RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 STPG1Q5TH74 334 aa12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 PDXDC1Q6P996 788 aa12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 TCEANC2Q96MN5 208 aa12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 LSM14BQ9BX40 385 aaKnown RBP12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 BRD9Q9H8M2 597 aa12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 WRAP73Q9P2S5 460 aaPredicted RBP12.64□□□□□ -0.39
SUPT16H-202ENST00000552829 KLF18A0A0U1RQI7 1052 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 ARHGEF37A1IGU5 675 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 PCNX2A6NKB5 2137 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 ARNTLO00327 626 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 MICAL2O94851 1124 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 KIF4AO95239 1232 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 OR1D2P34982 312 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 QARSP47897 775 aaKnown RBP12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 MBTD1Q05BQ5 628 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 GRM2Q14416 872 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 NAB2Q15742 525 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 BMP2KLQ5H9B9 411 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 FAM78AQ5JUQ0 283 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 UNQ6494/PRO21346Q6UXR6 183 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 DHX32Q7L7V1 743 aaKnown RBP12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 HACE1Q8IYU2 909 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 TCP11Q8WWU5 503 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 IRF7Q92985 503 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 LOXL4Q96JB6 756 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 CEP170P1Q96L14 293 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 ASB16Q96NS5 453 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 TRMT61BQ9BVS5 477 aaKnown RBP12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 ZFP14Q9HCL3 533 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 KLK14Q9P0G3 267 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 MTRRQ9UBK8 725 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 PIAS3Q9Y6X2 628 aa12.63□□□□□ -0.39
SUPT16H-202ENST00000552829 NID2Q14112 1375 aa12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 PTGESO14684 152 aa12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 TDP2O95551 362 aa12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 PTPN2P17706 415 aa12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 FGFR3P22607 806 aa12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 ELAVL2Q12926 359 aaKnown RBP12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 PPP2R5CQ13362 524 aa12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 EMC2Q15006 297 aa12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 AASDHQ4L235 1098 aaPredicted RBP12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 PLA2G2CQ5R387 149 aa12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 MOXD1Q6UVY6 613 aa12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 VITQ6UXI7 678 aa12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 WDR5BQ86VZ2 330 aa12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 CEP57Q86XR8 500 aa12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 TBCKQ8TEA7 893 aa12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 HASPINQ8TF76 798 aa12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 TCEAL4Q96EI5 215 aa12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 XPNPEP1Q9NQW7 623 aa12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 C2orf42Q9NWW7 574 aa12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 VAV3Q9UKW4 847 aa12.62□□□□□ -0.39
SUPT16H-202ENST00000552829 ATG2BQ96BY7 2078 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 GCN1Q92616 2671 aaKnown RBP12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 A0A1B0GUA9 196 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 WDR27A2RRH5 827 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 CASTOR2A6NHX0 329 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 SOBPA7XYQ1 873 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 HAX1O00165 279 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 EPN2O95208 641 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 NPTXRO95502 500 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 P4HBP07237 508 aaKnown RBP12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 PSMC3P17980 439 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 IGFBP6P24592 240 aaPredicted RBP12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 CCNE1P24864 410 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 GDI1P31150 447 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 HOXC13P31276 330 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 RAP1GAPP47736 663 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 SPIRE1Q08AE8 756 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 NCBP1Q09161 790 aaKnown RBP12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 MXD4Q14582 209 aaPredicted RBP12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 TSGA10IPQ3SY00 556 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 SLC27A1Q6PCB7 646 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 CD300LGQ6UXG3 332 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 C4orf19Q8IY42 314 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 ZSWIM3Q96MP5 696 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 NFKBIZQ9BYH8 718 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 CXCL16Q9H2A7 254 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 ARRDC1-AS1Q9H2J1 176 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 TRPV4Q9HBA0 871 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 BACE2Q9Y5Z0 518 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 ITPR1Q14643 2758 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 NCANO14594 1321 aa12.61□□□□□ -0.39
SUPT16H-202ENST00000552829 FLNBO75369 2602 aaKnown RBP12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 CCDC196A0A1B0GTZ2 297 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 TMEM189-UBE2V1I3L0A0 370 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 INO80B-WBP1J3KQ70 363 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 M0R2N6 131 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 AXIN1O15169 862 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 B4GALT5O43286 388 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 DKC1O60832 514 aaKnown RBP eCLIP12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 MOSPD3O75425 235 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 ABLIM3O94929 683 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 SEC24BO95487 1268 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 CCR2P41597 374 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 NTRK3Q16288 839 aa12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 HEATR6Q6AI08 1181 aaKnown RBP12.6□□□□□ -0.39
SUPT16H-202ENST00000552829 LRSAM1Q6UWE0 723 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms