RNA–Protein interactions for RNA: ENST00000552545.1

AC055716.2-201, humanhuman

BASIC

Gene AC055716.2, Length 2,441 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.2-201ENST00000552545 PBX1P40424 430 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 PIK3CAP42336 1068 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 ADKP55263 362 aaKnown RBP9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 TMEM132DQ14C87 1099 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 DUOXA2Q1HG44 320 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 WDR49Q8IV35 697 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 EFCAB13Q8IY85 973 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 TMEM130Q8N3G9 435 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 CACTINQ8WUQ7 758 aaKnown RBP9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 TRIM43Q96BQ3 446 aaPredicted RBP9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 PDLIM2Q96JY6 352 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 TBX21Q9UL17 535 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 R3HCC1Q9Y3T6 440 aaKnown RBP9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 TTC26A0AVF1 554 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 MEFVO15553 781 aaPredicted RBP9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 PON1P27169 355 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 TRPC3Q13507 836 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 GPNMBQ14956 572 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 TDRD10Q5VZ19 366 aaKnown RBP9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 CACNA2D4Q7Z3S7 1137 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 RTN4RL1Q86UN2 441 aaPredicted RBP9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 GPIHBP1Q8IV16 184 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 EHBP1Q8NDI1 1231 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 FBXL13Q8NEE6 735 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 TAS1R2Q8TE23 839 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 PPP1R9BQ96SB3 815 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 PI4K2AQ9BTU6 479 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 INTS2Q9H0H0 1204 aaKnown RBP9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 ASB7Q9H672 318 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 NLRC4Q9NPP4 1024 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 INPP5FQ9Y2H2 1132 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 SIK3Q9Y2K2 1263 aa9.43□□□□□ -0.9
AC055716.2-201ENST00000552545 ALPK3Q96L96 1907 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 TIMP1P01033 207 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 C4BPAP04003 597 aaKnown RBP9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 ITGB8P26012 769 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 GTF2H1P32780 548 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 RAB27AP51159 221 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 GUCY2FP51841 1108 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 POLR2FP61218 127 aaKnown RBP9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 RAPGEF1Q13905 1077 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 DSC3Q14574 896 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 ARID5BQ14865 1188 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 PLEKHG4Q58EX7 1191 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 GJB7Q6PEY0 223 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 TRIM65Q6PJ69 517 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 TRAPPC11Q7Z392 1133 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 CD302Q8IX05 232 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 C7orf61Q8IZ16 206 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 SEMA4DQ92854 862 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 SNX27Q96L92 541 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 ZFP42Q96MM3 310 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 RPS6KC1Q96S38 1066 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 GAD1Q99259 594 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 FTHL17Q9BXU8 183 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 RGS18Q9NS28 235 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 RAB20Q9NX57 234 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 TDRD15B5MCY1 1934 aaKnown RBP9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 RALGAPA2Q2PPJ7 1873 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 A0A0U1RQF3 1178 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 GTPBP10A4D1E9 387 aaKnown RBP9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 EPHB6O15197 1021 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 HLA-DRAP01903 254 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 CSF2RAP15509 400 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 MLH1P40692 756 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 WDR44Q5JSH3 913 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 SCARA3Q6AZY7 606 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 SLC24A5Q71RS6 500 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 RRAGAQ7L523 313 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 ECHDC2Q86YB7 292 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 C18orf25Q96B23 403 aaPredicted RBP9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 PGBD4Q96DM1 585 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 ABHD8Q96I13 439 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 ZNF830Q96NB3 372 aaPredicted RBP9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 NUP58Q9BVL2 599 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 PLEKHA5Q9HAU0 1116 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 IMPACTQ9P2X3 320 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 LRFN2Q9ULH4 789 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 ITIH6Q6UXX5 1313 aa9.42□□□□□ -0.9
AC055716.2-201ENST00000552545 PDCD11Q14690 1871 aaKnown RBP9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 SMIM28A0A1B0GU29 152 aa9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 AKR1B15C9JRZ8 316 aaPredicted RBP9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 RNF225M0QZC1 329 aaPredicted RBP9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 ENPP3O14638 875 aa9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 P4HA2O15460 535 aa9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 PARNO95453 639 aaKnown RBP9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 CST3P01034 146 aaPredicted RBP9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 GYPCP04921 128 aa9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 ITGB3P05106 788 aa9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 ACRP10323 421 aa9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 SKIP12755 728 aa9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 SYN1P17600 705 aa9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 FXR1P51114 621 aaKnown RBP eCLIP9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 AP3M2P53677 418 aa9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 CLDN10P78369 228 aa9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 ARHGAP44Q17R89 818 aa9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 TCTN1Q2MV58 587 aa9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 ZACNQ401N2 412 aa9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 EPC2Q52LR7 807 aa9.41□□□□□ -0.9
AC055716.2-201ENST00000552545 AGMOQ6ZNB7 445 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms