RNA–Protein interactions for RNA: ENST00000552282.1

CALCOCO1-220, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-220ENST00000552282 TIPINQ9BVW5 301 aa17.72■□□□□ 0.43
CALCOCO1-220ENST00000552282 CDT1Q9H211 546 aa17.72■□□□□ 0.43
CALCOCO1-220ENST00000552282 TOPORSQ9NS56 1045 aaPredicted RBP17.72■□□□□ 0.43
CALCOCO1-220ENST00000552282 LRWD1Q9UFC0 647 aa17.72■□□□□ 0.43
CALCOCO1-220ENST00000552282 OTOGLQ3ZCN5 2332 aa17.72■□□□□ 0.43
CALCOCO1-220ENST00000552282 MIA3Q5JRA6 1907 aa17.72■□□□□ 0.43
CALCOCO1-220ENST00000552282 PATJQ8NI35 1801 aa17.72■□□□□ 0.43
CALCOCO1-220ENST00000552282 EP300Q09472 2414 aaPredicted RBP17.71■□□□□ 0.43
CALCOCO1-220ENST00000552282 TRAPPC3O43617 180 aa17.71■□□□□ 0.43
CALCOCO1-220ENST00000552282 B3GAT3O94766 335 aa17.71■□□□□ 0.43
CALCOCO1-220ENST00000552282 MAPK7Q13164 816 aa17.71■□□□□ 0.43
CALCOCO1-220ENST00000552282 RSPO2Q6UXX9 243 aaPredicted RBP17.71■□□□□ 0.43
CALCOCO1-220ENST00000552282 FGF13Q92913 245 aa17.71■□□□□ 0.43
CALCOCO1-220ENST00000552282 FGF14Q92915 247 aa17.71■□□□□ 0.43
CALCOCO1-220ENST00000552282 DDX27Q96GQ7 796 aaKnown RBP17.71■□□□□ 0.43
CALCOCO1-220ENST00000552282 KIF2CQ99661 725 aa17.71■□□□□ 0.43
CALCOCO1-220ENST00000552282 ACO2Q99798 780 aaKnown RBP17.71■□□□□ 0.43
CALCOCO1-220ENST00000552282 NTPCRQ9BSD7 190 aaKnown RBP17.71■□□□□ 0.43
CALCOCO1-220ENST00000552282 SLC38A7Q9NVC3 462 aa17.71■□□□□ 0.43
CALCOCO1-220ENST00000552282 KIAA1024Q9UPX6 916 aa17.71■□□□□ 0.43
CALCOCO1-220ENST00000552282 RBM19Q9Y4C8 960 aaKnown RBP17.71■□□□□ 0.43
CALCOCO1-220ENST00000552282 SMIM28A0A1B0GU29 152 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 ARHGEF37A1IGU5 675 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 K7ERI5 159 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 TBC1D4O60343 1298 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 MYBP10242 640 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 KCNE1P15382 129 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 NPTX2P47972 431 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 TOB1P50616 345 aaPredicted RBP17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 CLCNKBP51801 687 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 TMEM132AQ24JP5 1023 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 HYIQ5T013 277 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 AXDND1Q5T1B0 1012 aaPredicted RBP17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 TAS1R3Q7RTX0 852 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 CEP57Q86XR8 500 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 C3orf58Q8NDZ4 430 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 PJA1Q8NG27 643 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 SLC7A14Q8TBB6 771 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 SNX29Q8TEQ0 813 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 BORCS6Q96GS4 357 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 DRC1Q96MC2 740 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 OSBPL6Q9BZF3 934 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 DDX19AQ9NUU7 478 aaKnown RBP17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 CNTN3Q9P232 1028 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 USP20Q9Y2K6 914 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 GDAQ9Y2T3 454 aa17.7■□□□□ 0.42
CALCOCO1-220ENST00000552282 DNAH14Q0VDD8 3507 aa17.69■□□□□ 0.42
CALCOCO1-220ENST00000552282 SYN3O14994 580 aa17.69■□□□□ 0.42
CALCOCO1-220ENST00000552282 ABLIM3O94929 683 aa17.69■□□□□ 0.42
CALCOCO1-220ENST00000552282 MCF2P10911 925 aa17.69■□□□□ 0.42
CALCOCO1-220ENST00000552282 GUCY2CP25092 1073 aa17.69■□□□□ 0.42
CALCOCO1-220ENST00000552282 OR1D2P34982 312 aa17.69■□□□□ 0.42
CALCOCO1-220ENST00000552282 PRKCQQ04759 706 aa17.69■□□□□ 0.42
CALCOCO1-220ENST00000552282 PTGDRQ13258 359 aa17.69■□□□□ 0.42
CALCOCO1-220ENST00000552282 MRPL58Q14197 206 aaKnown RBP17.69■□□□□ 0.42
CALCOCO1-220ENST00000552282 PARM1Q6UWI2 310 aa17.69■□□□□ 0.42
CALCOCO1-220ENST00000552282 NPAS3Q8IXF0 933 aa17.69■□□□□ 0.42
CALCOCO1-220ENST00000552282 CEP120Q8N960 986 aa17.69■□□□□ 0.42
CALCOCO1-220ENST00000552282 SHDQ96IW2 340 aa17.69■□□□□ 0.42
CALCOCO1-220ENST00000552282 CCDC94Q9BW85 323 aaPredicted RBP17.69■□□□□ 0.42
CALCOCO1-220ENST00000552282 MRPL4Q9BYD3 311 aaKnown RBP17.69■□□□□ 0.42
CALCOCO1-220ENST00000552282 CA14Q9ULX7 337 aa17.69■□□□□ 0.42
CALCOCO1-220ENST00000552282 SIT1Q9Y3P8 196 aa17.69■□□□□ 0.42
CALCOCO1-220ENST00000552282 CDY1Q9Y6F8 540 aa17.69■□□□□ 0.42
CALCOCO1-220ENST00000552282 MICAL2O94851 1124 aa17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 TKTP29401 623 aaKnown RBP17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 MAGEA9P43362 315 aa17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 YARSP54577 528 aaKnown RBP17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 NTHL1P78549 312 aa17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 SOX4Q06945 474 aaPredicted RBP17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 DMP1Q13316 513 aaPredicted RBP17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 ZNF568Q3ZCX4 644 aa17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 GLRA4Q5JXX5 417 aa17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 C1orf186Q6ZWK4 172 aa17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 SPIRE2Q8WWL2 714 aa17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 MMTAG2Q9BU76 263 aaKnown RBP17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 GDE1Q9NZC3 331 aa17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 DNMT3BQ9UBC3 853 aaKnown RBP17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 KCNG1Q9UIX4 513 aa17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 DNM3Q9UQ16 869 aa17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 PCDHB6Q9Y5E3 794 aa17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 CACNA1IQ9P0X4 2223 aa17.68■□□□□ 0.42
CALCOCO1-220ENST00000552282 COL4A2P08572 1712 aa17.67■□□□□ 0.42
CALCOCO1-220ENST00000552282 CCL16O15467 120 aa17.67■□□□□ 0.42
CALCOCO1-220ENST00000552282 HIP1RO75146 1068 aa17.67■□□□□ 0.42
CALCOCO1-220ENST00000552282 ECI2O75521 394 aa17.67■□□□□ 0.42
CALCOCO1-220ENST00000552282 IGFBP6P24592 240 aaPredicted RBP17.67■□□□□ 0.42
CALCOCO1-220ENST00000552282 RPL9P32969 192 aaKnown RBP17.67■□□□□ 0.42
CALCOCO1-220ENST00000552282 PEX3P56589 373 aa17.67■□□□□ 0.42
CALCOCO1-220ENST00000552282 GPC5P78333 572 aa17.67■□□□□ 0.42
CALCOCO1-220ENST00000552282 PFKPQ01813 784 aa17.67■□□□□ 0.42
CALCOCO1-220ENST00000552282 ROR1Q01973 937 aa17.67■□□□□ 0.42
CALCOCO1-220ENST00000552282 NBR1Q14596 966 aa17.67■□□□□ 0.42
CALCOCO1-220ENST00000552282 PABPC1LQ4VXU2 614 aaKnown RBP17.67■□□□□ 0.42
CALCOCO1-220ENST00000552282 KRT79Q5XKE5 535 aa17.67■□□□□ 0.42
CALCOCO1-220ENST00000552282 RINT1Q6NUQ1 792 aa17.67■□□□□ 0.42
CALCOCO1-220ENST00000552282 MPZL3Q6UWV2 235 aa17.67■□□□□ 0.42
CALCOCO1-220ENST00000552282 FAM184AQ8NB25 1140 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms