RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 RPUSD2Q8IZ73 545 aaKnown RBP21.22■□□□□ 0.99
SSH1-209ENST00000551165 PCDHB18PQ96TA0 734 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 NUB1Q9Y5A7 615 aa21.22■□□□□ 0.99
SSH1-209ENST00000551165 ZEB2O60315 1214 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 CYBAP13498 195 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 AKR1A1P14550 325 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 GALCP54803 685 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 ADAM17P78536 824 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 NOGQ13253 232 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 MNS1Q8NEH6 495 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 TRIM58Q8NG06 486 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 C1orf112Q9NSG2 853 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 MBLAC1A4D2B0 266 aaPredicted RBP21.21■□□□□ 0.99
SSH1-209ENST00000551165 ZNF185O15231 689 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 PHACTR2O75167 634 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 GPR32O75388 356 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 TADA3O75528 432 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 PGK1P00558 417 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 C6orf222P0C671 652 aaPredicted RBP21.21■□□□□ 0.99
SSH1-209ENST00000551165 CYP2C9P11712 490 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 ANXA13P27216 316 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 PURAQ00577 322 aaKnown RBP21.21■□□□□ 0.99
SSH1-209ENST00000551165 NCOA4Q13772 614 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 PAPD7Q5XG87 772 aaKnown RBP21.21■□□□□ 0.99
SSH1-209ENST00000551165 DNAJB3Q8WWF6 145 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 NOX5Q96PH1 765 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 EPC1Q9H2F5 836 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 GOLPH3Q9H4A6 298 aa21.21■□□□□ 0.99
SSH1-209ENST00000551165 LUC7LQ9NQ29 371 aaKnown RBP21.21■□□□□ 0.99
SSH1-209ENST00000551165 ANK1P16157 1881 aa21.2■□□□□ 0.98
SSH1-209ENST00000551165 PALMO75781 387 aa21.2■□□□□ 0.98
SSH1-209ENST00000551165 CCDC172P0C7W6 258 aa21.2■□□□□ 0.98
SSH1-209ENST00000551165 TFAMQ00059 246 aaKnown RBP21.2■□□□□ 0.98
SSH1-209ENST00000551165 GCNT1Q02742 428 aa21.2■□□□□ 0.98
SSH1-209ENST00000551165 DEFB115Q30KQ5 88 aa21.2■□□□□ 0.98
SSH1-209ENST00000551165 WDR49Q8IV35 697 aa21.2■□□□□ 0.98
SSH1-209ENST00000551165 OSMRQ99650 979 aa21.2■□□□□ 0.98
SSH1-209ENST00000551165 Q9Y3F1 56 aa21.2■□□□□ 0.98
SSH1-209ENST00000551165 ZC3H11AO75152 810 aaKnown RBP eCLIP21.19■□□□□ 0.98
SSH1-209ENST00000551165 MMEP08473 750 aa21.19■□□□□ 0.98
SSH1-209ENST00000551165 H2AFZP0C0S5 128 aa21.19■□□□□ 0.98
SSH1-209ENST00000551165 STAG3L1P0CL83 205 aa21.19■□□□□ 0.98
SSH1-209ENST00000551165 KRT5P13647 590 aa21.19■□□□□ 0.98
SSH1-209ENST00000551165 ABCB4P21439 1286 aa21.19■□□□□ 0.98
SSH1-209ENST00000551165 WDR44Q5JSH3 913 aa21.19■□□□□ 0.98
SSH1-209ENST00000551165 C10orf76Q5T2E6 689 aa21.19■□□□□ 0.98
SSH1-209ENST00000551165 H2AFVQ71UI9 128 aa21.19■□□□□ 0.98
SSH1-209ENST00000551165 RNF10Q8N5U6 811 aaKnown RBP21.19■□□□□ 0.98
SSH1-209ENST00000551165 PSMB7Q99436 277 aa21.19■□□□□ 0.98
SSH1-209ENST00000551165 RNF186Q9NXI6 227 aa21.19■□□□□ 0.98
SSH1-209ENST00000551165 ALDH1A1P00352 501 aa21.19■□□□□ 0.98
SSH1-209ENST00000551165 ELNP15502 786 aa21.19■□□□□ 0.98
SSH1-209ENST00000551165 CYP11B1P15538 503 aa21.19■□□□□ 0.98
SSH1-209ENST00000551165 MYL6P60660 151 aa21.19■□□□□ 0.98
SSH1-209ENST00000551165 GRID2IPA4D2P6 1211 aa21.18■□□□□ 0.98
SSH1-209ENST00000551165 DUSP11O75319 330 aaKnown RBP21.18■□□□□ 0.98
SSH1-209ENST00000551165 FTCDO95954 541 aa21.18■□□□□ 0.98
SSH1-209ENST00000551165 VTI1AQ96AJ9 217 aa21.18■□□□□ 0.98
SSH1-209ENST00000551165 JRKLQ9Y4A0 524 aa21.18■□□□□ 0.98
SSH1-209ENST00000551165 SAR1BQ9Y6B6 198 aa21.18■□□□□ 0.98
SSH1-209ENST00000551165 LACTBL1A8MY62 500 aa21.18■□□□□ 0.98
SSH1-209ENST00000551165 CLSTN1O94985 981 aa21.18■□□□□ 0.98
SSH1-209ENST00000551165 ACO1P21399 889 aaKnown RBP21.18■□□□□ 0.98
SSH1-209ENST00000551165 NOP14P78316 857 aaKnown RBP21.18■□□□□ 0.98
SSH1-209ENST00000551165 FMO1Q01740 532 aa21.18■□□□□ 0.98
SSH1-209ENST00000551165 CACNB2Q08289 660 aaPredicted RBP21.18■□□□□ 0.98
SSH1-209ENST00000551165 PTPROQ16827 1216 aa21.18■□□□□ 0.98
SSH1-209ENST00000551165 GNASQ5JWF2 1037 aa21.18■□□□□ 0.98
SSH1-209ENST00000551165 TMEM40Q8WWA1 233 aa21.18■□□□□ 0.98
SSH1-209ENST00000551165 DDX1Q92499 740 aaKnown RBP21.18■□□□□ 0.98
SSH1-209ENST00000551165 ARHGEF26Q96DR7 871 aa21.18■□□□□ 0.98
SSH1-209ENST00000551165 CAPZA3Q96KX2 299 aa21.18■□□□□ 0.98
SSH1-209ENST00000551165 CXCL16Q9H2A7 254 aa21.18■□□□□ 0.98
SSH1-209ENST00000551165 ERLIN2O94905 339 aa21.17■□□□□ 0.98
SSH1-209ENST00000551165 NFICP08651 508 aa21.17■□□□□ 0.98
SSH1-209ENST00000551165 DUOXA2Q1HG44 320 aa21.17■□□□□ 0.98
SSH1-209ENST00000551165 MFSD14CQ5VZR4 134 aa21.17■□□□□ 0.98
SSH1-209ENST00000551165 CXCL17Q6UXB2 119 aa21.17■□□□□ 0.98
SSH1-209ENST00000551165 ZNF410Q86VK4 478 aa21.17■□□□□ 0.98
SSH1-209ENST00000551165 FMNL3Q8IVF7 1028 aa21.17■□□□□ 0.98
SSH1-209ENST00000551165 TXLNBQ8N3L3 684 aa21.17■□□□□ 0.98
SSH1-209ENST00000551165 ALS2CR12Q96Q35 445 aa21.17■□□□□ 0.98
SSH1-209ENST00000551165 TLR10Q9BXR5 811 aa21.17■□□□□ 0.98
SSH1-209ENST00000551165 THAP2Q9H0W7 228 aa21.17■□□□□ 0.98
SSH1-209ENST00000551165 RPF1Q9H9Y2 349 aaKnown RBP21.17■□□□□ 0.98
SSH1-209ENST00000551165 OSGEPQ9NPF4 335 aa21.17■□□□□ 0.98
SSH1-209ENST00000551165 CHORDC1Q9UHD1 332 aaPredicted RBP21.17■□□□□ 0.98
SSH1-209ENST00000551165 PACSIN2Q9UNF0 486 aaPredicted RBP21.17■□□□□ 0.98
SSH1-209ENST00000551165 A0A1B0GUA9 196 aa21.17■□□□□ 0.98
SSH1-209ENST00000551165 SMIM35A0A1B0GVV1 85 aa21.17■□□□□ 0.98
SSH1-209ENST00000551165 ANO9A1A5B4 782 aa21.17■□□□□ 0.98
SSH1-209ENST00000551165 MCF2P10911 925 aa21.17■□□□□ 0.98
SSH1-209ENST00000551165 HOXA11P31270 313 aaPredicted RBP21.17■□□□□ 0.98
SSH1-209ENST00000551165 CXCR5P32302 372 aa21.17■□□□□ 0.98
SSH1-209ENST00000551165 NOP2P46087 812 aaKnown RBP21.17■□□□□ 0.98
SSH1-209ENST00000551165 CUL2Q13617 745 aa21.17■□□□□ 0.98
SSH1-209ENST00000551165 HSP90AA2PQ14568 343 aaPredicted RBP21.17■□□□□ 0.98
SSH1-209ENST00000551165 TRPA1O75762 1119 aa21.16■□□□□ 0.98
SSH1-209ENST00000551165 CLTAP09496 248 aa21.16■□□□□ 0.98
SSH1-209ENST00000551165 CCND3P30281 292 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms