RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 ELAVL2Q12926 359 aaKnown RBP19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 PPP2R5AQ15172 486 aa19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 IL17AQ16552 155 aa19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 UPP1Q16831 310 aa19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 DCAF4L1Q3SXM0 396 aa19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 TAS1R3Q7RTX0 852 aa19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 TMEM130Q8N3G9 435 aa19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 DDX27Q96GQ7 796 aaKnown RBP19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 IFT74Q96LB3 600 aa19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 ZMAT2Q96NC0 199 aaKnown RBP19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 CDT1Q9H211 546 aa19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 LRWD1Q9UFC0 647 aa19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 FANCMQ8IYD8 2048 aa19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 DCHS1Q96JQ0 3298 aa19.68■□□□□ 0.74
PRPF40B-215ENST00000551418 MIA3Q5JRA6 1907 aa19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 TMEM189-UBE2V1I3L0A0 370 aa19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 K7ERI5 159 aa19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 SP9P0CG40 484 aa19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 CD72P21854 359 aa19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 HOXA9P31269 272 aa19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 PEX3P56589 373 aa19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 STARD6P59095 220 aa19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 SLC5A9Q2M3M2 681 aa19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 ALKAL1Q6UXT8 129 aa19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 KCNK18Q7Z418 384 aa19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 NPAS3Q8IXF0 933 aa19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 MAML2Q8IZL2 1156 aaPredicted RBP19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 PJA1Q8NG27 643 aa19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 KCNG4Q8TDN1 519 aa19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 ACO2Q99798 780 aaKnown RBP19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 TARS2Q9BW92 718 aaKnown RBP19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 PLA2G2FQ9BZM2 168 aa19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 PTPRHQ9HD43 1115 aa19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 TNFSF13BQ9Y275 285 aa19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 PCDHB6Q9Y5E3 794 aa19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 ZFP37Q9Y6Q3 630 aaPredicted RBP19.67■□□□□ 0.74
PRPF40B-215ENST00000551418 CCDC169A6NNP5 214 aa19.66■□□□□ 0.74
PRPF40B-215ENST00000551418 NRG2O14511 850 aaPredicted RBP19.66■□□□□ 0.74
PRPF40B-215ENST00000551418 XYLBO75191 536 aa19.66■□□□□ 0.74
PRPF40B-215ENST00000551418 NPTX2P47972 431 aa19.66■□□□□ 0.74
PRPF40B-215ENST00000551418 RBM25P49756 843 aaKnown RBP19.66■□□□□ 0.74
PRPF40B-215ENST00000551418 EFNA5P52803 228 aa19.66■□□□□ 0.74
PRPF40B-215ENST00000551418 MAPK7Q13164 816 aa19.66■□□□□ 0.74
PRPF40B-215ENST00000551418 ORC2Q13416 577 aaPredicted RBP19.66■□□□□ 0.74
PRPF40B-215ENST00000551418 XKR4Q5GH76 650 aa19.66■□□□□ 0.74
PRPF40B-215ENST00000551418 C1orf210Q8IVY1 113 aa19.66■□□□□ 0.74
PRPF40B-215ENST00000551418 KIFAP3Q92845 792 aa19.66■□□□□ 0.74
PRPF40B-215ENST00000551418 MCRS1Q96EZ8 462 aa19.66■□□□□ 0.74
PRPF40B-215ENST00000551418 RUSC1Q9BVN2 902 aa19.66■□□□□ 0.74
PRPF40B-215ENST00000551418 SFI1A8K8P3 1242 aa19.65■□□□□ 0.74
PRPF40B-215ENST00000551418 ABLIM1O14639 778 aa19.65■□□□□ 0.74
PRPF40B-215ENST00000551418 HIP1RO75146 1068 aa19.65■□□□□ 0.74
PRPF40B-215ENST00000551418 MUTP22033 750 aa19.65■□□□□ 0.74
PRPF40B-215ENST00000551418 GRM5P41594 1212 aa19.65■□□□□ 0.74
PRPF40B-215ENST00000551418 PTGDRQ13258 359 aa19.65■□□□□ 0.74
PRPF40B-215ENST00000551418 UVSSAQ2YD98 709 aa19.65■□□□□ 0.74
PRPF40B-215ENST00000551418 PABPC1LQ4VXU2 614 aaKnown RBP19.65■□□□□ 0.74
PRPF40B-215ENST00000551418 SLC44A4Q53GD3 710 aa19.65■□□□□ 0.74
PRPF40B-215ENST00000551418 HAUS3Q68CZ6 603 aa19.65■□□□□ 0.74
PRPF40B-215ENST00000551418 PDXDC1Q6P996 788 aa19.65■□□□□ 0.74
PRPF40B-215ENST00000551418 IGSF22Q8N9C0 903 aa19.65■□□□□ 0.74
PRPF40B-215ENST00000551418 SNX29Q8TEQ0 813 aa19.65■□□□□ 0.74
PRPF40B-215ENST00000551418 C18orf25Q96B23 403 aaPredicted RBP19.65■□□□□ 0.74
PRPF40B-215ENST00000551418 ZBTB45Q96K62 511 aaPredicted RBP19.65■□□□□ 0.74
PRPF40B-215ENST00000551418 KIF2CQ99661 725 aa19.65■□□□□ 0.74
PRPF40B-215ENST00000551418 LLPHQ9BRT6 129 aaKnown RBP19.65■□□□□ 0.74
PRPF40B-215ENST00000551418 BACE2Q9Y5Z0 518 aa19.65■□□□□ 0.74
PRPF40B-215ENST00000551418 SEC24AO95486 1093 aa19.64■□□□□ 0.73
PRPF40B-215ENST00000551418 LMNAP02545 664 aaKnown RBP19.64■□□□□ 0.73
PRPF40B-215ENST00000551418 ZNF568Q3ZCX4 644 aa19.64■□□□□ 0.73
PRPF40B-215ENST00000551418 SEZ6Q53EL9 994 aa19.64■□□□□ 0.73
PRPF40B-215ENST00000551418 MMTAG2Q9BU76 263 aaKnown RBP19.64■□□□□ 0.73
PRPF40B-215ENST00000551418 DDX23Q9BUQ8 820 aaKnown RBP19.64■□□□□ 0.73
PRPF40B-215ENST00000551418 CITO14578 2027 aa19.64■□□□□ 0.73
PRPF40B-215ENST00000551418 KANSL1LA0AUZ9 987 aa19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 RHOP08100 348 aa19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 ID4P47928 161 aa19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 ARPP19P56211 112 aa19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 ROR1Q01973 937 aa19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 GNL2Q13823 731 aaKnown RBP19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 PDIA5Q14554 519 aa19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 MLF2Q15773 248 aaPredicted RBP19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 VARS2Q5ST30 1063 aaKnown RBP19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 RINT1Q6NUQ1 792 aa19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 ANKS3Q6ZW76 656 aa19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 C1orf186Q6ZWK4 172 aa19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 MTSS1LQ765P7 747 aa19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 DCLK2Q8N568 766 aa19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 UROC1Q96N76 676 aa19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 CCDC94Q9BW85 323 aaPredicted RBP19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 ARHGAP28Q9P2N2 729 aa19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 MRPS23Q9Y3D9 190 aaKnown RBP19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 OTOGLQ3ZCN5 2332 aa19.63■□□□□ 0.73
PRPF40B-215ENST00000551418 WDR27A2RRH5 827 aa19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 SHISA7A6NL88 538 aa19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 PODXLO00592 558 aa19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 SLC16A4O15374 487 aa19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 TBC1D4O60343 1298 aa19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 ABLIM3O94929 683 aa19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 POU2F2P09086 479 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms