RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 PDCD11Q14690 1871 aaKnown RBP17.8■□□□□ 0.44
GCN1-209ENST00000551920 CLCNKBP51801 687 aa17.8■□□□□ 0.44
GCN1-209ENST00000551920 GUCY2FP51841 1108 aa17.8■□□□□ 0.44
GCN1-209ENST00000551920 KRT17Q04695 432 aa17.8■□□□□ 0.44
GCN1-209ENST00000551920 HSP90AA2PQ14568 343 aaPredicted RBP17.8■□□□□ 0.44
GCN1-209ENST00000551920 ZBTB6Q15916 424 aa17.8■□□□□ 0.44
GCN1-209ENST00000551920 TCEAL5Q5H9L2 206 aa17.8■□□□□ 0.44
GCN1-209ENST00000551920 CD300LGQ6UXG3 332 aa17.8■□□□□ 0.44
GCN1-209ENST00000551920 DDX53Q86TM3 631 aaKnown RBP17.8■□□□□ 0.44
GCN1-209ENST00000551920 ELOA2Q8IYF1 753 aaPredicted RBP17.8■□□□□ 0.44
GCN1-209ENST00000551920 VPS52Q8N1B4 723 aa17.8■□□□□ 0.44
GCN1-209ENST00000551920 CCDC34Q96HJ3 373 aa17.8■□□□□ 0.44
GCN1-209ENST00000551920 FAM84AQ96KN4 292 aa17.8■□□□□ 0.44
GCN1-209ENST00000551920 TCF25Q9BQ70 676 aa17.8■□□□□ 0.44
GCN1-209ENST00000551920 HSPBP1Q9NZL4 362 aa17.8■□□□□ 0.44
GCN1-209ENST00000551920 MAPK8IP1Q9UQF2 711 aa17.8■□□□□ 0.44
GCN1-209ENST00000551920 UNC80Q8N2C7 3258 aa17.8■□□□□ 0.44
GCN1-209ENST00000551920 CITO14578 2027 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 CARNS1A5YM72 827 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 HIDE1A8MVS5 230 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 CLIC2O15247 247 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 EXTL3O43909 919 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 UPP1Q16831 310 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 PLPP4Q5VZY2 271 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 JADE1Q6IE81 842 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 TAS1R1Q7RTX1 841 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 CBWD2Q8IUF1 395 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 BRSK2Q8IWQ3 736 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 EFCAB13Q8IY85 973 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 AUTS2Q8WXX7 1259 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 FAM212AQ96EL1 285 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 KIF12Q96FN5 646 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 GBP4Q96PP9 640 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 GSDMAQ96QA5 445 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 GPR62Q9BZJ7 368 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 NSUN3Q9H649 340 aaKnown RBP17.79■□□□□ 0.44
GCN1-209ENST00000551920 PRDM6Q9NQX0 595 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 SLC38A7Q9NVC3 462 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 ADAM28Q9UKQ2 775 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 MYO7AQ13402 2215 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 TRIP11Q15643 1979 aa17.79■□□□□ 0.44
GCN1-209ENST00000551920 ANK1P16157 1881 aa17.78■□□□□ 0.44
GCN1-209ENST00000551920 GTF2F1P35269 517 aaKnown RBP eCLIP17.78■□□□□ 0.44
GCN1-209ENST00000551920 CYP2J2P51589 502 aa17.78■□□□□ 0.44
GCN1-209ENST00000551920 HYAL1Q12794 435 aa17.78■□□□□ 0.44
GCN1-209ENST00000551920 FUT10Q6P4F1 479 aa17.78■□□□□ 0.44
GCN1-209ENST00000551920 HS2ST1Q7LGA3 356 aa17.78■□□□□ 0.44
GCN1-209ENST00000551920 C12orf56Q8IXR9 622 aa17.78■□□□□ 0.44
GCN1-209ENST00000551920 GPD1LQ8N335 351 aa17.78■□□□□ 0.44
GCN1-209ENST00000551920 SMARCE1Q969G3 411 aa17.78■□□□□ 0.44
GCN1-209ENST00000551920 CCDC47Q96A33 483 aaKnown RBP17.78■□□□□ 0.44
GCN1-209ENST00000551920 B3GALT6Q96L58 329 aa17.78■□□□□ 0.44
GCN1-209ENST00000551920 FBXL18Q96ME1 805 aa17.78■□□□□ 0.44
GCN1-209ENST00000551920 ENTPD7Q9NQZ7 604 aa17.78■□□□□ 0.44
GCN1-209ENST00000551920 RBAKQ9NYW8 714 aaPredicted RBP17.78■□□□□ 0.44
GCN1-209ENST00000551920 PUF60Q9UHX1 559 aaKnown RBP17.78■□□□□ 0.44
GCN1-209ENST00000551920 MAN1B1Q9UKM7 699 aa17.78■□□□□ 0.44
GCN1-209ENST00000551920 PTPRJQ12913 1337 aa17.77■□□□□ 0.44
GCN1-209ENST00000551920 SPTBN5Q9NRC6 3674 aaKnown RBP17.77■□□□□ 0.44
GCN1-209ENST00000551920 TMEM189-UBE2V1I3L0A0 370 aa17.77■□□□□ 0.44
GCN1-209ENST00000551920 PODXLO00592 558 aa17.77■□□□□ 0.44
GCN1-209ENST00000551920 SMC2O95347 1197 aa17.77■□□□□ 0.44
GCN1-209ENST00000551920 CTSAP10619 480 aa17.77■□□□□ 0.44
GCN1-209ENST00000551920 BMP6P22004 513 aa17.77■□□□□ 0.44
GCN1-209ENST00000551920 POU5F1Q01860 360 aaKnown RBP17.77■□□□□ 0.44
GCN1-209ENST00000551920 COL19A1Q14993 1142 aa17.77■□□□□ 0.44
GCN1-209ENST00000551920 PTPN14Q15678 1187 aa17.77■□□□□ 0.44
GCN1-209ENST00000551920 ZCWPW2Q504Y3 356 aa17.77■□□□□ 0.44
GCN1-209ENST00000551920 GUF1Q8N442 669 aaKnown RBP17.77■□□□□ 0.44
GCN1-209ENST00000551920 NOC3LQ8WTT2 800 aaKnown RBP17.77■□□□□ 0.44
GCN1-209ENST00000551920 UROC1Q96N76 676 aa17.77■□□□□ 0.44
GCN1-209ENST00000551920 HERC2P3Q9BVR0 1158 aa17.77■□□□□ 0.44
GCN1-209ENST00000551920 COLEC11Q9BWP8 271 aa17.77■□□□□ 0.44
GCN1-209ENST00000551920 ASB7Q9H672 318 aa17.77■□□□□ 0.44
GCN1-209ENST00000551920 RMND1Q9NWS8 449 aa17.77■□□□□ 0.44
GCN1-209ENST00000551920 HOOK1Q9UJC3 728 aaKnown RBP17.77■□□□□ 0.44
GCN1-209ENST00000551920 C2orf71A6NGG8 1288 aa17.76■□□□□ 0.43
GCN1-209ENST00000551920 PPEF2O14830 753 aa17.76■□□□□ 0.43
GCN1-209ENST00000551920 KIAA0391O15091 583 aaKnown RBP17.76■□□□□ 0.43
GCN1-209ENST00000551920 B3GAT3O94766 335 aa17.76■□□□□ 0.43
GCN1-209ENST00000551920 SOD2P04179 222 aa17.76■□□□□ 0.43
GCN1-209ENST00000551920 SNRPFP62306 86 aaKnown RBP17.76■□□□□ 0.43
GCN1-209ENST00000551920 TMEM132DQ14C87 1099 aa17.76■□□□□ 0.43
GCN1-209ENST00000551920 CAMK4Q16566 473 aa17.76■□□□□ 0.43
GCN1-209ENST00000551920 ZNF658Q5TYW1 1059 aaPredicted RBP17.76■□□□□ 0.43
GCN1-209ENST00000551920 TMC7Q7Z402 723 aa17.76■□□□□ 0.43
GCN1-209ENST00000551920 CD302Q8IX05 232 aa17.76■□□□□ 0.43
GCN1-209ENST00000551920 MICAL1Q8TDZ2 1067 aa17.76■□□□□ 0.43
GCN1-209ENST00000551920 GZF1Q9H116 711 aaPredicted RBP17.76■□□□□ 0.43
GCN1-209ENST00000551920 PDE11AQ9HCR9 933 aa17.76■□□□□ 0.43
GCN1-209ENST00000551920 UBQLN1Q9UMX0 589 aaKnown RBP17.76■□□□□ 0.43
GCN1-209ENST00000551920 C2CD2Q9Y426 696 aa17.76■□□□□ 0.43
GCN1-209ENST00000551920 SF3B1O75533 1304 aaKnown RBP eCLIP17.75■□□□□ 0.43
GCN1-209ENST00000551920 I3L4J1 428 aa17.75■□□□□ 0.43
GCN1-209ENST00000551920 PDXKO00764 312 aa17.75■□□□□ 0.43
GCN1-209ENST00000551920 PER2O15055 1255 aa17.75■□□□□ 0.43
GCN1-209ENST00000551920 LILRB3O75022 631 aa17.75■□□□□ 0.43
GCN1-209ENST00000551920 IL18RAPO95256 599 aa17.75■□□□□ 0.43
GCN1-209ENST00000551920 LDHAP00338 332 aaKnown RBP17.75■□□□□ 0.43
GCN1-209ENST00000551920 LRPAP1P30533 357 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms