□□□ 0.57
ITGA5-213ENST00000553071 ZNF445P59923 1031 aa18.62■□□□□ 0.57
ITGA5-213ENST00000553071 CLDN10P78369 228 aa18.62■□□□□ 0.57
ITGA5-213ENST00000553071 TFAMQ00059 246 aaKnown RBP18.62■□□□□ 0.57
ITGA5-213ENST00000553071 DSC1Q08554 894 aa18.62■□□□□ 0.57
ITGA5-213ENST00000553071 FAM109BQ6ICB4 259 aaPredicted RBP18.62■□□□□ 0.57
ITGA5-213ENST00000553071 C11orf57Q6ZUT1 292 aaPredicted RBP18.62■□□□□ 0.57
ITGA5-213ENST00000553071 ZSWIM2Q8NEG5 633 aa18.62■□□□□ 0.57
ITGA5-213ENST00000553071 ZMAT2Q96NC0 199 aaKnown RBP18.62■□□□□ 0.57
ITGA5-213ENST00000553071 ZNF558Q96NG5 402 aa18.62■□□□□ 0.57
ITGA5-213ENST00000553071 TGS1Q96RS0 853 aaKnown RBP18.62■□□□□ 0.57
ITGA5-213ENST00000553071 CGRRF1Q99675 332 aa18.62■□□□□ 0.57
ITGA5-213ENST00000553071 TSPY26PQ9H489 355 aa18.62■□□□□ 0.57
ITGA5-213ENST00000553071 NRDE2Q9H7Z3 1164 aa18.62■□□□□ 0.57
ITGA5-213ENST00000553071 INTS13Q9NVM9 706 aa18.62■□□□□ 0.57
ITGA5-213ENST00000553071 FAN1Q9Y2M0 1017 aa18.62■□□□□ 0.57
ITGA5-213ENST00000553071 NFE2L3Q9Y4A8 694 aa18.62■□□□□ 0.57
ITGA5-213ENST00000553071 TMEM265A0A087WTH1 108 aa18.61■□□□□ 0.57
ITGA5-213ENST00000553071 EEF1GP26641 437 aaKnown RBP18.61■□□□□ 0.57
ITGA5-213ENST00000553071 LRPAP1P30533 357 aa18.61■□□□□ 0.57
ITGA5-213ENST00000553071 AFF1P51825 1210 aaKnown RBP18.61■□□□□ 0.57
ITGA5-213ENST00000553071 SPAG1Q07617 926 aa18.61■□□□□ 0.57
ITGA5-213ENST00000553071 GLRA4Q5JXX5 417 aa18.61■□□□□ 0.57
ITGA5-213ENST00000553071 DCLRE1AQ6PJP8 1040 aa18.61■□□□□ 0.57
ITGA5-213ENST00000553071 COLGALT2Q8IYK4 626 aa18.61■□□□□ 0.57
ITGA5-213ENST00000553071 EEF2KMTQ96G04 330 aa18.61■□□□□ 0.57
ITGA5-213ENST00000553071 BORCS6Q96GS4 357 aa18.61■□□□□ 0.57
ITGA5-213ENST00000553071 CWH43Q9H720 699 aa18.61■□□□□ 0.57
ITGA5-213ENST00000553071 ITGA11Q9UKX5 1188 aa18.61■□□□□ 0.57
ITGA5-213ENST00000553071 MRPL42Q9Y6G3 142 aaKnown RBP18.61■□□□□ 0.57
ITGA5-213ENST00000553071 COL4A6Q14031 1691 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 LINC01553A4QN01 128 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 ZC3H11AO75152 810 aaKnown RBP eCLIP18.6■□□□□ 0.578e-8■■■■■ 44.9
ITGA5-213ENST00000553071 DDHD2O94830 711 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 CA3P07451 260 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 GALTP07902 379 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 TPM2P07951 284 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 DNAJB2P25686 324 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 BMPR1AP36894 532 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 PNPLA4P41247 253 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 OR1G1P47890 313 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 BCAR1P56945 870 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 KRT17Q04695 432 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 CETN1Q12798 172 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 KCNT2Q6UVM3 1135 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 ZNF280BQ86YH2 543 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 TIFAQ96CG3 184 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 MED15Q96RN5 788 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 DPP3Q9NY33 737 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 SPG21Q9NZD8 308 aa18.6■□□□□ 0.57
ITGA5-213ENST00000553071 ARHGEF37A1IGU5 675 aa18.59■□□□□ 0.57
ITGA5-213ENST00000553071 GOLGA6L19H0YKK7 550 aa18.59■□□□□ 0.57
ITGA5-213ENST00000553071 RBAK-RBAKDNI3L0D1 243 aa18.59■□□□□ 0.57
ITGA5-213ENST00000553071 MEFVO15553 781 aaPredicted RBP18.59■□□□□ 0.57
ITGA5-213ENST00000553071 TRAPPC3O43617 180 aa18.59■□□□□ 0.57
ITGA5-213ENST00000553071 N4BP1O75113 896 aaKnown RBP18.59■□□□□ 0.57
ITGA5-213ENST00000553071 PHACTR2O75167 634 aa18.59■□□□□ 0.57
ITGA5-213ENST00000553071 NFICP08651 508 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms